RNA–Protein interactions for RNA: ENST00000578830.5

NUP85-208, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-208	ENST00000578830	NYX	Q9GZU5	481 aa		11.66	□□□□□ -0.54
NUP85-208	ENST00000578830	HTATSF1	O43719	755 aa	Known RBP	11.65	□□□□□ -0.54
NUP85-208	ENST00000578830	PLCG2	P16885	1265 aa		11.65	□□□□□ -0.54
NUP85-208	ENST00000578830	EIF6	P56537	245 aa	Known RBP	11.65	□□□□□ -0.54
NUP85-208	ENST00000578830	CNGB1	Q14028	1251 aa	Predicted RBP	11.65	□□□□□ -0.54
NUP85-208	ENST00000578830	HLF	Q16534	295 aa		11.65	□□□□□ -0.54
NUP85-208	ENST00000578830	GRIPAP1	Q4V328	841 aa		11.65	□□□□□ -0.54
NUP85-208	ENST00000578830	ABT1	Q9ULW3	272 aa	Known RBP	11.65	□□□□□ -0.54
NUP85-208	ENST00000578830	NUDC	Q9Y266	331 aa		11.65	□□□□□ -0.54
NUP85-208	ENST00000578830	RIC1	Q4ADV7	1423 aa		11.65	□□□□□ -0.54
NUP85-208	ENST00000578830	TAF1	P21675	1872 aa		11.65	□□□□□ -0.54
NUP85-208	ENST00000578830	PDE4DIP	Q5VU43	2346 aa		11.65	□□□□□ -0.54
NUP85-208	ENST00000578830	LMOD1	P29536	600 aa	Predicted RBP	11.64	□□□□□ -0.55
NUP85-208	ENST00000578830	RNF25	Q96BH1	459 aa	Predicted RBP	11.64	□□□□□ -0.55
NUP85-208	ENST00000578830	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
NUP85-208	ENST00000578830	ABCC12	Q96J65	1359 aa		11.64	□□□□□ -0.55
NUP85-208	ENST00000578830	AKAP11	Q9UKA4	1901 aa		11.64	□□□□□ -0.55
NUP85-208	ENST00000578830	ERVV-1	B6SEH8	477 aa		11.63	□□□□□ -0.55
NUP85-208	ENST00000578830	ANP32C	O43423	234 aa		11.63	□□□□□ -0.55
NUP85-208	ENST00000578830	HOXA10	P31260	410 aa	Predicted RBP	11.63	□□□□□ -0.55
NUP85-208	ENST00000578830	DCTN1	Q14203	1278 aa		11.63	□□□□□ -0.55
NUP85-208	ENST00000578830	TAF7	Q15545	349 aa	Predicted RBP	11.63	□□□□□ -0.55
NUP85-208	ENST00000578830	ABHD8	Q96I13	439 aa		11.63	□□□□□ -0.55
NUP85-208	ENST00000578830	GJA3	Q9Y6H8	435 aa		11.63	□□□□□ -0.55
NUP85-208	ENST00000578830	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.63	□□□□□ -0.55
NUP85-208	ENST00000578830	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.62	□□□□□ -0.55
NUP85-208	ENST00000578830	ECE1	P42892	770 aa		11.62	□□□□□ -0.55
NUP85-208	ENST00000578830	SCNN1D	P51172	638 aa		11.62	□□□□□ -0.55
NUP85-208	ENST00000578830	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
NUP85-208	ENST00000578830	GOLGA2	Q08379	1002 aa		11.62	□□□□□ -0.55
NUP85-208	ENST00000578830	USP50	Q70EL3	339 aa	Predicted RBP	11.62	□□□□□ -0.55
NUP85-208	ENST00000578830	NUTM1	Q86Y26	1132 aa		11.62	□□□□□ -0.55
NUP85-208	ENST00000578830	RPGR	Q92834	1020 aa	Known RBP	11.62	□□□□□ -0.55
NUP85-208	ENST00000578830	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.62	□□□□□ -0.55
NUP85-208	ENST00000578830	MAP3K15	Q6ZN16	1313 aa		11.61	□□□□□ -0.55
NUP85-208	ENST00000578830	EPS15	P42566	896 aa		11.61	□□□□□ -0.55
NUP85-208	ENST00000578830	KIF6	Q6ZMV9	814 aa		11.61	□□□□□ -0.55
NUP85-208	ENST00000578830	MAMSTR	Q6ZN01	415 aa		11.61	□□□□□ -0.55
NUP85-208	ENST00000578830	LARGE2	Q8N3Y3	721 aa		11.61	□□□□□ -0.55
NUP85-208	ENST00000578830	CAPNS2	Q96L46	248 aa		11.61	□□□□□ -0.55
NUP85-208	ENST00000578830	OCEL1	Q9H607	264 aa		11.61	□□□□□ -0.55
NUP85-208	ENST00000578830	SCUBE2	Q9NQ36	999 aa		11.61	□□□□□ -0.55
NUP85-208	ENST00000578830	MKRN3	Q13064	507 aa	Known RBP	11.6	□□□□□ -0.55
NUP85-208	ENST00000578830	CST9	Q5W186	159 aa		11.6	□□□□□ -0.55
NUP85-208	ENST00000578830	PNISR	Q8TF01	805 aa	Known RBP	11.6	□□□□□ -0.55
NUP85-208	ENST00000578830	RBM17	Q96I25	401 aa	Known RBP	11.6	□□□□□ -0.55
NUP85-208	ENST00000578830	GPR101	Q96P66	508 aa	Predicted RBP	11.6	□□□□□ -0.55
NUP85-208	ENST00000578830	CRAMP1	Q96RY5	1269 aa		11.6	□□□□□ -0.55
NUP85-208	ENST00000578830	BEGAIN	Q9BUH8	593 aa		11.6	□□□□□ -0.55
NUP85-208	ENST00000578830	PPEF1	O14829	653 aa	Predicted RBP	11.59	□□□□□ -0.55
NUP85-208	ENST00000578830	SLC34A2	O95436	690 aa		11.59	□□□□□ -0.55
NUP85-208	ENST00000578830	PPP2R1A	P30153	589 aa		11.59	□□□□□ -0.55
NUP85-208	ENST00000578830	FMR1	Q06787	632 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
NUP85-208	ENST00000578830	FAM161A	Q3B820	660 aa		11.59	□□□□□ -0.55
NUP85-208	ENST00000578830	CYP4F22	Q6NT55	531 aa		11.59	□□□□□ -0.55
NUP85-208	ENST00000578830	TTLL7	Q6ZT98	887 aa		11.59	□□□□□ -0.55
NUP85-208	ENST00000578830	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.59	□□□□□ -0.55
NUP85-208	ENST00000578830	NGEF	Q8N5V2	710 aa		11.59	□□□□□ -0.55
NUP85-208	ENST00000578830	VPS33B	Q9H267	617 aa		11.59	□□□□□ -0.55
NUP85-208	ENST00000578830	MIS18A	Q9NYP9	233 aa		11.59	□□□□□ -0.55
NUP85-208	ENST00000578830	TLL2	Q9Y6L7	1015 aa		11.59	□□□□□ -0.55
NUP85-208	ENST00000578830	UBN2	Q6ZU65	1347 aa		11.59	□□□□□ -0.55
NUP85-208	ENST00000578830	TRAF5	O00463	557 aa		11.58	□□□□□ -0.56
NUP85-208	ENST00000578830	RIOK3	O14730	519 aa	Known RBP	11.58	□□□□□ -0.56
NUP85-208	ENST00000578830	GPT	P24298	496 aa		11.58	□□□□□ -0.56
NUP85-208	ENST00000578830	MAP2K2	P36507	400 aa		11.58	□□□□□ -0.56
NUP85-208	ENST00000578830	SUSD4	Q5VX71	490 aa		11.58	□□□□□ -0.56
NUP85-208	ENST00000578830	NIM1K	Q8IY84	436 aa		11.58	□□□□□ -0.56
NUP85-208	ENST00000578830	ZNF34	Q8IZ26	560 aa		11.58	□□□□□ -0.56
NUP85-208	ENST00000578830	ADARB2	Q9NS39	739 aa	Known RBP	11.58	□□□□□ -0.56
NUP85-208	ENST00000578830	GPRC5D	Q9NZD1	345 aa		11.58	□□□□□ -0.56
NUP85-208	ENST00000578830	RRP7A	Q9Y3A4	280 aa	Known RBP	11.58	□□□□□ -0.56
NUP85-208	ENST00000578830	LRRC37A	A6NMS7	1700 aa		11.57	□□□□□ -0.56
NUP85-208	ENST00000578830	DDX60	Q8IY21	1712 aa	Known RBP	11.57	□□□□□ -0.56
NUP85-208	ENST00000578830	PPIP5K2	O43314	1243 aa		11.57	□□□□□ -0.56
NUP85-208	ENST00000578830	NTSR2	O95665	410 aa		11.57	□□□□□ -0.56
NUP85-208	ENST00000578830	MYL6B	P14649	208 aa		11.57	□□□□□ -0.56
NUP85-208	ENST00000578830	RGS19	P49795	217 aa		11.57	□□□□□ -0.56
NUP85-208	ENST00000578830	EIF4A1	P60842	406 aa	Known RBP	11.57	□□□□□ -0.56
NUP85-208	ENST00000578830	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.57	□□□□□ -0.56
NUP85-208	ENST00000578830	PDCD7	Q8N8D1	485 aa	Known RBP	11.57	□□□□□ -0.56
NUP85-208	ENST00000578830	TMX4	Q9H1E5	349 aa	Predicted RBP	11.57	□□□□□ -0.56
NUP85-208	ENST00000578830	ZBTB3	Q9H5J0	574 aa		11.57	□□□□□ -0.56
NUP85-208	ENST00000578830	CCDC85C	A6NKD9	419 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	TCERG1	O14776	1098 aa	Known RBP	11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	CA12	O43570	354 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	NEFM	P07197	916 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	MLLT1	Q03111	559 aa	Predicted RBP	11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	GRM1	Q13255	1194 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	AOC3	Q16853	763 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	PARP10	Q53GL7	1025 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	PPP1R42	Q7Z4L9	355 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	SAPCD2	Q86UD0	394 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	SLC51A	Q86UW1	340 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	HHIPL1	Q96JK4	782 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	NLRP3	Q96P20	1036 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	ZNRF3	Q9ULT6	936 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	ATP6V0A2	Q9Y487	856 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	ERBB4	Q15303	1308 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.56	□□□□□ -0.56

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