RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 PRAMEF22A3QJZ6 481 aa9.96□□□□□ -0.82
RAB40B-210ENST00000576148 HOXA10P31260 410 aaPredicted RBP9.96□□□□□ -0.82
RAB40B-210ENST00000576148 GPR153Q6NV75 609 aa9.96□□□□□ -0.82
RAB40B-210ENST00000576148 AEBP1Q8IUX7 1158 aa9.96□□□□□ -0.82
RAB40B-210ENST00000576148 ERO1AQ96HE7 468 aa9.96□□□□□ -0.82
RAB40B-210ENST00000576148 RBM17Q96I25 401 aaKnown RBP9.96□□□□□ -0.82
RAB40B-210ENST00000576148 ZNF333Q96JL9 665 aa9.96□□□□□ -0.82
RAB40B-210ENST00000576148 TESK2Q96S53 571 aa9.96□□□□□ -0.82
RAB40B-210ENST00000576148 EFCC1Q9HA90 598 aa9.96□□□□□ -0.82
RAB40B-210ENST00000576148 ZBTB12Q9Y330 459 aaPredicted RBP9.96□□□□□ -0.82
RAB40B-210ENST00000576148 NR2E3Q9Y5X4 410 aa9.96□□□□□ -0.82
RAB40B-210ENST00000576148 UNC80Q8N2C7 3258 aa9.95□□□□□ -0.82
RAB40B-210ENST00000576148 UBE2Q2LH0YL09 131 aa9.95□□□□□ -0.82
RAB40B-210ENST00000576148 MKRN3Q13064 507 aaKnown RBP9.95□□□□□ -0.82
RAB40B-210ENST00000576148 CRAMP1Q96RY5 1269 aa9.95□□□□□ -0.82
RAB40B-210ENST00000576148 MRC1P22897 1456 aa9.95□□□□□ -0.82
RAB40B-210ENST00000576148 ERBB4Q15303 1308 aa9.94□□□□□ -0.82
RAB40B-210ENST00000576148 KIF7Q2M1P5 1343 aa9.94□□□□□ -0.82
RAB40B-210ENST00000576148 WTIPA6NIX2 430 aaPredicted RBP9.94□□□□□ -0.82
RAB40B-210ENST00000576148 EGFRP00533 1210 aa9.94□□□□□ -0.82
RAB40B-210ENST00000576148 PLA2G5P39877 138 aa9.94□□□□□ -0.82
RAB40B-210ENST00000576148 KIAA2012Q0VF49 1180 aa9.94□□□□□ -0.82
RAB40B-210ENST00000576148 SLC9C1Q4G0N8 1177 aa9.94□□□□□ -0.82
RAB40B-210ENST00000576148 SULT6B1Q6IMI4 303 aa9.94□□□□□ -0.82
RAB40B-210ENST00000576148 FAM122AQ96E09 287 aa9.94□□□□□ -0.82
RAB40B-210ENST00000576148 ZNF496Q96IT1 587 aaPredicted RBP9.94□□□□□ -0.82
RAB40B-210ENST00000576148 CARD14Q9BXL6 1004 aa9.94□□□□□ -0.82
RAB40B-210ENST00000576148 RTFDC1Q9BY42 306 aaPredicted RBP9.94□□□□□ -0.82
RAB40B-210ENST00000576148 GGA3Q9NZ52 723 aa9.94□□□□□ -0.82
RAB40B-210ENST00000576148 CENPFP49454 3210 aa9.94□□□□□ -0.82
RAB40B-210ENST00000576148 HEG1Q9ULI3 1381 aa9.93□□□□□ -0.82
RAB40B-210ENST00000576148 DPP8Q6V1X1 898 aaPredicted RBP9.93□□□□□ -0.82
RAB40B-210ENST00000576148 MOB2Q70IA6 237 aa9.93□□□□□ -0.82
RAB40B-210ENST00000576148 SLC51AQ86UW1 340 aa9.93□□□□□ -0.82
RAB40B-210ENST00000576148 CD99L2Q8TCZ2 262 aa9.93□□□□□ -0.82
RAB40B-210ENST00000576148 HTATIP2Q9BUP3 242 aa9.93□□□□□ -0.82
RAB40B-210ENST00000576148 NYXQ9GZU5 481 aa9.93□□□□□ -0.82
RAB40B-210ENST00000576148 ATP6V0A2Q9Y487 856 aa9.93□□□□□ -0.82
RAB40B-210ENST00000576148 KIF20BQ96Q89 1820 aa9.93□□□□□ -0.82
RAB40B-210ENST00000576148 RGL2O15211 777 aa9.92□□□□□ -0.82
RAB40B-210ENST00000576148 MYCP01106 439 aaPredicted RBP9.92□□□□□ -0.82
RAB40B-210ENST00000576148 RPS12P25398 132 aaKnown RBP9.92□□□□□ -0.82
RAB40B-210ENST00000576148 TCIRG1Q13488 830 aa9.92□□□□□ -0.82
RAB40B-210ENST00000576148 TTLL12Q14166 644 aaPredicted RBP9.92□□□□□ -0.82
RAB40B-210ENST00000576148 KIF4BQ2VIQ3 1234 aa9.92□□□□□ -0.82
RAB40B-210ENST00000576148 Q7L0L9 218 aa9.92□□□□□ -0.82
RAB40B-210ENST00000576148 MTMR10Q9NXD2 777 aa9.92□□□□□ -0.82
RAB40B-210ENST00000576148 YDJCA8MPS7 323 aa9.91□□□□□ -0.82
RAB40B-210ENST00000576148 PSMD14O00487 310 aa9.91□□□□□ -0.82
RAB40B-210ENST00000576148 INHBEP58166 350 aa9.91□□□□□ -0.82
RAB40B-210ENST00000576148 NEUROD1Q13562 356 aa9.91□□□□□ -0.82
RAB40B-210ENST00000576148 ZNF790Q6PG37 636 aa9.91□□□□□ -0.82
RAB40B-210ENST00000576148 NUTM1Q86Y26 1132 aa9.91□□□□□ -0.82
RAB40B-210ENST00000576148 ZBTB7BO15156 539 aaPredicted RBP9.9□□□□□ -0.82
RAB40B-210ENST00000576148 PIP4K2AP48426 406 aaPredicted RBP9.9□□□□□ -0.82
RAB40B-210ENST00000576148 ARHGEF6Q15052 776 aa9.9□□□□□ -0.82
RAB40B-210ENST00000576148 ANGEL2Q5VTE6 544 aaKnown RBP9.9□□□□□ -0.82
RAB40B-210ENST00000576148 FMNL2Q96PY5 1086 aa9.9□□□□□ -0.82
RAB40B-210ENST00000576148 SIN3AQ96ST3 1273 aa9.9□□□□□ -0.82
RAB40B-210ENST00000576148 ABCC12Q96J65 1359 aa9.89□□□□□ -0.83
RAB40B-210ENST00000576148 ASTN2O75129 1339 aaPredicted RBP9.89□□□□□ -0.83
RAB40B-210ENST00000576148 MANSC4A6NHS7 340 aaPredicted RBP9.89□□□□□ -0.83
RAB40B-210ENST00000576148 SP3Q02447 781 aa9.89□□□□□ -0.83
RAB40B-210ENST00000576148 IFNL1Q8IU54 200 aa9.89□□□□□ -0.83
RAB40B-210ENST00000576148 STAP2Q9UGK3 403 aa9.89□□□□□ -0.83
RAB40B-210ENST00000576148 ZNF609O15014 1411 aa9.89□□□□□ -0.83
RAB40B-210ENST00000576148 LAMA3Q16787 3333 aa9.89□□□□□ -0.83
RAB40B-210ENST00000576148 HOXD11P31277 338 aaPredicted RBP9.88□□□□□ -0.83
RAB40B-210ENST00000576148 SCARF1Q14162 830 aa9.88□□□□□ -0.83
RAB40B-210ENST00000576148 CDCA8Q53HL2 280 aa9.88□□□□□ -0.83
RAB40B-210ENST00000576148 SPRYD7Q5W111 196 aa9.88□□□□□ -0.83
RAB40B-210ENST00000576148 SP8Q8IXZ3 490 aa9.88□□□□□ -0.83
RAB40B-210ENST00000576148 RAPGEFL1Q9UHV5 662 aa9.88□□□□□ -0.83
RAB40B-210ENST00000576148 PTCH2Q9Y6C5 1203 aa9.88□□□□□ -0.83
RAB40B-210ENST00000576148 RIC1Q4ADV7 1423 aa9.88□□□□□ -0.83
RAB40B-210ENST00000576148 POLR2AP24928 1970 aaKnown RBP9.88□□□□□ -0.83
RAB40B-210ENST00000576148 VCANP13611 3396 aa9.88□□□□□ -0.83
RAB40B-210ENST00000576148 BBOX1O75936 387 aa9.87□□□□□ -0.83
RAB40B-210ENST00000576148 NF2P35240 595 aa9.87□□□□□ -0.83
RAB40B-210ENST00000576148 TEFQ10587 303 aa9.87□□□□□ -0.83
RAB40B-210ENST00000576148 HLFQ16534 295 aa9.87□□□□□ -0.83
RAB40B-210ENST00000576148 EVI5O60447 810 aa9.86□□□□□ -0.83
RAB40B-210ENST00000576148 PTPN12Q05209 780 aaKnown RBP9.86□□□□□ -0.83
RAB40B-210ENST00000576148 OTUD7BQ6GQQ9 843 aa9.86□□□□□ -0.83
RAB40B-210ENST00000576148 ARMC9Q7Z3E5 817 aa9.86□□□□□ -0.83
RAB40B-210ENST00000576148 NKX2-3Q8TAU0 364 aa9.86□□□□□ -0.83
RAB40B-210ENST00000576148 SYMPKQ92797 1274 aaKnown RBP9.86□□□□□ -0.83
RAB40B-210ENST00000576148 NLRP3Q96P20 1036 aa9.86□□□□□ -0.83
RAB40B-210ENST00000576148 USP16Q9Y5T5 823 aa9.86□□□□□ -0.83
RAB40B-210ENST00000576148 RPTORQ8N122 1335 aa9.85□□□□□ -0.83
RAB40B-210ENST00000576148 CRHR2Q13324 411 aa9.85□□□□□ -0.83
RAB40B-210ENST00000576148 WASHC4Q2M389 1173 aa9.85□□□□□ -0.83
RAB40B-210ENST00000576148 PRAMEF18Q5VWM3 479 aa9.85□□□□□ -0.83
RAB40B-210ENST00000576148 SH3TC2Q8TF17 1288 aa9.85□□□□□ -0.83
RAB40B-210ENST00000576148 SHISA4Q96DD7 197 aa9.85□□□□□ -0.83
RAB40B-210ENST00000576148 DBNDD1Q9H9R9 158 aa9.85□□□□□ -0.83
RAB40B-210ENST00000576148 UBR2Q8IWV8 1755 aa9.85□□□□□ -0.83
RAB40B-210ENST00000576148 IGF2BP3O00425 579 aaKnown RBP eCLIP9.84□□□□□ -0.83
RAB40B-210ENST00000576148 BMP8BP34820 402 aa9.84□□□□□ -0.83
RAB40B-210ENST00000576148 MTHFSDQ2M296 383 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms