RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 ARHGEF15O94989 841 aa8.93□□□□□ -0.98
CDC27-219ENST00000576484 TMCO4Q5TGY1 634 aa8.93□□□□□ -0.98
CDC27-219ENST00000576484 GOLGA6L1Q8N7Z2 621 aa8.93□□□□□ -0.98
CDC27-219ENST00000576484 BHMTQ93088 406 aa8.93□□□□□ -0.98
CDC27-219ENST00000576484 FAM129BQ96TA1 746 aa8.93□□□□□ -0.98
CDC27-219ENST00000576484 RBCK1Q9BYM8 510 aa8.93□□□□□ -0.98
CDC27-219ENST00000576484 GDF2Q9UK05 429 aaPredicted RBP8.93□□□□□ -0.98
CDC27-219ENST00000576484 OIP5O43482 229 aa8.92□□□□□ -0.98
CDC27-219ENST00000576484 IGHA2P01877 340 aa8.92□□□□□ -0.98
CDC27-219ENST00000576484 NFKB1P19838 968 aa8.92□□□□□ -0.98
CDC27-219ENST00000576484 AMPD1P23109 780 aa8.92□□□□□ -0.98
CDC27-219ENST00000576484 USP5P45974 858 aa8.92□□□□□ -0.98
CDC27-219ENST00000576484 CCDC27Q2M243 656 aa8.92□□□□□ -0.98
CDC27-219ENST00000576484 ZNF468Q5VIY5 522 aaPredicted RBP8.92□□□□□ -0.98
CDC27-219ENST00000576484 C1orf229Q6ZS94 237 aaPredicted RBP8.92□□□□□ -0.98
CDC27-219ENST00000576484 EDARADDQ8WWZ3 215 aa8.92□□□□□ -0.98
CDC27-219ENST00000576484 ZFATQ9P243 1243 aa8.92□□□□□ -0.98
CDC27-219ENST00000576484 FNDC3AQ9Y2H6 1198 aaKnown RBP8.92□□□□□ -0.98
CDC27-219ENST00000576484 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.92□□□□□ -0.98
CDC27-219ENST00000576484 GPR182O15218 404 aa8.91□□□□□ -0.98
CDC27-219ENST00000576484 RPLP1P05386 114 aaKnown RBP8.91□□□□□ -0.98
CDC27-219ENST00000576484 ARAFP10398 606 aa8.91□□□□□ -0.98
CDC27-219ENST00000576484 TARSP26639 723 aaKnown RBP8.91□□□□□ -0.98
CDC27-219ENST00000576484 TMC7Q7Z402 723 aa8.91□□□□□ -0.98
CDC27-219ENST00000576484 SYT9Q86SS6 491 aa8.91□□□□□ -0.98
CDC27-219ENST00000576484 PNMA5Q96PV4 448 aa8.91□□□□□ -0.98
CDC27-219ENST00000576484 CITED4Q96RK1 184 aa8.91□□□□□ -0.98
CDC27-219ENST00000576484 RRAGCQ9HB90 399 aa8.91□□□□□ -0.98
CDC27-219ENST00000576484 TMEM63CQ9P1W3 806 aa8.91□□□□□ -0.98
CDC27-219ENST00000576484 KLF15Q9UIH9 416 aa8.91□□□□□ -0.98
CDC27-219ENST00000576484 SHISA8B8ZZ34 492 aa8.9□□□□□ -0.98
CDC27-219ENST00000576484 ADH6P28332 368 aa8.9□□□□□ -0.98
CDC27-219ENST00000576484 TBC1D8BQ0IIM8 1120 aa8.9□□□□□ -0.98
CDC27-219ENST00000576484 PDE12Q6L8Q7 609 aaKnown RBP8.9□□□□□ -0.98
CDC27-219ENST00000576484 ZNF438Q7Z4V0 828 aa8.9□□□□□ -0.98
CDC27-219ENST00000576484 NLRP13Q86W25 1043 aa8.9□□□□□ -0.98
CDC27-219ENST00000576484 RARAP10276 462 aa8.89□□□□□ -0.99
CDC27-219ENST00000576484 EHHADHQ08426 723 aa8.89□□□□□ -0.99
CDC27-219ENST00000576484 XKR5Q6UX68 686 aa8.89□□□□□ -0.99
CDC27-219ENST00000576484 DNAJC14Q6Y2X3 702 aaPredicted RBP8.89□□□□□ -0.99
CDC27-219ENST00000576484 TTC16Q8NEE8 873 aa8.89□□□□□ -0.99
CDC27-219ENST00000576484 TMC1Q8TDI8 760 aa8.89□□□□□ -0.99
CDC27-219ENST00000576484 ASB16Q96NS5 453 aa8.89□□□□□ -0.99
CDC27-219ENST00000576484 IGFLR1Q9H665 355 aa8.89□□□□□ -0.99
CDC27-219ENST00000576484 ELP3Q9H9T3 547 aa8.89□□□□□ -0.99
CDC27-219ENST00000576484 AVENQ9NQS1 362 aaPredicted RBP8.89□□□□□ -0.99
CDC27-219ENST00000576484 PDE3BQ13370 1112 aa8.88□□□□□ -0.99
CDC27-219ENST00000576484 NEUROD1Q13562 356 aa8.88□□□□□ -0.99
CDC27-219ENST00000576484 SLCO4C1Q6ZQN7 724 aa8.88□□□□□ -0.99
CDC27-219ENST00000576484 EFCC1Q9HA90 598 aa8.88□□□□□ -0.99
CDC27-219ENST00000576484 MMP20O60882 483 aa8.87□□□□□ -0.99
CDC27-219ENST00000576484 SIN3BO75182 1162 aa8.87□□□□□ -0.99
CDC27-219ENST00000576484 MFAP1P55081 439 aaKnown RBP8.87□□□□□ -0.99
CDC27-219ENST00000576484 FCHSD1Q86WN1 690 aa8.87□□□□□ -0.99
CDC27-219ENST00000576484 ABI2Q9NYB9 513 aaPredicted RBP8.87□□□□□ -0.99
CDC27-219ENST00000576484 FOXD3Q9UJU5 478 aaPredicted RBP8.87□□□□□ -0.99
CDC27-219ENST00000576484 CNTNAP5Q8WYK1 1306 aa8.86□□□□□ -0.99
CDC27-219ENST00000576484 TNFRSF21O75509 655 aa8.86□□□□□ -0.99
CDC27-219ENST00000576484 MAP3K6O95382 1288 aa8.86□□□□□ -0.99
CDC27-219ENST00000576484 EPXP11678 715 aa8.86□□□□□ -0.99
CDC27-219ENST00000576484 DHX32Q7L7V1 743 aaKnown RBP8.86□□□□□ -0.99
CDC27-219ENST00000576484 ZSCAN29Q8IWY8 852 aaPredicted RBP8.86□□□□□ -0.99
CDC27-219ENST00000576484 DMRTB1Q96MA1 342 aa8.86□□□□□ -0.99
CDC27-219ENST00000576484 PODXL2Q9NZ53 605 aa8.86□□□□□ -0.99
CDC27-219ENST00000576484 TREHO43280 583 aa8.85□□□□□ -0.99
CDC27-219ENST00000576484 SNX29Q8TEQ0 813 aa8.85□□□□□ -0.99
CDC27-219ENST00000576484 ALKBH8Q96BT7 664 aaKnown RBP8.85□□□□□ -0.99
CDC27-219ENST00000576484 BTBD6Q96KE9 485 aa8.85□□□□□ -0.99
CDC27-219ENST00000576484 MDFIQ99750 246 aa8.85□□□□□ -0.99
CDC27-219ENST00000576484 NIF3L1Q9GZT8 377 aa8.85□□□□□ -0.99
CDC27-219ENST00000576484 CHRDQ9H2X0 955 aa8.85□□□□□ -0.99
CDC27-219ENST00000576484 CNTN3Q9P232 1028 aa8.85□□□□□ -0.99
CDC27-219ENST00000576484 ANKRD33BA6NCL7 494 aa8.84□□□□□ -0.99
CDC27-219ENST00000576484 CYP2E1P05181 493 aaPredicted RBP8.84□□□□□ -0.99
CDC27-219ENST00000576484 IRS1P35568 1242 aa8.84□□□□□ -0.99
CDC27-219ENST00000576484 ORC1Q13415 861 aa8.84□□□□□ -0.99
CDC27-219ENST00000576484 DSC3Q14574 896 aa8.84□□□□□ -0.99
CDC27-219ENST00000576484 PODNQ7Z5L7 613 aa8.84□□□□□ -0.99
CDC27-219ENST00000576484 C1orf127Q8N9H9 656 aa8.84□□□□□ -0.99
CDC27-219ENST00000576484 OR13H1Q8NG92 308 aa8.84□□□□□ -0.99
CDC27-219ENST00000576484 TNFRSF25Q93038 417 aa8.84□□□□□ -0.99
CDC27-219ENST00000576484 UBE2OQ9C0C9 1292 aaKnown RBP8.84□□□□□ -0.99
CDC27-219ENST00000576484 LRRC4BQ9NT99 713 aa8.84□□□□□ -0.99
CDC27-219ENST00000576484 TLR7Q9NYK1 1049 aaKnown RBP8.84□□□□□ -0.99
CDC27-219ENST00000576484 ALAS2P22557 587 aa8.83□□□□□ -1
CDC27-219ENST00000576484 SOX18P35713 384 aa8.83□□□□□ -1
CDC27-219ENST00000576484 SNRPNP63162 240 aaKnown RBP8.83□□□□□ -1
CDC27-219ENST00000576484 TTC39BQ5VTQ0 682 aaPredicted RBP8.83□□□□□ -1
CDC27-219ENST00000576484 SCARF2Q96GP6 870 aaPredicted RBP8.83□□□□□ -1
CDC27-219ENST00000576484 DNAJB12Q9NXW2 375 aaKnown RBP8.83□□□□□ -1
CDC27-219ENST00000576484 ZBTB42B2RXF5 422 aa8.82□□□□□ -1
CDC27-219ENST00000576484 PHACTR2O75167 634 aa8.82□□□□□ -1
CDC27-219ENST00000576484 PSAPP07602 524 aa8.82□□□□□ -1
CDC27-219ENST00000576484 FMR1Q06787 632 aaKnown RBP eCLIP8.82□□□□□ -1
CDC27-219ENST00000576484 CHSY3Q70JA7 882 aa8.82□□□□□ -1
CDC27-219ENST00000576484 NPAS4Q8IUM7 802 aa8.82□□□□□ -1
CDC27-219ENST00000576484 BEND7Q8N7W2 519 aaPredicted RBP8.82□□□□□ -1
CDC27-219ENST00000576484 NSUN5Q96P11 429 aaKnown RBP8.82□□□□□ -1
CDC27-219ENST00000576484 KANSL3Q9P2N6 904 aa8.82□□□□□ -1
CDC27-219ENST00000576484 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms