RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 FSD1Q9BTV5 496 aa33.51■■■□□ 2.95
LIMD2-203ENST00000578067 TRMT112Q9UI30 125 aaKnown RBP33.51■■■□□ 2.95
LIMD2-203ENST00000578067 NEK4P51957 841 aa33.5■■■□□ 2.95
LIMD2-203ENST00000578067 PUS3Q9BZE2 481 aaKnown RBP33.5■■■□□ 2.95
LIMD2-203ENST00000578067 IFIT5Q13325 482 aaKnown RBP33.5■■■□□ 2.95
LIMD2-203ENST00000578067 NEUROD6Q96NK8 337 aa33.49■■■□□ 2.95
LIMD2-203ENST00000578067 UBN2Q6ZU65 1347 aa33.48■■■□□ 2.95
LIMD2-203ENST00000578067 IRS4O14654 1257 aaPredicted RBP33.48■■■□□ 2.95
LIMD2-203ENST00000578067 FOXD4L1Q9NU39 408 aa33.48■■■□□ 2.95
LIMD2-203ENST00000578067 NMIQ13287 307 aaPredicted RBP33.47■■■□□ 2.95
LIMD2-203ENST00000578067 TTLL11Q8NHH1 800 aa33.47■■■□□ 2.95
LIMD2-203ENST00000578067 CCDC85AQ96PX6 553 aaPredicted RBP33.47■■■□□ 2.95
LIMD2-203ENST00000578067 CEP126Q9P2H0 1117 aa33.47■■■□□ 2.95
LIMD2-203ENST00000578067 TAF7LQ5H9L4 462 aa33.46■■■□□ 2.95
LIMD2-203ENST00000578067 IL27Q8NEV9 243 aa33.46■■■□□ 2.95
LIMD2-203ENST00000578067 HAUS7Q99871 368 aa33.46■■■□□ 2.95
LIMD2-203ENST00000578067 ZNF609O15014 1411 aa33.46■■■□□ 2.95
LIMD2-203ENST00000578067 CTSWP56202 376 aa33.46■■■□□ 2.95
LIMD2-203ENST00000578067 TIMM10P62072 90 aa33.46■■■□□ 2.95
LIMD2-203ENST00000578067 FAM227BQ96M60 508 aa33.46■■■□□ 2.95
LIMD2-203ENST00000578067 MCM2P49736 904 aa33.45■■■□□ 2.95
LIMD2-203ENST00000578067 SNRKQ9NRH2 765 aa33.45■■■□□ 2.95
LIMD2-203ENST00000578067 ZNF831Q5JPB2 1677 aa33.44■■■□□ 2.94
LIMD2-203ENST00000578067 PDE8AO60658 829 aa33.44■■■□□ 2.94
LIMD2-203ENST00000578067 CAMTA2O94983 1202 aa33.44■■■□□ 2.94
LIMD2-203ENST00000578067 EDC3Q96F86 508 aaKnown RBP33.44■■■□□ 2.94
LIMD2-203ENST00000578067 A0A1B0GUL7 405 aa33.43■■■□□ 2.94
LIMD2-203ENST00000578067 PTH1RQ03431 593 aa33.43■■■□□ 2.94
LIMD2-203ENST00000578067 SNX14Q9Y5W7 946 aa33.43■■■□□ 2.94
LIMD2-203ENST00000578067 MEX3CQ5U5Q3 659 aaKnown RBP33.42■■■□□ 2.94
LIMD2-203ENST00000578067 DNAJC2Q99543 621 aaKnown RBP33.42■■■□□ 2.94
LIMD2-203ENST00000578067 AKAP2Q9Y2D5 859 aa33.42■■■□□ 2.94
LIMD2-203ENST00000578067 THSD7AQ9UPZ6 1657 aa33.42■■■□□ 2.94
LIMD2-203ENST00000578067 RFX7Q2KHR2 1363 aa33.42■■■□□ 2.94
LIMD2-203ENST00000578067 MYH14Q7Z406 1995 aaKnown RBP33.42■■■□□ 2.94
LIMD2-203ENST00000578067 ITGA6P23229 1130 aa33.41■■■□□ 2.94
LIMD2-203ENST00000578067 GREM2Q9H772 168 aa33.41■■■□□ 2.94
LIMD2-203ENST00000578067 ANKRD18BA2A2Z9 1011 aa33.41■■■□□ 2.94
LIMD2-203ENST00000578067 AK7Q96M32 723 aa33.41■■■□□ 2.94
LIMD2-203ENST00000578067 CCDC171Q6TFL3 1326 aa33.41■■■□□ 2.94
LIMD2-203ENST00000578067 COL5A3P25940 1745 aaPredicted RBP33.4■■■□□ 2.94
LIMD2-203ENST00000578067 A0A0D9SFI3 127 aa33.4■■■□□ 2.94
LIMD2-203ENST00000578067 SUSD4Q5VX71 490 aa33.4■■■□□ 2.94
LIMD2-203ENST00000578067 PARP10Q53GL7 1025 aa33.39■■■□□ 2.94
LIMD2-203ENST00000578067 HSPA1LP34931 641 aa33.38■■■□□ 2.93
LIMD2-203ENST00000578067 NDUFB9Q9Y6M9 179 aa33.38■■■□□ 2.93
LIMD2-203ENST00000578067 RASEFQ8IZ41 740 aa33.38■■■□□ 2.93
LIMD2-203ENST00000578067 LINC00116Q8NCU8 138 aa33.38■■■□□ 2.93
LIMD2-203ENST00000578067 UPF3BQ9BZI7 483 aaKnown RBP33.38■■■□□ 2.93
LIMD2-203ENST00000578067 MYH3P11055 1940 aa33.37■■■□□ 2.93
LIMD2-203ENST00000578067 SH3TC1Q8TE82 1336 aa33.37■■■□□ 2.93
LIMD2-203ENST00000578067 RAB3GAP1Q15042 981 aa33.37■■■□□ 2.93
LIMD2-203ENST00000578067 UTP14AQ9BVJ6 771 aaKnown RBP33.37■■■□□ 2.93
LIMD2-203ENST00000578067 RIPOR2Q9Y4F9 1068 aa33.37■■■□□ 2.93
LIMD2-203ENST00000578067 MED23Q9ULK4 1368 aa33.37■■■□□ 2.93
LIMD2-203ENST00000578067 LDHAL6AQ6ZMR3 332 aa33.36■■■□□ 2.93
LIMD2-203ENST00000578067 KCNB2Q92953 911 aa33.36■■■□□ 2.93
LIMD2-203ENST00000578067 GJD4Q96KN9 370 aaPredicted RBP33.36■■■□□ 2.93
LIMD2-203ENST00000578067 MAP4K1Q92918 833 aa33.36■■■□□ 2.93
LIMD2-203ENST00000578067 NECTIN1Q15223 517 aa33.35■■■□□ 2.93
LIMD2-203ENST00000578067 PTF1AQ7RTS3 328 aa33.35■■■□□ 2.93
LIMD2-203ENST00000578067 KBTBD3Q8NAB2 608 aa33.35■■■□□ 2.93
LIMD2-203ENST00000578067 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.35■■■□□ 2.93
LIMD2-203ENST00000578067 CWC22Q9HCG8 908 aaKnown RBP33.35■■■□□ 2.93
LIMD2-203ENST00000578067 DDX46Q7L014 1031 aaKnown RBP33.35■■■□□ 2.93
LIMD2-203ENST00000578067 TMX3Q96JJ7 454 aa33.35■■■□□ 2.93
LIMD2-203ENST00000578067 PAG1Q9NWQ8 432 aa33.35■■■□□ 2.93
LIMD2-203ENST00000578067 TICAM2Q86XR7 235 aa33.34■■■□□ 2.93
LIMD2-203ENST00000578067 IFIT1P09914 478 aaKnown RBP33.33■■■□□ 2.93
LIMD2-203ENST00000578067 MCM4P33991 863 aa33.33■■■□□ 2.93
LIMD2-203ENST00000578067 PRPF40BQ6NWY9 871 aaKnown RBP33.33■■■□□ 2.93
LIMD2-203ENST00000578067 ZNF652Q9Y2D9 606 aa33.33■■■□□ 2.93
LIMD2-203ENST00000578067 RBM8AQ9Y5S9 174 aaKnown RBP33.33■■■□□ 2.93
LIMD2-203ENST00000578067 METTL24Q5JXM2 366 aa33.33■■■□□ 2.93
LIMD2-203ENST00000578067 AEBP2Q6ZN18 517 aaPredicted RBP33.33■■■□□ 2.93
LIMD2-203ENST00000578067 NIP7Q9Y221 180 aaKnown RBP eCLIP33.33■■■□□ 2.93
LIMD2-203ENST00000578067 AFF2P51816 1311 aa33.32■■■□□ 2.92
LIMD2-203ENST00000578067 CNTNAP4Q9C0A0 1308 aa33.32■■■□□ 2.92
LIMD2-203ENST00000578067 RIC1Q4ADV7 1423 aa33.32■■■□□ 2.92
LIMD2-203ENST00000578067 CCDC158Q5M9N0 1113 aa33.32■■■□□ 2.92
LIMD2-203ENST00000578067 XAGE2Q96GT9 111 aa33.32■■■□□ 2.92
LIMD2-203ENST00000578067 CNNM1Q9NRU3 951 aa33.32■■■□□ 2.92
LIMD2-203ENST00000578067 GOLIM4O00461 696 aa33.31■■■□□ 2.92
LIMD2-203ENST00000578067 GORABQ5T7V8 394 aa33.31■■■□□ 2.92
LIMD2-203ENST00000578067 TNPO1Q92973 898 aaKnown RBP33.31■■■□□ 2.92
LIMD2-203ENST00000578067 FAM177BA6PVY3 158 aa33.31■■■□□ 2.92
LIMD2-203ENST00000578067 KCNJ4P48050 445 aa33.31■■■□□ 2.92
LIMD2-203ENST00000578067 CLEC4GQ6UXB4 293 aa33.31■■■□□ 2.92
LIMD2-203ENST00000578067 ZNF589Q86UQ0 364 aaPredicted RBP33.3■■■□□ 2.92
LIMD2-203ENST00000578067 NHSQ6T4R5 1651 aa33.3■■■□□ 2.92
LIMD2-203ENST00000578067 HCLS1P14317 486 aaPredicted RBP33.29■■■□□ 2.92
LIMD2-203ENST00000578067 KCNQ4P56696 695 aa33.29■■■□□ 2.92
LIMD2-203ENST00000578067 NTSR2O95665 410 aa33.29■■■□□ 2.92
LIMD2-203ENST00000578067 HSP90B1P14625 803 aaKnown RBP33.29■■■□□ 2.92
LIMD2-203ENST00000578067 ZKSCAN1P17029 563 aaPredicted RBP33.29■■■□□ 2.92
LIMD2-203ENST00000578067 ADORA1P30542 326 aa33.29■■■□□ 2.92
LIMD2-203ENST00000578067 CUL4AQ13619 759 aa33.29■■■□□ 2.92
LIMD2-203ENST00000578067 ATP2B3Q16720 1220 aa33.28■■■□□ 2.92
LIMD2-203ENST00000578067 TTC39AQ5SRH9 613 aa33.28■■■□□ 2.92
LIMD2-203ENST00000578067 CREB3L3Q68CJ9 461 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms