RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 SMG9Q9H0W8 520 aaKnown RBP6.71□□□□□ -1.34
TOP2A-202ENST00000577541 TSPAN10Q9H1Z9 355 aaPredicted RBP6.71□□□□□ -1.34
TOP2A-202ENST00000577541 SRA1Q9HD15 236 aaKnown RBP6.71□□□□□ -1.34
TOP2A-202ENST00000577541 NOD1Q9Y239 953 aa6.71□□□□□ -1.34
TOP2A-202ENST00000577541 HIF1AQ16665 826 aa6.7□□□□□ -1.34
TOP2A-202ENST00000577541 EML3Q32P44 896 aa6.7□□□□□ -1.34
TOP2A-202ENST00000577541 HMX2A2RU54 273 aa6.69□□□□□ -1.34
TOP2A-202ENST00000577541 DHX32Q7L7V1 743 aaKnown RBP6.69□□□□□ -1.34
TOP2A-202ENST00000577541 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.69□□□□□ -1.34
TOP2A-202ENST00000577541 MAP4K3Q8IVH8 894 aa6.69□□□□□ -1.34
TOP2A-202ENST00000577541 SETDB1Q15047 1291 aa6.68□□□□□ -1.34
TOP2A-202ENST00000577541 CBLL1Q75N03 491 aa6.68□□□□□ -1.34
TOP2A-202ENST00000577541 CEP41Q9BYV8 373 aa6.68□□□□□ -1.34
TOP2A-202ENST00000577541 PRM3Q9NNZ6 103 aa6.68□□□□□ -1.34
TOP2A-202ENST00000577541 JUNBP17275 347 aaPredicted RBP6.67□□□□□ -1.34
TOP2A-202ENST00000577541 GPLD1P80108 840 aa6.67□□□□□ -1.34
TOP2A-202ENST00000577541 UVSSAQ2YD98 709 aa6.67□□□□□ -1.34
TOP2A-202ENST00000577541 LCE5AQ5TCM9 118 aa6.67□□□□□ -1.34
TOP2A-202ENST00000577541 SPOCD1Q6ZMY3 1216 aa6.67□□□□□ -1.34
TOP2A-202ENST00000577541 HFE2Q6ZVN8 426 aa6.67□□□□□ -1.34
TOP2A-202ENST00000577541 IL22RA1Q8N6P7 574 aa6.67□□□□□ -1.34
TOP2A-202ENST00000577541 SHKBP1Q8TBC3 707 aa6.67□□□□□ -1.34
TOP2A-202ENST00000577541 UTP4Q969X6 686 aaKnown RBP6.67□□□□□ -1.34
TOP2A-202ENST00000577541 DMGDHQ9UI17 866 aaKnown RBP6.67□□□□□ -1.34
TOP2A-202ENST00000577541 ANGEL1Q9UNK9 670 aaKnown RBP6.67□□□□□ -1.34
TOP2A-202ENST00000577541 BCS1LQ9Y276 419 aa6.67□□□□□ -1.34
TOP2A-202ENST00000577541 HOXA10P31260 410 aaPredicted RBP6.66□□□□□ -1.34
TOP2A-202ENST00000577541 SEMA3FQ13275 785 aa6.66□□□□□ -1.34
TOP2A-202ENST00000577541 ALDH16A1Q8IZ83 802 aa6.66□□□□□ -1.34
TOP2A-202ENST00000577541 IL27Q8NEV9 243 aa6.66□□□□□ -1.34
TOP2A-202ENST00000577541 DBX1A6NMT0 343 aa6.65□□□□□ -1.34
TOP2A-202ENST00000577541 ZBTB7BO15156 539 aaPredicted RBP6.65□□□□□ -1.34
TOP2A-202ENST00000577541 C21orf2O43822 256 aa6.65□□□□□ -1.34
TOP2A-202ENST00000577541 LZTS3O60299 673 aaPredicted RBP6.65□□□□□ -1.34
TOP2A-202ENST00000577541 WISP1O95388 367 aa6.65□□□□□ -1.34
TOP2A-202ENST00000577541 ITGB5P18084 799 aa6.65□□□□□ -1.34
TOP2A-202ENST00000577541 TARSP26639 723 aaKnown RBP6.65□□□□□ -1.34
TOP2A-202ENST00000577541 COL19A1Q14993 1142 aa6.65□□□□□ -1.34
TOP2A-202ENST00000577541 KRT25Q7Z3Z0 450 aa6.65□□□□□ -1.34
TOP2A-202ENST00000577541 IFT43Q96FT9 208 aa6.65□□□□□ -1.34
TOP2A-202ENST00000577541 KIAA1024Q9UPX6 916 aa6.65□□□□□ -1.34
TOP2A-202ENST00000577541 EIF2AK2P19525 551 aaKnown RBP6.64□□□□□ -1.35
TOP2A-202ENST00000577541 ARID4AP29374 1257 aaPredicted RBP6.64□□□□□ -1.35
TOP2A-202ENST00000577541 IER5Q5VY09 327 aa6.64□□□□□ -1.35
TOP2A-202ENST00000577541 GDF6Q6KF10 455 aaPredicted RBP6.64□□□□□ -1.35
TOP2A-202ENST00000577541 NFXL1Q6ZNB6 911 aa6.64□□□□□ -1.35
TOP2A-202ENST00000577541 CLEC10AQ8IUN9 316 aa6.64□□□□□ -1.35
TOP2A-202ENST00000577541 EPB42P16452 691 aa6.63□□□□□ -1.35
TOP2A-202ENST00000577541 NCOA4Q13772 614 aa6.63□□□□□ -1.35
TOP2A-202ENST00000577541 PLD4Q96BZ4 506 aa6.63□□□□□ -1.35
TOP2A-202ENST00000577541 FAM46AQ96IP4 442 aaKnown RBP6.63□□□□□ -1.35
TOP2A-202ENST00000577541 MYRFLQ96LU7 910 aa6.63□□□□□ -1.35
TOP2A-202ENST00000577541 FAM83CQ9BQN1 747 aa6.63□□□□□ -1.35
TOP2A-202ENST00000577541 ZNF124Q15973 351 aa6.62□□□□□ -1.35
TOP2A-202ENST00000577541 ZNF648Q5T619 568 aaPredicted RBP6.62□□□□□ -1.35
TOP2A-202ENST00000577541 GALNT11Q8NCW6 608 aa6.62□□□□□ -1.35
TOP2A-202ENST00000577541 COL26A1Q96A83 441 aa6.62□□□□□ -1.35
TOP2A-202ENST00000577541 PIM2Q9P1W9 311 aa6.62□□□□□ -1.35
TOP2A-202ENST00000577541 WDR64B1ANS9 1081 aa6.61□□□□□ -1.35
TOP2A-202ENST00000577541 TM4SF5O14894 197 aa6.61□□□□□ -1.35
TOP2A-202ENST00000577541 PPP1R12BO60237 982 aaPredicted RBP6.61□□□□□ -1.35
TOP2A-202ENST00000577541 RARAP10276 462 aa6.61□□□□□ -1.35
TOP2A-202ENST00000577541 SKIP12755 728 aa6.61□□□□□ -1.35
TOP2A-202ENST00000577541 NRLP54845 237 aa6.61□□□□□ -1.35
TOP2A-202ENST00000577541 FAM20CQ8IXL6 584 aa6.61□□□□□ -1.35
TOP2A-202ENST00000577541 DEPDC4Q8N2C3 294 aa6.61□□□□□ -1.35
TOP2A-202ENST00000577541 FBXL18Q96ME1 805 aa6.61□□□□□ -1.35
TOP2A-202ENST00000577541 KCNK4Q9NYG8 393 aa6.61□□□□□ -1.35
TOP2A-202ENST00000577541 CCDC39Q9UFE4 941 aa6.61□□□□□ -1.35
TOP2A-202ENST00000577541 TGFBR3LH3BV60 316 aa6.6□□□□□ -1.35
TOP2A-202ENST00000577541 J3QW42 95 aa6.6□□□□□ -1.35
TOP2A-202ENST00000577541 SASH3O75995 380 aa6.6□□□□□ -1.35
TOP2A-202ENST00000577541 SOX11P35716 441 aa6.6□□□□□ -1.35
TOP2A-202ENST00000577541 KRTAP5-3Q6L8H2 238 aa6.6□□□□□ -1.35
TOP2A-202ENST00000577541 ACAD11Q709F0 780 aa6.6□□□□□ -1.35
TOP2A-202ENST00000577541 TP53INP2Q8IXH6 220 aa6.6□□□□□ -1.35
TOP2A-202ENST00000577541 TPCN2Q8NHX9 752 aa6.6□□□□□ -1.35
TOP2A-202ENST00000577541 MUC3BQ9H195 1237 aa6.6□□□□□ -1.35
TOP2A-202ENST00000577541 C11orf16Q9NQ32 467 aa6.6□□□□□ -1.35
TOP2A-202ENST00000577541 WASHC4Q2M389 1173 aa6.59□□□□□ -1.35
TOP2A-202ENST00000577541 NGLY1Q96IV0 654 aa6.59□□□□□ -1.35
TOP2A-202ENST00000577541 C2orf49Q9BVC5 232 aaPredicted RBP6.59□□□□□ -1.35
TOP2A-202ENST00000577541 KCNF1Q9H3M0 494 aa6.59□□□□□ -1.35
TOP2A-202ENST00000577541 GDPD2Q9HCC8 539 aa6.59□□□□□ -1.35
TOP2A-202ENST00000577541 LOC102724428A0A0B4J2F2 783 aa6.58□□□□□ -1.36
TOP2A-202ENST00000577541 PRNPP04156 253 aa6.58□□□□□ -1.36
TOP2A-202ENST00000577541 INPP5BP32019 993 aa6.58□□□□□ -1.36
TOP2A-202ENST00000577541 CD68P34810 354 aaPredicted RBP6.58□□□□□ -1.36
TOP2A-202ENST00000577541 SIK1P57059 783 aa6.58□□□□□ -1.36
TOP2A-202ENST00000577541 BEND4Q6ZU67 534 aa6.58□□□□□ -1.36
TOP2A-202ENST00000577541 STAG2Q8N3U4 1231 aa6.58□□□□□ -1.36
TOP2A-202ENST00000577541 PPME1Q9Y570 386 aa6.58□□□□□ -1.36
TOP2A-202ENST00000577541 BMP3P12645 472 aa6.57□□□□□ -1.36
TOP2A-202ENST00000577541 CLDN10P78369 228 aa6.57□□□□□ -1.36
TOP2A-202ENST00000577541 MSMPQ1L6U9 139 aa6.57□□□□□ -1.36
TOP2A-202ENST00000577541 CCDC102BQ68D86 513 aa6.57□□□□□ -1.36
TOP2A-202ENST00000577541 TRIM50Q86XT4 487 aa6.57□□□□□ -1.36
TOP2A-202ENST00000577541 CACTIN-AS1Q8N1I8 211 aa6.57□□□□□ -1.36
TOP2A-202ENST00000577541 TSEN2Q8NCE0 465 aaKnown RBP6.57□□□□□ -1.36
TOP2A-202ENST00000577541 TLR7Q9NYK1 1049 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms