RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 USP16Q9Y5T5 823 aa9.98□□□□□ -0.81
SKA2-203ENST00000578105 ZNF335Q9H4Z2 1342 aaPredicted RBP9.98□□□□□ -0.81
SKA2-203ENST00000578105 NUP188Q5SRE5 1749 aa9.98□□□□□ -0.81
SKA2-203ENST00000578105 PRAMEF22A3QJZ6 481 aa9.97□□□□□ -0.81
SKA2-203ENST00000578105 H7C1W4 665 aa9.97□□□□□ -0.81
SKA2-203ENST00000578105 CD2BP2O95400 341 aaKnown RBP9.97□□□□□ -0.81
SKA2-203ENST00000578105 MYL6BP14649 208 aa9.97□□□□□ -0.81
SKA2-203ENST00000578105 NEK4P51957 841 aa9.97□□□□□ -0.81
SKA2-203ENST00000578105 TRIM28Q13263 835 aaKnown RBP9.97□□□□□ -0.81
SKA2-203ENST00000578105 AACSQ86V21 672 aa9.97□□□□□ -0.81
SKA2-203ENST00000578105 SPRYD3Q8NCJ5 442 aa9.97□□□□□ -0.81
SKA2-203ENST00000578105 KAZALD1Q96I82 304 aa9.97□□□□□ -0.81
SKA2-203ENST00000578105 SASH1O94885 1247 aa9.96□□□□□ -0.82
SKA2-203ENST00000578105 ATP5JP18859 108 aa9.96□□□□□ -0.82
SKA2-203ENST00000578105 NUBP1P53384 320 aa9.96□□□□□ -0.82
SKA2-203ENST00000578105 RNF20Q5VTR2 975 aa9.96□□□□□ -0.82
SKA2-203ENST00000578105 ZSCAN31Q96LW9 406 aaPredicted RBP9.96□□□□□ -0.82
SKA2-203ENST00000578105 LSG1Q9H089 658 aaKnown RBP9.96□□□□□ -0.82
SKA2-203ENST00000578105 CWC25Q9NXE8 425 aaPredicted RBP9.96□□□□□ -0.82
SKA2-203ENST00000578105 HMG20BQ9P0W2 317 aa9.96□□□□□ -0.82
SKA2-203ENST00000578105 SPEF2Q9C093 1822 aa9.96□□□□□ -0.82
SKA2-203ENST00000578105 A0A087WZG4 1122 aa9.95□□□□□ -0.82
SKA2-203ENST00000578105 GOLGA6L3A6NEY3 463 aa9.95□□□□□ -0.82
SKA2-203ENST00000578105 CIAO1O76071 339 aa9.95□□□□□ -0.82
SKA2-203ENST00000578105 ZKSCAN1P17029 563 aaPredicted RBP9.95□□□□□ -0.82
SKA2-203ENST00000578105 PSMA5P28066 241 aa9.95□□□□□ -0.82
SKA2-203ENST00000578105 RFX5P48382 616 aaPredicted RBP9.95□□□□□ -0.82
SKA2-203ENST00000578105 MRE11P49959 708 aa9.95□□□□□ -0.82
SKA2-203ENST00000578105 CASP7P55210 303 aa9.95□□□□□ -0.82
SKA2-203ENST00000578105 MKRN3Q13064 507 aaKnown RBP9.95□□□□□ -0.82
SKA2-203ENST00000578105 KLHL40Q2TBA0 621 aa9.95□□□□□ -0.82
SKA2-203ENST00000578105 LRRFIP1Q32MZ4 808 aaKnown RBP9.95□□□□□ -0.82
SKA2-203ENST00000578105 HSP90AB3PQ58FF7 597 aa9.95□□□□□ -0.82
SKA2-203ENST00000578105 UNC5CLQ8IV45 518 aa9.95□□□□□ -0.82
SKA2-203ENST00000578105 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.95□□□□□ -0.82
SKA2-203ENST00000578105 TMX3Q96JJ7 454 aa9.95□□□□□ -0.82
SKA2-203ENST00000578105 ALDH8A1Q9H2A2 487 aaPredicted RBP9.95□□□□□ -0.82
SKA2-203ENST00000578105 SH2B1Q9NRF2 756 aaPredicted RBP9.95□□□□□ -0.82
SKA2-203ENST00000578105 TMOD3Q9NYL9 352 aa9.95□□□□□ -0.82
SKA2-203ENST00000578105 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.95□□□□□ -0.82
SKA2-203ENST00000578105 DISP2A7MBM2 1401 aa9.95□□□□□ -0.82
SKA2-203ENST00000578105 ABCC12Q96J65 1359 aa9.94□□□□□ -0.82
SKA2-203ENST00000578105 JCADQ9P266 1359 aa9.94□□□□□ -0.82
SKA2-203ENST00000578105 FSD2A1L4K1 749 aa9.94□□□□□ -0.82
SKA2-203ENST00000578105 BAG4O95429 457 aaKnown RBP9.94□□□□□ -0.82
SKA2-203ENST00000578105 STARD3NLO95772 234 aa9.94□□□□□ -0.82
SKA2-203ENST00000578105 IL15P40933 162 aaPredicted RBP9.94□□□□□ -0.82
SKA2-203ENST00000578105 PTPN12Q05209 780 aaKnown RBP9.94□□□□□ -0.82
SKA2-203ENST00000578105 TSHZ3Q63HK5 1081 aa9.94□□□□□ -0.82
SKA2-203ENST00000578105 EAF2Q96CJ1 260 aaPredicted RBP9.94□□□□□ -0.82
SKA2-203ENST00000578105 PLA2G12BQ9BX93 195 aa9.94□□□□□ -0.82
SKA2-203ENST00000578105 THRAP3Q9Y2W1 955 aaKnown RBP9.94□□□□□ -0.82
SKA2-203ENST00000578105 CCDC171Q6TFL3 1326 aa9.93□□□□□ -0.82
SKA2-203ENST00000578105 KRT32Q14532 448 aa9.93□□□□□ -0.82
SKA2-203ENST00000578105 ANKRD1Q15327 319 aa9.93□□□□□ -0.82
SKA2-203ENST00000578105 TSGA10IPQ3SY00 556 aa9.93□□□□□ -0.82
SKA2-203ENST00000578105 TNNI3KQ59H18 835 aa9.93□□□□□ -0.82
SKA2-203ENST00000578105 VPS53Q5VIR6 699 aa9.93□□□□□ -0.82
SKA2-203ENST00000578105 CHMP4CQ96CF2 233 aa9.93□□□□□ -0.82
SKA2-203ENST00000578105 ISCA1Q9BUE6 129 aa9.93□□□□□ -0.82
SKA2-203ENST00000578105 BCL11AQ9H165 835 aa9.93□□□□□ -0.82
SKA2-203ENST00000578105 PA2G4Q9UQ80 394 aaKnown RBP9.93□□□□□ -0.82
SKA2-203ENST00000578105 SNX14Q9Y5W7 946 aa9.93□□□□□ -0.82
SKA2-203ENST00000578105 FPGT-TNNI3KV9GXZ4 949 aa9.93□□□□□ -0.82
SKA2-203ENST00000578105 WNK3Q9BYP7 1800 aa9.93□□□□□ -0.82
SKA2-203ENST00000578105 CDHR2Q9BYE9 1310 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 WDR33Q9C0J8 1336 aaKnown RBP9.92□□□□□ -0.82
SKA2-203ENST00000578105 NBPF26B4DH59 902 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 BRD1O95696 1058 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 MBD3O95983 291 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 TCIRG1Q13488 830 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 NECTIN1Q15223 517 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 NBPF14Q5TI25 921 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 NBPF10Q6P3W6 841 aaKnown RBP9.92□□□□□ -0.82
SKA2-203ENST00000578105 CWC27Q6UX04 472 aaKnown RBP9.92□□□□□ -0.82
SKA2-203ENST00000578105 KIF6Q6ZMV9 814 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 UBE3BQ7Z3V4 1068 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 NBPF15Q8N660 670 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 MAP4K1Q92918 833 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 TTC14Q96N46 770 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 PCDHB8Q9UN66 801 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 LIMCH1Q9UPQ0 1083 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 ATP6V1DQ9Y5K8 247 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 TJP1Q07157 1748 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 TOGARAM1Q9Y4F4 1720 aa9.92□□□□□ -0.82
SKA2-203ENST00000578105 CICQ96RK0 1608 aaPredicted RBP9.92□□□□□ -0.82
SKA2-203ENST00000578105 PALLDQ8WX93 1383 aa9.91□□□□□ -0.82
SKA2-203ENST00000578105 MED23Q9ULK4 1368 aa9.91□□□□□ -0.82
SKA2-203ENST00000578105 PCCAP05165 728 aaPredicted RBP9.91□□□□□ -0.82
SKA2-203ENST00000578105 SSFA2P28290 1259 aa9.91□□□□□ -0.82
SKA2-203ENST00000578105 FOXO4P98177 505 aa9.91□□□□□ -0.82
SKA2-203ENST00000578105 DPY19L2Q6NUT2 758 aa9.91□□□□□ -0.82
SKA2-203ENST00000578105 AK7Q96M32 723 aa9.91□□□□□ -0.82
SKA2-203ENST00000578105 HAUS7Q99871 368 aa9.91□□□□□ -0.82
SKA2-203ENST00000578105 FSD1Q9BTV5 496 aa9.91□□□□□ -0.82
SKA2-203ENST00000578105 ZSWIM6Q9HCJ5 1215 aa9.91□□□□□ -0.82
SKA2-203ENST00000578105 PALD1Q9ULE6 856 aa9.91□□□□□ -0.82
SKA2-203ENST00000578105 AKAP2Q9Y2D5 859 aa9.91□□□□□ -0.82
SKA2-203ENST00000578105 CYP46A1Q9Y6A2 500 aa9.91□□□□□ -0.82
SKA2-203ENST00000578105 BCL9O00512 1426 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms