RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 HHIPL1Q96JK4 782 aa13.4□□□□□ -0.26
NPLOC4-220ENST00000576940 UTP14AQ9BVJ6 771 aaKnown RBP13.4□□□□□ -0.26
NPLOC4-220ENST00000576940 CNOT7Q9UIV1 285 aaKnown RBP13.4□□□□□ -0.26
NPLOC4-220ENST00000576940 IBTKQ9P2D0 1353 aaPredicted RBP13.4□□□□□ -0.26
NPLOC4-220ENST00000576940 YDJCA8MPS7 323 aa13.39□□□□□ -0.27
NPLOC4-220ENST00000576940 BBOX1O75936 387 aa13.39□□□□□ -0.27
NPLOC4-220ENST00000576940 ANXA1P04083 346 aa13.39□□□□□ -0.27
NPLOC4-220ENST00000576940 HCLS1P14317 486 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-220ENST00000576940 EIF2S2P20042 333 aaKnown RBP13.39□□□□□ -0.27
NPLOC4-220ENST00000576940 PDIA6Q15084 440 aa13.39□□□□□ -0.27
NPLOC4-220ENST00000576940 PARP10Q53GL7 1025 aa13.39□□□□□ -0.27
NPLOC4-220ENST00000576940 ZC3H15Q8WU90 426 aaKnown RBP13.39□□□□□ -0.27
NPLOC4-220ENST00000576940 ZNF428Q96B54 188 aa13.39□□□□□ -0.27
NPLOC4-220ENST00000576940 KIAA2012Q0VF49 1180 aa13.38□□□□□ -0.27
NPLOC4-220ENST00000576940 TNIP1Q15025 636 aa13.38□□□□□ -0.27
NPLOC4-220ENST00000576940 PROSER3Q2NL68 480 aa13.38□□□□□ -0.27
NPLOC4-220ENST00000576940 LRP10Q7Z4F1 713 aa13.38□□□□□ -0.27
NPLOC4-220ENST00000576940 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
NPLOC4-220ENST00000576940 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
NPLOC4-220ENST00000576940 H7C1D1 291 aa13.37□□□□□ -0.27
NPLOC4-220ENST00000576940 NEFMP07197 916 aa13.37□□□□□ -0.27
NPLOC4-220ENST00000576940 HUNKP57058 714 aa13.37□□□□□ -0.27
NPLOC4-220ENST00000576940 SAMD7Q7Z3H4 446 aa13.37□□□□□ -0.27
NPLOC4-220ENST00000576940 PLEKHF1Q96S99 279 aa13.37□□□□□ -0.27
NPLOC4-220ENST00000576940 AIMP1Q12904 312 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-220ENST00000576940 NOGQ13253 232 aa13.36□□□□□ -0.27
NPLOC4-220ENST00000576940 NFE2L2Q16236 605 aa13.36□□□□□ -0.27
NPLOC4-220ENST00000576940 DDX46Q7L014 1031 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-220ENST00000576940 MICALL2Q8IY33 904 aa13.36□□□□□ -0.27
NPLOC4-220ENST00000576940 KDM3BQ7LBC6 1761 aa13.35□□□□□ -0.27
NPLOC4-220ENST00000576940 DLG5Q8TDM6 1919 aa13.35□□□□□ -0.27
NPLOC4-220ENST00000576940 RIMBP2O15034 1052 aa13.35□□□□□ -0.27
NPLOC4-220ENST00000576940 EGFRP00533 1210 aa13.35□□□□□ -0.27
NPLOC4-220ENST00000576940 TBC1D10BQ4KMP7 808 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-220ENST00000576940 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
NPLOC4-220ENST00000576940 COPS6Q7L5N1 327 aa13.35□□□□□ -0.27
NPLOC4-220ENST00000576940 NLRP10Q86W26 655 aa13.35□□□□□ -0.27
NPLOC4-220ENST00000576940 NECTIN2Q92692 538 aa13.35□□□□□ -0.27
NPLOC4-220ENST00000576940 KCNQ5Q9NR82 932 aa13.35□□□□□ -0.27
NPLOC4-220ENST00000576940 PCDH10Q9P2E7 1040 aa13.35□□□□□ -0.27
NPLOC4-220ENST00000576940 ERBB4Q15303 1308 aa13.35□□□□□ -0.27
NPLOC4-220ENST00000576940 TNRC18O15417 2968 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-220ENST00000576940 FAM155AB1AL88 458 aaPredicted RBP13.34□□□□□ -0.27
NPLOC4-220ENST00000576940 PSMD14O00487 310 aa13.34□□□□□ -0.27
NPLOC4-220ENST00000576940 KIF23Q02241 960 aaPredicted RBP13.34□□□□□ -0.27
NPLOC4-220ENST00000576940 GRAPQ13588 217 aa13.34□□□□□ -0.27
NPLOC4-220ENST00000576940 RGMBQ6NW40 437 aa13.34□□□□□ -0.27
NPLOC4-220ENST00000576940 GRAPLQ8TC17 118 aaPredicted RBP13.34□□□□□ -0.27
NPLOC4-220ENST00000576940 DBNDD1Q9H9R9 158 aa13.34□□□□□ -0.27
NPLOC4-220ENST00000576940 TRMT112Q9UI30 125 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-220ENST00000576940 TSPYL4Q9UJ04 414 aa13.34□□□□□ -0.27
NPLOC4-220ENST00000576940 CDHR2Q9BYE9 1310 aa13.34□□□□□ -0.27
NPLOC4-220ENST00000576940 TAF1P21675 1872 aa13.33□□□□□ -0.27
NPLOC4-220ENST00000576940 ADM5C9JUS6 153 aa13.33□□□□□ -0.28
NPLOC4-220ENST00000576940 TRPA1O75762 1119 aa13.33□□□□□ -0.28
NPLOC4-220ENST00000576940 SOX10P56693 466 aa13.33□□□□□ -0.28
NPLOC4-220ENST00000576940 KRT26Q7Z3Y9 468 aa13.33□□□□□ -0.28
NPLOC4-220ENST00000576940 XAGE3Q8WTP9 111 aa13.33□□□□□ -0.28
NPLOC4-220ENST00000576940 GBA2Q9HCG7 927 aaPredicted RBP13.33□□□□□ -0.28
NPLOC4-220ENST00000576940 RNF186Q9NXI6 227 aa13.33□□□□□ -0.28
NPLOC4-220ENST00000576940 NSFL1CQ9UNZ2 370 aaKnown RBP13.33□□□□□ -0.28
NPLOC4-220ENST00000576940 POLR2AP24928 1970 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-220ENST00000576940 ZNF157P51786 506 aaPredicted RBP13.32□□□□□ -0.28
NPLOC4-220ENST00000576940 TCIRG1Q13488 830 aa13.32□□□□□ -0.28
NPLOC4-220ENST00000576940 DOK7Q18PE1 504 aa13.32□□□□□ -0.28
NPLOC4-220ENST00000576940 WASHC4Q2M389 1173 aa13.32□□□□□ -0.28
NPLOC4-220ENST00000576940 C2orf69Q8N8R5 385 aa13.32□□□□□ -0.28
NPLOC4-220ENST00000576940 DPF2Q92785 391 aa13.32□□□□□ -0.28
NPLOC4-220ENST00000576940 CELF1Q92879 486 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-220ENST00000576940 HSP90AB3PQ58FF7 597 aa13.31□□□□□ -0.28
NPLOC4-220ENST00000576940 CCDC102AQ96A19 550 aa13.31□□□□□ -0.28
NPLOC4-220ENST00000576940 DCPSQ96C86 337 aaKnown RBP13.31□□□□□ -0.28
NPLOC4-220ENST00000576940 CSRNP1Q96S65 589 aa13.31□□□□□ -0.28
NPLOC4-220ENST00000576940 POLLQ9UGP5 575 aa13.31□□□□□ -0.28
NPLOC4-220ENST00000576940 SH3TC1Q8TE82 1336 aa13.31□□□□□ -0.28
NPLOC4-220ENST00000576940 C6orf229H3BNL8 230 aa13.3□□□□□ -0.28
NPLOC4-220ENST00000576940 RIPK4P57078 832 aa13.3□□□□□ -0.28
NPLOC4-220ENST00000576940 GPSM2P81274 684 aa13.3□□□□□ -0.28
NPLOC4-220ENST00000576940 LAMB2P55268 1798 aa13.3□□□□□ -0.28
NPLOC4-220ENST00000576940 FAM89AQ96GI7 184 aa13.29□□□□□ -0.28
NPLOC4-220ENST00000576940 SAGE1Q9NXZ1 904 aa13.29□□□□□ -0.28
NPLOC4-220ENST00000576940 ASTN2O75129 1339 aaPredicted RBP13.29□□□□□ -0.28
NPLOC4-220ENST00000576940 MAPK8IP3Q9UPT6 1336 aa13.29□□□□□ -0.28
NPLOC4-220ENST00000576940 DUOX1Q9NRD9 1551 aa13.28□□□□□ -0.28
NPLOC4-220ENST00000576940 PDE4DIPQ5VU43 2346 aa13.28□□□□□ -0.28
NPLOC4-220ENST00000576940 ANKRD36CQ5JPF3 1778 aa13.28□□□□□ -0.28
NPLOC4-220ENST00000576940 ECE2O60344 883 aa13.28□□□□□ -0.28
NPLOC4-220ENST00000576940 KRT24Q2M2I5 525 aa13.28□□□□□ -0.28
NPLOC4-220ENST00000576940 RTL5Q5HYW3 569 aaPredicted RBP13.28□□□□□ -0.28
NPLOC4-220ENST00000576940 TMC4Q7Z404 712 aa13.28□□□□□ -0.28
NPLOC4-220ENST00000576940 RTL9Q8NET4 1388 aa13.28□□□□□ -0.28
NPLOC4-220ENST00000576940 ATP5J2-PTCD1G3V325 749 aa13.27□□□□□ -0.29
NPLOC4-220ENST00000576940 SF3B3Q15393 1217 aaKnown RBP13.27□□□□□ -0.29
NPLOC4-220ENST00000576940 PNNQ9H307 717 aaKnown RBP13.27□□□□□ -0.29
NPLOC4-220ENST00000576940 SLC10A3P09131 477 aa13.26□□□□□ -0.29
NPLOC4-220ENST00000576940 RPS12P25398 132 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-220ENST00000576940 KIF4BQ2VIQ3 1234 aa13.26□□□□□ -0.29
NPLOC4-220ENST00000576940 SULF1Q8IWU6 871 aa13.26□□□□□ -0.29
NPLOC4-220ENST00000576940 TBC1D16Q8TBP0 767 aa13.26□□□□□ -0.29
NPLOC4-220ENST00000576940 CDCA5Q96FF9 252 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms