RNA–Protein interactions for RNA: ENST00000578576.1

HS3ST3A1-202, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3A1, humanhuman

TSL 3 BASIC

Gene HS3ST3A1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1-202ENST00000578576 GJA3Q9Y6H8 435 aa18.23■□□□□ 0.51
HS3ST3A1-202ENST00000578576 COL4A1P02462 1669 aa18.22■□□□□ 0.51
HS3ST3A1-202ENST00000578576 AOC3Q16853 763 aa18.22■□□□□ 0.51
HS3ST3A1-202ENST00000578576 CELF1Q92879 486 aaKnown RBP18.22■□□□□ 0.51
HS3ST3A1-202ENST00000578576 METTL22Q9BUU2 404 aaPredicted RBP18.22■□□□□ 0.51
HS3ST3A1-202ENST00000578576 SPINK5Q9NQ38 1064 aaPredicted RBP18.22■□□□□ 0.51
HS3ST3A1-202ENST00000578576 IL16Q14005 1332 aa18.22■□□□□ 0.51
HS3ST3A1-202ENST00000578576 FANCIQ9NVI1 1328 aa18.22■□□□□ 0.51
HS3ST3A1-202ENST00000578576 PI4KAP2A4QPH2 592 aa18.21■□□□□ 0.51
HS3ST3A1-202ENST00000578576 PPIP5K2O43314 1243 aa18.21■□□□□ 0.51
HS3ST3A1-202ENST00000578576 SLC4A2P04920 1241 aa18.21■□□□□ 0.51
HS3ST3A1-202ENST00000578576 MPNDQ8N594 471 aa18.21■□□□□ 0.51
HS3ST3A1-202ENST00000578576 PI4KAP1Q8N8J0 262 aa18.21■□□□□ 0.51
HS3ST3A1-202ENST00000578576 L3MBTL3Q96JM7 780 aaPredicted RBP18.21■□□□□ 0.51
HS3ST3A1-202ENST00000578576 STK31Q9BXU1 1019 aa18.21■□□□□ 0.51
HS3ST3A1-202ENST00000578576 TAF1DQ9H5J8 278 aaPredicted RBP18.21■□□□□ 0.51
HS3ST3A1-202ENST00000578576 DDX58O95786 925 aaKnown RBP18.2■□□□□ 0.5
HS3ST3A1-202ENST00000578576 EIF6P56537 245 aaKnown RBP18.2■□□□□ 0.5
HS3ST3A1-202ENST00000578576 EXOSC9Q06265 439 aaKnown RBP18.2■□□□□ 0.5
HS3ST3A1-202ENST00000578576 SF3B3Q15393 1217 aaKnown RBP18.2■□□□□ 0.5
HS3ST3A1-202ENST00000578576 GRIPAP1Q4V328 841 aa18.2■□□□□ 0.5
HS3ST3A1-202ENST00000578576 EAPPQ56P03 285 aaPredicted RBP18.2■□□□□ 0.5
HS3ST3A1-202ENST00000578576 DPP8Q6V1X1 898 aaPredicted RBP18.2■□□□□ 0.5
HS3ST3A1-202ENST00000578576 KSR2Q6VAB6 950 aa18.2■□□□□ 0.5
HS3ST3A1-202ENST00000578576 WDR63Q8IWG1 891 aa18.2■□□□□ 0.5
HS3ST3A1-202ENST00000578576 ZBTB38Q8NAP3 1195 aaPredicted RBP18.2■□□□□ 0.5
HS3ST3A1-202ENST00000578576 CCDC85AQ96PX6 553 aaPredicted RBP18.2■□□□□ 0.5
HS3ST3A1-202ENST00000578576 SCN4AP35499 1836 aa18.2■□□□□ 0.5
HS3ST3A1-202ENST00000578576 CHADLQ6NUI6 762 aa18.19■□□□□ 0.5
HS3ST3A1-202ENST00000578576 NIM1KQ8IY84 436 aa18.19■□□□□ 0.5
HS3ST3A1-202ENST00000578576 SEC31BQ9NQW1 1179 aa18.19■□□□□ 0.5
HS3ST3A1-202ENST00000578576 CWC25Q9NXE8 425 aaPredicted RBP18.19■□□□□ 0.5
HS3ST3A1-202ENST00000578576 HACL1Q9UJ83 578 aa18.19■□□□□ 0.5
HS3ST3A1-202ENST00000578576 IQCA1LA6NCM1 817 aa18.18■□□□□ 0.5
HS3ST3A1-202ENST00000578576 VAMP4O75379 141 aa18.18■□□□□ 0.5
HS3ST3A1-202ENST00000578576 IGKV5-2P06315 115 aa18.18■□□□□ 0.5
HS3ST3A1-202ENST00000578576 CWF19L2Q2TBE0 894 aaKnown RBP18.18■□□□□ 0.5
HS3ST3A1-202ENST00000578576 NCBP3Q53F19 620 aaKnown RBP18.18■□□□□ 0.5
HS3ST3A1-202ENST00000578576 GPC2Q8N158 579 aa18.18■□□□□ 0.5
HS3ST3A1-202ENST00000578576 CCDC191Q8NCU4 936 aa18.18■□□□□ 0.5
HS3ST3A1-202ENST00000578576 CHMP4AQ9BY43 222 aa18.18■□□□□ 0.5
HS3ST3A1-202ENST00000578576 CLEC11AQ9Y240 323 aa18.18■□□□□ 0.5
HS3ST3A1-202ENST00000578576 PCCAP05165 728 aaPredicted RBP18.17■□□□□ 0.5
HS3ST3A1-202ENST00000578576 EPHX2P34913 555 aa18.17■□□□□ 0.5
HS3ST3A1-202ENST00000578576 RTFDC1Q9BY42 306 aaPredicted RBP18.17■□□□□ 0.5
HS3ST3A1-202ENST00000578576 RPS8P62241 208 aaKnown RBP18.16■□□□□ 0.5
HS3ST3A1-202ENST00000578576 SUPT20HQ8NEM7 779 aa18.16■□□□□ 0.5
HS3ST3A1-202ENST00000578576 CREBZFQ9NS37 354 aa18.16■□□□□ 0.5
HS3ST3A1-202ENST00000578576 NSFL1CQ9UNZ2 370 aaKnown RBP18.16■□□□□ 0.5
HS3ST3A1-202ENST00000578576 FOXN1O15353 648 aa18.15■□□□□ 0.5
HS3ST3A1-202ENST00000578576 PDE8AO60658 829 aa18.15■□□□□ 0.5
HS3ST3A1-202ENST00000578576 EPS15P42566 896 aa18.15■□□□□ 0.5
HS3ST3A1-202ENST00000578576 GPSM2P81274 684 aa18.15■□□□□ 0.5
HS3ST3A1-202ENST00000578576 CXCL9Q07325 125 aa18.15■□□□□ 0.5
HS3ST3A1-202ENST00000578576 GPR101Q96P66 508 aaPredicted RBP18.15■□□□□ 0.5
HS3ST3A1-202ENST00000578576 LTBP1Q14766 1721 aa18.15■□□□□ 0.5
HS3ST3A1-202ENST00000578576 RIMBP2O15034 1052 aa18.14■□□□□ 0.49
HS3ST3A1-202ENST00000578576 RAD17O75943 681 aa18.14■□□□□ 0.49
HS3ST3A1-202ENST00000578576 FLIIQ13045 1269 aa18.14■□□□□ 0.49
HS3ST3A1-202ENST00000578576 LDHDQ86WU2 507 aa18.14■□□□□ 0.49
HS3ST3A1-202ENST00000578576 PRDM10Q9NQV6 1147 aa18.14■□□□□ 0.49
HS3ST3A1-202ENST00000578576 MKRN1Q9UHC7 482 aaKnown RBP18.14■□□□□ 0.49
HS3ST3A1-202ENST00000578576 ZNRF3Q9ULT6 936 aa18.14■□□□□ 0.49
HS3ST3A1-202ENST00000578576 C6orf229H3BNL8 230 aa18.13■□□□□ 0.49
HS3ST3A1-202ENST00000578576 SCNN1DP51172 638 aa18.13■□□□□ 0.49
HS3ST3A1-202ENST00000578576 KIAA2012Q0VF49 1180 aa18.13■□□□□ 0.49
HS3ST3A1-202ENST00000578576 NEXNQ0ZGT2 675 aa18.13■□□□□ 0.49
HS3ST3A1-202ENST00000578576 MAP1SQ66K74 1059 aaPredicted RBP18.13■□□□□ 0.49
HS3ST3A1-202ENST00000578576 TMC4Q7Z404 712 aa18.13■□□□□ 0.49
HS3ST3A1-202ENST00000578576 POLLQ9UGP5 575 aa18.13■□□□□ 0.49
HS3ST3A1-202ENST00000578576 CACNA1FO60840 1977 aa18.13■□□□□ 0.49
HS3ST3A1-202ENST00000578576 DUOX1Q9NRD9 1551 aa18.13■□□□□ 0.49
HS3ST3A1-202ENST00000578576 LRRC37AA6NMS7 1700 aa18.12■□□□□ 0.49
HS3ST3A1-202ENST00000578576 NEURL1BA8MQ27 555 aa18.12■□□□□ 0.49
HS3ST3A1-202ENST00000578576 FKBP5Q13451 457 aaPredicted RBP18.12■□□□□ 0.49
HS3ST3A1-202ENST00000578576 VPS33BQ9H267 617 aa18.12■□□□□ 0.49
HS3ST3A1-202ENST00000578576 CNTNAP1P78357 1384 aa18.12■□□□□ 0.49
HS3ST3A1-202ENST00000578576 YDJCA8MPS7 323 aa18.11■□□□□ 0.49
HS3ST3A1-202ENST00000578576 ITGBL1O95965 494 aaPredicted RBP18.11■□□□□ 0.49
HS3ST3A1-202ENST00000578576 LMOD1P29536 600 aaPredicted RBP18.11■□□□□ 0.49
HS3ST3A1-202ENST00000578576 WASHC4Q2M389 1173 aa18.11■□□□□ 0.49
HS3ST3A1-202ENST00000578576 CCDC152Q4G0S7 254 aa18.11■□□□□ 0.49
HS3ST3A1-202ENST00000578576 UBE3BQ7Z3V4 1068 aa18.11■□□□□ 0.49
HS3ST3A1-202ENST00000578576 DBNDD1Q9H9R9 158 aa18.11■□□□□ 0.49
HS3ST3A1-202ENST00000578576 CDHR2Q9BYE9 1310 aa18.1■□□□□ 0.49
HS3ST3A1-202ENST00000578576 F6X3S4 739 aa18.1■□□□□ 0.49
HS3ST3A1-202ENST00000578576 H7C1W4 665 aa18.1■□□□□ 0.49
HS3ST3A1-202ENST00000578576 DOK7Q18PE1 504 aa18.1■□□□□ 0.49
HS3ST3A1-202ENST00000578576 CIAPIN1Q6FI81 312 aa18.1■□□□□ 0.49
HS3ST3A1-202ENST00000578576 DNAAF4Q8WXU2 420 aa18.1■□□□□ 0.49
HS3ST3A1-202ENST00000578576 MYH16Q9H6N6 1097 aa18.1■□□□□ 0.49
HS3ST3A1-202ENST00000578576 KCNQ5Q9NR82 932 aa18.1■□□□□ 0.49
HS3ST3A1-202ENST00000578576 MYH3P11055 1940 aa18.1■□□□□ 0.49
HS3ST3A1-202ENST00000578576 SPEF2Q9C093 1822 aa18.09■□□□□ 0.49
HS3ST3A1-202ENST00000578576 ADAMTSL1Q8N6G6 1762 aa18.09■□□□□ 0.49
HS3ST3A1-202ENST00000578576 HSP90B1P14625 803 aaKnown RBP18.09■□□□□ 0.49
HS3ST3A1-202ENST00000578576 GMPSP49915 693 aaPredicted RBP18.09■□□□□ 0.49
HS3ST3A1-202ENST00000578576 CTSWP56202 376 aa18.09■□□□□ 0.49
HS3ST3A1-202ENST00000578576 FMR1Q06787 632 aaKnown RBP eCLIP18.09■□□□□ 0.49
HS3ST3A1-202ENST00000578576 PNMA8AQ86V59 439 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms