RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 TRIM28Q13263 835 aaKnown RBP5.7□□□□□ -1.5
CDH8-204ENST00000577536 OCLNQ16625 522 aa5.7□□□□□ -1.5
CDH8-204ENST00000577536 STK32AQ8WU08 396 aa5.7□□□□□ -1.5
CDH8-204ENST00000577536 JPH1Q9HDC5 661 aaPredicted RBP5.7□□□□□ -1.5
CDH8-204ENST00000577536 NAGPAQ9UK23 515 aa5.7□□□□□ -1.5
CDH8-204ENST00000577536 OPLAHO14841 1288 aa5.69□□□□□ -1.5
CDH8-204ENST00000577536 ATG7O95352 703 aa5.69□□□□□ -1.5
CDH8-204ENST00000577536 GATA4P43694 442 aa5.69□□□□□ -1.5
CDH8-204ENST00000577536 PCSK7Q16549 785 aa5.69□□□□□ -1.5
CDH8-204ENST00000577536 COX20Q5RI15 118 aa5.69□□□□□ -1.5
CDH8-204ENST00000577536 TRAPPC3LQ5T215 181 aa5.69□□□□□ -1.5
CDH8-204ENST00000577536 PSAPL1Q6NUJ1 521 aa5.69□□□□□ -1.5
CDH8-204ENST00000577536 KRT25Q7Z3Z0 450 aa5.69□□□□□ -1.5
CDH8-204ENST00000577536 NUDT8Q8WV74 236 aa5.69□□□□□ -1.5
CDH8-204ENST00000577536 ZFATQ9P243 1243 aa5.69□□□□□ -1.5
CDH8-204ENST00000577536 SASH3O75995 380 aa5.68□□□□□ -1.5
CDH8-204ENST00000577536 TARSP26639 723 aaKnown RBP5.68□□□□□ -1.5
CDH8-204ENST00000577536 AFF1P51825 1210 aaKnown RBP5.68□□□□□ -1.5
CDH8-204ENST00000577536 DOC2BQ14184 412 aa5.68□□□□□ -1.5
CDH8-204ENST00000577536 DHX32Q7L7V1 743 aaKnown RBP5.68□□□□□ -1.5
CDH8-204ENST00000577536 FAM35AQ86V20 835 aa5.68□□□□□ -1.5
CDH8-204ENST00000577536 TREML1Q86YW5 311 aa5.68□□□□□ -1.5
CDH8-204ENST00000577536 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
CDH8-204ENST00000577536 COL26A1Q96A83 441 aa5.68□□□□□ -1.5
CDH8-204ENST00000577536 NACC1Q96RE7 527 aa5.68□□□□□ -1.5
CDH8-204ENST00000577536 USP20Q9Y2K6 914 aa5.68□□□□□ -1.5
CDH8-204ENST00000577536 RTCBQ9Y3I0 505 aaKnown RBP5.68□□□□□ -1.5
CDH8-204ENST00000577536 A0A0A0MRY4 1105 aa5.67□□□□□ -1.5
CDH8-204ENST00000577536 ZBTB42B2RXF5 422 aa5.67□□□□□ -1.5
CDH8-204ENST00000577536 RGS9O75916 674 aaPredicted RBP5.67□□□□□ -1.5
CDH8-204ENST00000577536 EGFRP00533 1210 aa5.67□□□□□ -1.5
CDH8-204ENST00000577536 RARAP10276 462 aa5.67□□□□□ -1.5
CDH8-204ENST00000577536 CPB1P15086 417 aa5.67□□□□□ -1.5
CDH8-204ENST00000577536 GRIK4Q16099 956 aa5.67□□□□□ -1.5
CDH8-204ENST00000577536 TMEM164Q5U3C3 297 aa5.67□□□□□ -1.5
CDH8-204ENST00000577536 TRPM4Q8TD43 1214 aa5.67□□□□□ -1.5
CDH8-204ENST00000577536 CXXC1Q9P0U4 656 aaPredicted RBP5.67□□□□□ -1.5
CDH8-204ENST00000577536 XYLBO75191 536 aa5.66□□□□□ -1.5
CDH8-204ENST00000577536 ELNP15502 786 aa5.66□□□□□ -1.5
CDH8-204ENST00000577536 ARID4AP29374 1257 aaPredicted RBP5.66□□□□□ -1.5
CDH8-204ENST00000577536 RAC1P63000 192 aa5.66□□□□□ -1.5
CDH8-204ENST00000577536 GPLD1P80108 840 aa5.66□□□□□ -1.5
CDH8-204ENST00000577536 PERM1Q5SV97 790 aa5.66□□□□□ -1.5
CDH8-204ENST00000577536 C16orf46Q6P387 395 aa5.66□□□□□ -1.5
CDH8-204ENST00000577536 ETFBKMTQ8IXQ9 262 aa5.66□□□□□ -1.5
CDH8-204ENST00000577536 RGL4Q8IZJ4 473 aa5.66□□□□□ -1.5
CDH8-204ENST00000577536 CMTR1Q8N1G2 835 aaKnown RBP5.66□□□□□ -1.5
CDH8-204ENST00000577536 PBXIP1Q96AQ6 731 aa5.66□□□□□ -1.5
CDH8-204ENST00000577536 CCDC97Q96F63 343 aaPredicted RBP5.66□□□□□ -1.5
CDH8-204ENST00000577536 LPIN3Q9BQK8 851 aa5.66□□□□□ -1.5
CDH8-204ENST00000577536 SAP130Q9H0E3 1048 aa5.66□□□□□ -1.5
CDH8-204ENST00000577536 FRRS1LQ9P0K9 344 aa5.66□□□□□ -1.5
CDH8-204ENST00000577536 BRD2P25440 801 aaKnown RBP5.65□□□□□ -1.5
CDH8-204ENST00000577536 MLLT1Q03111 559 aaPredicted RBP5.65□□□□□ -1.5
CDH8-204ENST00000577536 CAPN12Q6ZSI9 719 aa5.65□□□□□ -1.5
CDH8-204ENST00000577536 ILDR2Q71H61 639 aa5.65□□□□□ -1.5
CDH8-204ENST00000577536 DMRTC2Q8IXT2 367 aaPredicted RBP5.65□□□□□ -1.5
CDH8-204ENST00000577536 MKNK1Q9BUB5 465 aa5.65□□□□□ -1.5
CDH8-204ENST00000577536 TLR7Q9NYK1 1049 aaKnown RBP5.65□□□□□ -1.5
CDH8-204ENST00000577536 SERPINA10Q9UK55 444 aa5.65□□□□□ -1.5
CDH8-204ENST00000577536 KCNMB2Q9Y691 235 aa5.65□□□□□ -1.5
CDH8-204ENST00000577536 C9orf172C9J069 976 aa5.64□□□□□ -1.51
CDH8-204ENST00000577536 TNFRSF10BO14763 440 aa5.64□□□□□ -1.51
CDH8-204ENST00000577536 PTCD1O75127 700 aaKnown RBP5.64□□□□□ -1.51
CDH8-204ENST00000577536 NRLP54845 237 aa5.64□□□□□ -1.51
CDH8-204ENST00000577536 GRIK5Q16478 980 aa5.64□□□□□ -1.51
CDH8-204ENST00000577536 MSL1Q68DK7 614 aa5.64□□□□□ -1.51
CDH8-204ENST00000577536 ELMSAN1Q6PJG2 1045 aa5.64□□□□□ -1.51
CDH8-204ENST00000577536 FMR1NBQ8N0W7 255 aaPredicted RBP5.64□□□□□ -1.51
CDH8-204ENST00000577536 TTC9Q92623 222 aa5.64□□□□□ -1.51
CDH8-204ENST00000577536 CLP1Q92989 425 aaKnown RBP5.64□□□□□ -1.51
CDH8-204ENST00000577536 TPSG1Q9NRR2 321 aa5.64□□□□□ -1.51
CDH8-204ENST00000577536 SELPP16109 830 aa5.63□□□□□ -1.51
CDH8-204ENST00000577536 PLAURQ03405 335 aa5.63□□□□□ -1.51
CDH8-204ENST00000577536 NAA30Q147X3 362 aaPredicted RBP5.63□□□□□ -1.51
CDH8-204ENST00000577536 RSPO4Q2I0M5 234 aaPredicted RBP5.63□□□□□ -1.51
CDH8-204ENST00000577536 FOXD4L6Q3SYB3 417 aaPredicted RBP5.63□□□□□ -1.51
CDH8-204ENST00000577536 FAM26DQ5JW98 314 aa5.63□□□□□ -1.51
CDH8-204ENST00000577536 FOXD4L3Q6VB84 417 aaPredicted RBP5.63□□□□□ -1.51
CDH8-204ENST00000577536 HFE2Q6ZVN8 426 aa5.63□□□□□ -1.51
CDH8-204ENST00000577536 LENG1Q96BZ8 264 aaPredicted RBP5.63□□□□□ -1.51
CDH8-204ENST00000577536 ARID3CA6NKF2 412 aa5.62□□□□□ -1.51
CDH8-204ENST00000577536 MMP20O60882 483 aa5.62□□□□□ -1.51
CDH8-204ENST00000577536 PSAPP07602 524 aa5.62□□□□□ -1.51
CDH8-204ENST00000577536 EIF2AK2P19525 551 aaKnown RBP5.62□□□□□ -1.51
CDH8-204ENST00000577536 ADGRE1Q14246 886 aa5.62□□□□□ -1.51
CDH8-204ENST00000577536 MBTPS1Q14703 1052 aa5.62□□□□□ -1.51
CDH8-204ENST00000577536 TRIP4Q15650 581 aaPredicted RBP5.62□□□□□ -1.51
CDH8-204ENST00000577536 SHISA2Q6UWI4 295 aa5.62□□□□□ -1.51
CDH8-204ENST00000577536 WFDC8Q8IUA0 241 aa5.62□□□□□ -1.51
CDH8-204ENST00000577536 DTWD1Q8N5C7 304 aa5.62□□□□□ -1.51
CDH8-204ENST00000577536 SMG9Q9H0W8 520 aaKnown RBP5.62□□□□□ -1.51
CDH8-204ENST00000577536 FAM13BQ9NYF5 915 aa5.62□□□□□ -1.51
CDH8-204ENST00000577536 SLAIN2Q9P270 581 aa5.62□□□□□ -1.51
CDH8-204ENST00000577536 GTF3C3Q9Y5Q9 886 aa5.62□□□□□ -1.51
CDH8-204ENST00000577536 LOC102724428A0A0B4J2F2 783 aa5.61□□□□□ -1.51
CDH8-204ENST00000577536 HOXD8P13378 290 aaPredicted RBP5.61□□□□□ -1.51
CDH8-204ENST00000577536 SOX18P35713 384 aa5.61□□□□□ -1.51
CDH8-204ENST00000577536 SIK1P57059 783 aa5.61□□□□□ -1.51
CDH8-204ENST00000577536 NRG1Q02297 640 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms