RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 CASQ1P31415 396 aa12.62□□□□□ -0.39
RNF43-203ENST00000577716 IQCA1Q86XH1 822 aa12.62□□□□□ -0.39
RNF43-203ENST00000577716 CTCFLQ8NI51 663 aaPredicted RBP12.62□□□□□ -0.39
RNF43-203ENST00000577716 LRRC59Q96AG4 307 aaKnown RBP12.62□□□□□ -0.39
RNF43-203ENST00000577716 LMBRD1Q9NUN5 540 aa12.62□□□□□ -0.39
RNF43-203ENST00000577716 KAT6BQ8WYB5 2073 aa12.62□□□□□ -0.39
RNF43-203ENST00000577716 UGGT1Q9NYU2 1555 aa12.61□□□□□ -0.39
RNF43-203ENST00000577716 TMX1Q9H3N1 280 aa12.61□□□□□ -0.39
RNF43-203ENST00000577716 POLR3GO15318 223 aaPredicted RBP12.61□□□□□ -0.39
RNF43-203ENST00000577716 SYKP43405 635 aa12.61□□□□□ -0.39
RNF43-203ENST00000577716 BICDL1Q6ZP65 573 aa12.61□□□□□ -0.39
RNF43-203ENST00000577716 PNMA6EA0A0J9YXQ4 647 aa12.61□□□□□ -0.39
RNF43-203ENST00000577716 PTGS1P23219 599 aa12.61□□□□□ -0.39
RNF43-203ENST00000577716 CCDC171Q6TFL3 1326 aa12.61□□□□□ -0.39
RNF43-203ENST00000577716 CHRNA2Q15822 529 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 RUFY3Q7L099 469 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 GBP3Q9H0R5 595 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 RNF41Q9H4P4 317 aaPredicted RBP12.6□□□□□ -0.39
RNF43-203ENST00000577716 AOPEPQ8N6M6 819 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 CCDC150Q8NCX0 1101 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 KCNG4Q8TDN1 519 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 BMP2KQ9NSY1 1161 aaPredicted RBP12.6□□□□□ -0.39
RNF43-203ENST00000577716 MAP3K5Q99683 1374 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 PREX2Q70Z35 1606 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 HSP90AB3PQ58FF7 597 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 JAKMIP3Q5VZ66 844 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 LUZP1Q86V48 1076 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 SLC26A6Q9BXS9 759 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 SLC5A1P13866 664 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 GSPT1P15170 499 aaKnown RBP12.6□□□□□ -0.39
RNF43-203ENST00000577716 ZFYVE27Q5T4F4 411 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 CCDC148Q8NFR7 591 aa12.6□□□□□ -0.39
RNF43-203ENST00000577716 GNG11P61952 73 aa12.59□□□□□ -0.39
RNF43-203ENST00000577716 FAM173BQ6P4H8 233 aa12.59□□□□□ -0.39
RNF43-203ENST00000577716 CDC42BPAQ5VT25 1732 aa12.59□□□□□ -0.39
RNF43-203ENST00000577716 SGSM2O43147 1006 aa12.59□□□□□ -0.39
RNF43-203ENST00000577716 DTNBO60941 627 aa12.59□□□□□ -0.39
RNF43-203ENST00000577716 UBASH3AP57075 661 aa12.59□□□□□ -0.39
RNF43-203ENST00000577716 CRACR2AQ9BSW2 395 aa12.59□□□□□ -0.39
RNF43-203ENST00000577716 MYO6Q9UM54 1294 aa12.59□□□□□ -0.39
RNF43-203ENST00000577716 KDM5DQ9BY66 1539 aa12.59□□□□□ -0.39
RNF43-203ENST00000577716 SBNO2Q9Y2G9 1366 aa12.59□□□□□ -0.39
RNF43-203ENST00000577716 ZFYP08048 801 aaPredicted RBP12.59□□□□□ -0.39
RNF43-203ENST00000577716 IQCEQ6IPM2 695 aa12.59□□□□□ -0.39
RNF43-203ENST00000577716 TXLNBQ8N3L3 684 aa12.59□□□□□ -0.39
RNF43-203ENST00000577716 TMEM63CQ9P1W3 806 aa12.59□□□□□ -0.39
RNF43-203ENST00000577716 ERVK-7P63135 1459 aa12.59□□□□□ -0.39
RNF43-203ENST00000577716 ZMYM3Q14202 1370 aa12.58□□□□□ -0.39
RNF43-203ENST00000577716 HSP90AA4PQ58FG1 418 aa12.58□□□□□ -0.39
RNF43-203ENST00000577716 CAVIN4Q5BKX8 364 aa12.58□□□□□ -0.39
RNF43-203ENST00000577716 ERCC6L2Q5T890 1561 aa12.58□□□□□ -0.39
RNF43-203ENST00000577716 CHST3Q7LGC8 479 aa12.58□□□□□ -0.39
RNF43-203ENST00000577716 ALG1Q9BT22 464 aa12.58□□□□□ -0.39
RNF43-203ENST00000577716 GOLGA6L10A6NI86 522 aa12.58□□□□□ -0.4
RNF43-203ENST00000577716 LMOD1P29536 600 aaPredicted RBP12.58□□□□□ -0.4
RNF43-203ENST00000577716 MARCKSP29966 332 aaPredicted RBP12.58□□□□□ -0.4
RNF43-203ENST00000577716 TTF1Q15361 905 aaPredicted RBP12.58□□□□□ -0.4
RNF43-203ENST00000577716 ODF2Q5BJF6 829 aa12.58□□□□□ -0.4
RNF43-203ENST00000577716 CENPHQ9H3R5 247 aa12.58□□□□□ -0.4
RNF43-203ENST00000577716 SNX14Q9Y5W7 946 aa12.58□□□□□ -0.4
RNF43-203ENST00000577716 ABCC4O15439 1325 aa12.58□□□□□ -0.4
RNF43-203ENST00000577716 BCORL1Q5H9F3 1711 aa12.58□□□□□ -0.4
RNF43-203ENST00000577716 IL15P40933 162 aaPredicted RBP12.58□□□□□ -0.4
RNF43-203ENST00000577716 ZSWIM4Q9H7M6 989 aa12.58□□□□□ -0.4
RNF43-203ENST00000577716 EDC4Q6P2E9 1401 aaKnown RBP12.58□□□□□ -0.4
RNF43-203ENST00000577716 NUP88Q99567 741 aaPredicted RBP12.58□□□□□ -0.4
RNF43-203ENST00000577716 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.58□□□□□ -0.4
RNF43-203ENST00000577716 V9GYY5 206 aaPredicted RBP12.58□□□□□ -0.4
RNF43-203ENST00000577716 ZBTB43O43298 467 aa12.57□□□□□ -0.4
RNF43-203ENST00000577716 APOBRQ0VD83 1088 aa12.57□□□□□ -0.4
RNF43-203ENST00000577716 BMS1Q14692 1282 aaKnown RBP12.57□□□□□ -0.4
RNF43-203ENST00000577716 DNAI1Q9UI46 699 aa12.57□□□□□ -0.4
RNF43-203ENST00000577716 HOXC9P31274 260 aa12.57□□□□□ -0.4
RNF43-203ENST00000577716 MFSD6Q6ZSS7 791 aa12.57□□□□□ -0.4
RNF43-203ENST00000577716 MKNK2Q9HBH9 465 aa12.57□□□□□ -0.4
RNF43-203ENST00000577716 PAG1Q9NWQ8 432 aa12.57□□□□□ -0.4
RNF43-203ENST00000577716 RAD50Q92878 1312 aa12.57□□□□□ -0.4
RNF43-203ENST00000577716 GOLGA6L9A6NEM1 432 aa12.57□□□□□ -0.4
RNF43-203ENST00000577716 SPTLC2O15270 562 aa12.57□□□□□ -0.4
RNF43-203ENST00000577716 NLRP5P59047 1200 aa12.57□□□□□ -0.4
RNF43-203ENST00000577716 DHX32Q7L7V1 743 aaKnown RBP12.57□□□□□ -0.4
RNF43-203ENST00000577716 GAS2L3Q86XJ1 694 aa12.57□□□□□ -0.4
RNF43-203ENST00000577716 PTPDC1A2A3K4 754 aa12.56□□□□□ -0.4
RNF43-203ENST00000577716 GADD45BO75293 160 aaPredicted RBP12.56□□□□□ -0.4
RNF43-203ENST00000577716 USP5P45974 858 aa12.56□□□□□ -0.4
RNF43-203ENST00000577716 SPA17Q15506 151 aa12.56□□□□□ -0.4
RNF43-203ENST00000577716 ATP2B3Q16720 1220 aa12.56□□□□□ -0.4
RNF43-203ENST00000577716 CATIPQ7Z7H3 387 aa12.56□□□□□ -0.4
RNF43-203ENST00000577716 NFATC2IPQ8NCF5 419 aa12.56□□□□□ -0.4
RNF43-203ENST00000577716 ZNF397Q8NF99 534 aaPredicted RBP12.56□□□□□ -0.4
RNF43-203ENST00000577716 BICC1Q9H694 974 aaKnown RBP12.56□□□□□ -0.4
RNF43-203ENST00000577716 NBPF7P0C2Y1 421 aaPredicted RBP12.56□□□□□ -0.4
RNF43-203ENST00000577716 TAF3Q5VWG9 929 aa12.56□□□□□ -0.4
RNF43-203ENST00000577716 KIAA0754O94854 1291 aa12.56□□□□□ -0.4
RNF43-203ENST00000577716 BRD1O95696 1058 aa12.56□□□□□ -0.4
RNF43-203ENST00000577716 PKP1Q13835 747 aa12.56□□□□□ -0.4
RNF43-203ENST00000577716 CCDC12Q8WUD4 166 aaPredicted RBP12.56□□□□□ -0.4
RNF43-203ENST00000577716 LRRIQ1Q96JM4 1722 aa12.56□□□□□ -0.4
RNF43-203ENST00000577716 TRPM2O94759 1503 aa12.56□□□□□ -0.4
RNF43-203ENST00000577716 CCDC194A0A1B0GVG4 234 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms