RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 DCDC2BA2VCK2 349 aa7.55□□□□□ -1.2
CTNS-210ENST00000576979 PCBP4P57723 403 aaKnown RBP7.55□□□□□ -1.2
CTNS-210ENST00000576979 RNF20Q5VTR2 975 aa7.55□□□□□ -1.2
CTNS-210ENST00000576979 PNISRQ8TF01 805 aaKnown RBP7.55□□□□□ -1.2
CTNS-210ENST00000576979 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.55□□□□□ -1.2
CTNS-210ENST00000576979 ABCC2Q92887 1545 aa7.55□□□□□ -1.2
CTNS-210ENST00000576979 LRPPRCP42704 1394 aaKnown RBP7.55□□□□□ -1.2
CTNS-210ENST00000576979 SPHKAPQ2M3C7 1700 aa7.55□□□□□ -1.2
CTNS-210ENST00000576979 COL17A1Q9UMD9 1497 aaPredicted RBP7.55□□□□□ -1.2
CTNS-210ENST00000576979 RNF123Q5XPI4 1314 aa7.54□□□□□ -1.2
CTNS-210ENST00000576979 PDIA4P13667 645 aaKnown RBP7.54□□□□□ -1.2
CTNS-210ENST00000576979 SH3D19Q5HYK7 790 aa7.54□□□□□ -1.2
CTNS-210ENST00000576979 XAGE2Q96GT9 111 aa7.54□□□□□ -1.2
CTNS-210ENST00000576979 ESF1Q9H501 851 aaKnown RBP7.54□□□□□ -1.2
CTNS-210ENST00000576979 PCDHGC4Q9Y5F7 938 aa7.54□□□□□ -1.2
CTNS-210ENST00000576979 IQGAP1P46940 1657 aa7.54□□□□□ -1.2
CTNS-210ENST00000576979 ZCCHC11Q5TAX3 1644 aaKnown RBP7.53□□□□□ -1.2
CTNS-210ENST00000576979 HYAL3O43820 417 aaPredicted RBP7.53□□□□□ -1.2
CTNS-210ENST00000576979 PDE3BQ13370 1112 aa7.53□□□□□ -1.2
CTNS-210ENST00000576979 LRP8Q14114 963 aa7.53□□□□□ -1.2
CTNS-210ENST00000576979 CCDC125Q86Z20 511 aa7.53□□□□□ -1.2
CTNS-210ENST00000576979 CDCA7Q9BWT1 371 aaPredicted RBP7.53□□□□□ -1.2
CTNS-210ENST00000576979 A2MP01023 1474 aa7.53□□□□□ -1.2
CTNS-210ENST00000576979 ERBINQ96RT1 1412 aa7.52□□□□□ -1.2
CTNS-210ENST00000576979 ZMYM4Q5VZL5 1548 aa7.52□□□□□ -1.2
CTNS-210ENST00000576979 MAGI2Q86UL8 1455 aa7.52□□□□□ -1.21
CTNS-210ENST00000576979 GPRASP1Q5JY77 1395 aa7.52□□□□□ -1.21
CTNS-210ENST00000576979 MAPTP10636 758 aaKnown RBP7.52□□□□□ -1.21
CTNS-210ENST00000576979 ATP4AP20648 1035 aa7.52□□□□□ -1.21
CTNS-210ENST00000576979 NLRP13Q86W25 1043 aa7.52□□□□□ -1.21
CTNS-210ENST00000576979 WASHC2CQ9Y4E1 1318 aa7.52□□□□□ -1.21
CTNS-210ENST00000576979 INSRP06213 1382 aa7.51□□□□□ -1.21
CTNS-210ENST00000576979 PARD3Q8TEW0 1356 aa7.51□□□□□ -1.21
CTNS-210ENST00000576979 KIF1BO60333 1816 aa7.51□□□□□ -1.21
CTNS-210ENST00000576979 APBB1O00213 710 aa7.51□□□□□ -1.21
CTNS-210ENST00000576979 ATXN7O15265 892 aaPredicted RBP7.51□□□□□ -1.21
CTNS-210ENST00000576979 APBA3O96018 575 aa7.51□□□□□ -1.21
CTNS-210ENST00000576979 GTF2E1P29083 439 aaPredicted RBP7.51□□□□□ -1.21
CTNS-210ENST00000576979 ANP32AP39687 249 aaKnown RBP7.51□□□□□ -1.21
CTNS-210ENST00000576979 PLA2G4AP47712 749 aa7.51□□□□□ -1.21
CTNS-210ENST00000576979 KIAA1210Q9ULL0 1709 aa7.51□□□□□ -1.21
CTNS-210ENST00000576979 ABCC1P33527 1531 aa7.51□□□□□ -1.21
CTNS-210ENST00000576979 ATP10AO60312 1499 aa7.5□□□□□ -1.21
CTNS-210ENST00000576979 MADDQ8WXG6 1647 aa7.5□□□□□ -1.21
CTNS-210ENST00000576979 TNP2Q05952 138 aa7.5□□□□□ -1.21
CTNS-210ENST00000576979 FLIIQ13045 1269 aa7.5□□□□□ -1.21
CTNS-210ENST00000576979 FIGNL1Q6PIW4 674 aa7.5□□□□□ -1.21
CTNS-210ENST00000576979 RHBDD1Q8TEB9 315 aa7.5□□□□□ -1.21
CTNS-210ENST00000576979 TET3O43151 1660 aa7.5□□□□□ -1.21
CTNS-210ENST00000576979 KDM5AP29375 1690 aaKnown RBP7.5□□□□□ -1.21
CTNS-210ENST00000576979 RFC5P40937 340 aa7.49□□□□□ -1.21
CTNS-210ENST00000576979 RRP1P56182 461 aaKnown RBP7.49□□□□□ -1.21
CTNS-210ENST00000576979 TMF1P82094 1093 aa7.49□□□□□ -1.21
CTNS-210ENST00000576979 GRIK4Q16099 956 aa7.49□□□□□ -1.21
CTNS-210ENST00000576979 RGL3Q3MIN7 710 aa7.49□□□□□ -1.21
CTNS-210ENST00000576979 PRRT3Q5FWE3 981 aa7.49□□□□□ -1.21
CTNS-210ENST00000576979 TBC1D9Q6ZT07 1266 aa7.49□□□□□ -1.21
CTNS-210ENST00000576979 NOP58Q9Y2X3 529 aaKnown RBP7.49□□□□□ -1.21
CTNS-210ENST00000576979 SYNMO15061 1565 aa7.49□□□□□ -1.21
CTNS-210ENST00000576979 DEPDC5O75140 1603 aa7.49□□□□□ -1.21
CTNS-210ENST00000576979 KHNYNO15037 678 aaKnown RBP7.48□□□□□ -1.21
CTNS-210ENST00000576979 BLMP54132 1417 aaPredicted RBP7.48□□□□□ -1.21
CTNS-210ENST00000576979 COL9A3Q14050 684 aaPredicted RBP7.48□□□□□ -1.21
CTNS-210ENST00000576979 FAM182BQ5T319 152 aa7.48□□□□□ -1.21
CTNS-210ENST00000576979 ZNF468Q5VIY5 522 aaPredicted RBP7.48□□□□□ -1.21
CTNS-210ENST00000576979 CCDC85AQ96PX6 553 aaPredicted RBP7.48□□□□□ -1.21
CTNS-210ENST00000576979 KRTAP4-7Q9BYR0 210 aa7.48□□□□□ -1.21
CTNS-210ENST00000576979 STRN4Q9NRL3 753 aa7.48□□□□□ -1.21
CTNS-210ENST00000576979 RCAN3Q9UKA8 241 aa7.48□□□□□ -1.21
CTNS-210ENST00000576979 PLA2R1Q13018 1463 aa7.48□□□□□ -1.21
CTNS-210ENST00000576979 TRPM2O94759 1503 aa7.47□□□□□ -1.21
CTNS-210ENST00000576979 ARAP3Q8WWN8 1544 aa7.47□□□□□ -1.21
CTNS-210ENST00000576979 PLCH2O75038 1416 aa7.47□□□□□ -1.21
CTNS-210ENST00000576979 TLR1Q15399 786 aa7.47□□□□□ -1.21
CTNS-210ENST00000576979 EFCAB2Q5VUJ9 269 aa7.47□□□□□ -1.21
CTNS-210ENST00000576979 C8orf86Q6ZUL3 223 aa7.47□□□□□ -1.21
CTNS-210ENST00000576979 GJD4Q96KN9 370 aaPredicted RBP7.47□□□□□ -1.21
CTNS-210ENST00000576979 ETNK1Q9HBU6 452 aa7.47□□□□□ -1.21
CTNS-210ENST00000576979 AVENQ9NQS1 362 aaPredicted RBP7.47□□□□□ -1.21
CTNS-210ENST00000576979 CLTCL1P53675 1640 aa7.47□□□□□ -1.21
CTNS-210ENST00000576979 UHRF1BP1LA0JNW5 1464 aa7.47□□□□□ -1.21
CTNS-210ENST00000576979 DISP3Q9P2K9 1392 aa7.46□□□□□ -1.21
CTNS-210ENST00000576979 ERCC6L2Q5T890 1561 aa7.46□□□□□ -1.21
CTNS-210ENST00000576979 TCERG1O14776 1098 aaKnown RBP7.46□□□□□ -1.22
CTNS-210ENST00000576979 NBPF1Q3BBV0 1214 aa7.46□□□□□ -1.22
CTNS-210ENST00000576979 CDCA8Q53HL2 280 aa7.46□□□□□ -1.22
CTNS-210ENST00000576979 NLRP8Q86W28 1048 aa7.46□□□□□ -1.22
CTNS-210ENST00000576979 FAM117AQ9C073 453 aa7.46□□□□□ -1.22
CTNS-210ENST00000576979 PRR12Q9ULL5 1215 aa7.46□□□□□ -1.22
CTNS-210ENST00000576979 MYOM1P52179 1685 aa7.46□□□□□ -1.22
CTNS-210ENST00000576979 A0A1W2PNR3 127 aa7.45□□□□□ -1.22
CTNS-210ENST00000576979 CC2D1BQ5T0F9 858 aaKnown RBP7.45□□□□□ -1.22
CTNS-210ENST00000576979 AIDAQ96BJ3 306 aa7.45□□□□□ -1.22
CTNS-210ENST00000576979 MDFIQ99750 246 aa7.45□□□□□ -1.22
CTNS-210ENST00000576979 ZFYVE16Q7Z3T8 1539 aa7.45□□□□□ -1.22
CTNS-210ENST00000576979 CLASP1Q7Z460 1538 aa7.45□□□□□ -1.22
CTNS-210ENST00000576979 EIF3AQ14152 1382 aaKnown RBP7.45□□□□□ -1.22
CTNS-210ENST00000576979 KANK1Q14678 1352 aa7.45□□□□□ -1.22
CTNS-210ENST00000576979 RTEL1-TNFRSF6BF6WH68 1400 aa7.44□□□□□ -1.22
CTNS-210ENST00000576979 IFT172Q9UG01 1749 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms