RNA–Protein interactions for RNA: ENST00000579214.1

TTC39C-206, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-206ENST00000579214 NRXN2Q9P2S2 1712 aa12.09□□□□□ -0.47
TTC39C-206ENST00000579214 PNMA6EA0A0J9YXQ4 647 aa12.09□□□□□ -0.47
TTC39C-206ENST00000579214 B4GALNT3Q6L9W6 998 aa12.09□□□□□ -0.47
TTC39C-206ENST00000579214 RPAP2Q8IXW5 612 aaPredicted RBP12.09□□□□□ -0.47
TTC39C-206ENST00000579214 RPGRQ92834 1020 aaKnown RBP12.09□□□□□ -0.47
TTC39C-206ENST00000579214 GREM2Q9H772 168 aa12.09□□□□□ -0.47
TTC39C-206ENST00000579214 SPON1Q9HCB6 807 aa12.09□□□□□ -0.47
TTC39C-206ENST00000579214 ANKRD18BA2A2Z9 1011 aa12.08□□□□□ -0.48
TTC39C-206ENST00000579214 ITGA6P23229 1130 aa12.08□□□□□ -0.48
TTC39C-206ENST00000579214 ATP8B2P98198 1209 aa12.08□□□□□ -0.48
TTC39C-206ENST00000579214 IFIT5Q13325 482 aaKnown RBP12.08□□□□□ -0.48
TTC39C-206ENST00000579214 OS9Q13438 667 aaPredicted RBP12.08□□□□□ -0.48
TTC39C-206ENST00000579214 CCDC57Q2TAC2 916 aa12.08□□□□□ -0.48
TTC39C-206ENST00000579214 RABL6Q3YEC7 729 aaPredicted RBP12.08□□□□□ -0.48
TTC39C-206ENST00000579214 SLC10A5Q5PT55 438 aa12.08□□□□□ -0.48
TTC39C-206ENST00000579214 TTLL11Q8NHH1 800 aa12.08□□□□□ -0.48
TTC39C-206ENST00000579214 BCL11AQ9H165 835 aa12.08□□□□□ -0.48
TTC39C-206ENST00000579214 RWDD1Q9H446 243 aaPredicted RBP12.08□□□□□ -0.48
TTC39C-206ENST00000579214 APBB1O00213 710 aa12.07□□□□□ -0.48
TTC39C-206ENST00000579214 PDE6BP35913 854 aa12.07□□□□□ -0.48
TTC39C-206ENST00000579214 RIC1Q4ADV7 1423 aa12.07□□□□□ -0.48
TTC39C-206ENST00000579214 C10orf71Q711Q0 1435 aa12.07□□□□□ -0.48
TTC39C-206ENST00000579214 DDX46Q7L014 1031 aaKnown RBP12.07□□□□□ -0.48
TTC39C-206ENST00000579214 C2CD5Q86YS7 1000 aa12.07□□□□□ -0.48
TTC39C-206ENST00000579214 SIRT2Q8IXJ6 389 aa12.07□□□□□ -0.48
TTC39C-206ENST00000579214 ANKRD31Q8N7Z5 1873 aa12.07□□□□□ -0.48
TTC39C-206ENST00000579214 BRIP1Q9BX63 1249 aa12.07□□□□□ -0.48
TTC39C-206ENST00000579214 SIL1Q9H173 461 aa12.07□□□□□ -0.48
TTC39C-206ENST00000579214 PA2G4Q9UQ80 394 aaKnown RBP12.07□□□□□ -0.48
TTC39C-206ENST00000579214 CSF1RP07333 972 aa12.06□□□□□ -0.48
TTC39C-206ENST00000579214 MTX1Q13505 466 aa12.06□□□□□ -0.48
TTC39C-206ENST00000579214 KLHDC4Q8TBB5 520 aa12.06□□□□□ -0.48
TTC39C-206ENST00000579214 ZNF622Q969S3 477 aaKnown RBP eCLIP12.06□□□□□ -0.48
TTC39C-206ENST00000579214 RBM17Q96I25 401 aaKnown RBP12.06□□□□□ -0.48
TTC39C-206ENST00000579214 ZNF594Q96JF6 807 aaPredicted RBP12.06□□□□□ -0.48
TTC39C-206ENST00000579214 CDC5LQ99459 802 aaKnown RBP12.06□□□□□ -0.48
TTC39C-206ENST00000579214 SEC31BQ9NQW1 1179 aa12.06□□□□□ -0.48
TTC39C-206ENST00000579214 SPEF2Q9C093 1822 aa12.05□□□□□ -0.48
TTC39C-206ENST00000579214 SURF6O75683 361 aaKnown RBP12.05□□□□□ -0.48
TTC39C-206ENST00000579214 CHRNA5P30532 468 aa12.05□□□□□ -0.48
TTC39C-206ENST00000579214 IGHMBP2P38935 993 aaKnown RBP12.05□□□□□ -0.48
TTC39C-206ENST00000579214 PTGER2P43116 358 aa12.05□□□□□ -0.48
TTC39C-206ENST00000579214 POLA2Q14181 598 aa12.05□□□□□ -0.48
TTC39C-206ENST00000579214 SF3B3Q15393 1217 aaKnown RBP12.05□□□□□ -0.48
TTC39C-206ENST00000579214 ANKRD18AQ8IVF6 992 aa12.05□□□□□ -0.48
TTC39C-206ENST00000579214 SSH3Q8TE77 659 aa12.05□□□□□ -0.48
TTC39C-206ENST00000579214 EXOC6BQ9Y2D4 811 aa12.05□□□□□ -0.48
TTC39C-206ENST00000579214 COL11A2P13942 1736 aaPredicted RBP12.05□□□□□ -0.48
TTC39C-206ENST00000579214 H0YIN7 160 aa12.04□□□□□ -0.48
TTC39C-206ENST00000579214 IGHDP01880 384 aa12.04□□□□□ -0.48
TTC39C-206ENST00000579214 NPR1P16066 1061 aa12.04□□□□□ -0.48
TTC39C-206ENST00000579214 G3BP1Q13283 466 aaKnown RBP eCLIP12.04□□□□□ -0.48
TTC39C-206ENST00000579214 HDAC1Q13547 482 aaPredicted RBP12.04□□□□□ -0.48
TTC39C-206ENST00000579214 MPHOSPH8Q99549 860 aa12.04□□□□□ -0.48
TTC39C-206ENST00000579214 SGIP1Q9BQI5 828 aa12.04□□□□□ -0.48
TTC39C-206ENST00000579214 CNNM1Q9NRU3 951 aa12.04□□□□□ -0.48
TTC39C-206ENST00000579214 ZBTB47Q9UFB7 747 aaPredicted RBP12.04□□□□□ -0.48
TTC39C-206ENST00000579214 RTL9Q8NET4 1388 aa12.04□□□□□ -0.48
TTC39C-206ENST00000579214 RFX5P48382 616 aaPredicted RBP12.03□□□□□ -0.48
TTC39C-206ENST00000579214 GRAPQ13588 217 aa12.03□□□□□ -0.48
TTC39C-206ENST00000579214 GRAPLQ8TC17 118 aaPredicted RBP12.03□□□□□ -0.48
TTC39C-206ENST00000579214 MASTLQ96GX5 879 aa12.03□□□□□ -0.48
TTC39C-206ENST00000579214 WWC3Q9ULE0 1092 aa12.03□□□□□ -0.48
TTC39C-206ENST00000579214 TAF1P21675 1872 aa12.03□□□□□ -0.48
TTC39C-206ENST00000579214 CACNA1SQ13698 1873 aa12.02□□□□□ -0.48
TTC39C-206ENST00000579214 SRGNP10124 158 aa12.02□□□□□ -0.49
TTC39C-206ENST00000579214 DPEP1P16444 411 aa12.02□□□□□ -0.49
TTC39C-206ENST00000579214 PTPN12Q05209 780 aaKnown RBP12.02□□□□□ -0.49
TTC39C-206ENST00000579214 CRY2Q49AN0 593 aa12.02□□□□□ -0.49
TTC39C-206ENST00000579214 HSP90AB4PQ58FF6 505 aa12.02□□□□□ -0.49
TTC39C-206ENST00000579214 LDHAL6AQ6ZMR3 332 aa12.02□□□□□ -0.49
TTC39C-206ENST00000579214 CENPQQ7L2Z9 268 aaPredicted RBP12.02□□□□□ -0.49
TTC39C-206ENST00000579214 CELF1Q92879 486 aaKnown RBP12.02□□□□□ -0.49
TTC39C-206ENST00000579214 PUS3Q9BZE2 481 aaKnown RBP12.02□□□□□ -0.49
TTC39C-206ENST00000579214 PDZRN3Q9UPQ7 1066 aa12.02□□□□□ -0.49
TTC39C-206ENST00000579214 A0A0G2JLW4 131 aa12.01□□□□□ -0.49
TTC39C-206ENST00000579214 KLRG2A4D1S0 409 aaPredicted RBP12.01□□□□□ -0.49
TTC39C-206ENST00000579214 EYA2O00167 538 aa12.01□□□□□ -0.49
TTC39C-206ENST00000579214 RPS8P62241 208 aaKnown RBP12.01□□□□□ -0.49
TTC39C-206ENST00000579214 LRRC24Q50LG9 513 aa12.01□□□□□ -0.49
TTC39C-206ENST00000579214 METTL24Q5JXM2 366 aa12.01□□□□□ -0.49
TTC39C-206ENST00000579214 STYK1Q6J9G0 422 aa12.01□□□□□ -0.49
TTC39C-206ENST00000579214 COPRSQ9NQ92 184 aa12.01□□□□□ -0.49
TTC39C-206ENST00000579214 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
TTC39C-206ENST00000579214 LRP5O75197 1615 aa12□□□□□ -0.49
TTC39C-206ENST00000579214 COL4A1P02462 1669 aa12□□□□□ -0.49
TTC39C-206ENST00000579214 KIF13BQ9NQT8 1826 aa12□□□□□ -0.49
TTC39C-206ENST00000579214 PPEF1O14829 653 aaPredicted RBP12□□□□□ -0.49
TTC39C-206ENST00000579214 ALDH1B1P30837 517 aa12□□□□□ -0.49
TTC39C-206ENST00000579214 HOXA10P31260 410 aaPredicted RBP12□□□□□ -0.49
TTC39C-206ENST00000579214 ANKRD45Q5TZF3 282 aa12□□□□□ -0.49
TTC39C-206ENST00000579214 ERC1Q8IUD2 1116 aa12□□□□□ -0.49
TTC39C-206ENST00000579214 CNKSR1Q969H4 720 aa12□□□□□ -0.49
TTC39C-206ENST00000579214 GCC1Q96CN9 775 aa12□□□□□ -0.49
TTC39C-206ENST00000579214 CRAMP1Q96RY5 1269 aa12□□□□□ -0.49
TTC39C-206ENST00000579214 DCTPP1Q9H773 170 aa12□□□□□ -0.49
TTC39C-206ENST00000579214 CD2APQ9Y5K6 639 aa12□□□□□ -0.49
TTC39C-206ENST00000579214 SMARCA5O60264 1052 aaPredicted RBP11.99□□□□□ -0.49
TTC39C-206ENST00000579214 RAB11FIP3O75154 756 aa11.99□□□□□ -0.49
TTC39C-206ENST00000579214 CIAO1O76071 339 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms