RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 SHTN1A0MZ66 631 aa27.32■■□□□ 1.96
SPNS3-203ENST00000575185 RAD17O75943 681 aa27.32■■□□□ 1.96
SPNS3-203ENST00000575185 HCLS1P14317 486 aaPredicted RBP27.32■■□□□ 1.96
SPNS3-203ENST00000575185 MAP2K2P36507 400 aa27.32■■□□□ 1.96
SPNS3-203ENST00000575185 HIRAP54198 1017 aaPredicted RBP27.32■■□□□ 1.96
SPNS3-203ENST00000575185 SUPT20HQ8NEM7 779 aa27.32■■□□□ 1.96
SPNS3-203ENST00000575185 TRPM4Q8TD43 1214 aa27.32■■□□□ 1.96
SPNS3-203ENST00000575185 MAPK8IP3Q9UPT6 1336 aa27.32■■□□□ 1.96
SPNS3-203ENST00000575185 CIAPIN1Q6FI81 312 aa27.31■■□□□ 1.96
SPNS3-203ENST00000575185 KIAA2012Q0VF49 1180 aa27.3■■□□□ 1.96
SPNS3-203ENST00000575185 MPNDQ8N594 471 aa27.3■■□□□ 1.96
SPNS3-203ENST00000575185 ZNF428Q96B54 188 aa27.3■■□□□ 1.96
SPNS3-203ENST00000575185 SLC34A2O95436 690 aa27.29■■□□□ 1.96
SPNS3-203ENST00000575185 SP8Q8IXZ3 490 aa27.29■■□□□ 1.96
SPNS3-203ENST00000575185 NECTIN2Q92692 538 aa27.29■■□□□ 1.96
SPNS3-203ENST00000575185 BCL2L13Q9BXK5 485 aa27.29■■□□□ 1.96
SPNS3-203ENST00000575185 PGAP2Q9UHJ9 254 aa27.29■■□□□ 1.96
SPNS3-203ENST00000575185 COL4A1P02462 1669 aa27.28■■□□□ 1.96
SPNS3-203ENST00000575185 CDHR2Q9BYE9 1310 aa27.28■■□□□ 1.96
SPNS3-203ENST00000575185 YDJCA8MPS7 323 aa27.28■■□□□ 1.96
SPNS3-203ENST00000575185 NLRP10Q86W26 655 aa27.28■■□□□ 1.96
SPNS3-203ENST00000575185 BBOX1O75936 387 aa27.27■■□□□ 1.96
SPNS3-203ENST00000575185 AIMP1Q12904 312 aaKnown RBP27.27■■□□□ 1.96
SPNS3-203ENST00000575185 DLK2Q6UY11 383 aa27.27■■□□□ 1.96
SPNS3-203ENST00000575185 TNRC18O15417 2968 aaPredicted RBP27.27■■□□□ 1.96
SPNS3-203ENST00000575185 MLLT1Q03111 559 aaPredicted RBP27.26■■□□□ 1.95
SPNS3-203ENST00000575185 COPS6Q7L5N1 327 aa27.26■■□□□ 1.95
SPNS3-203ENST00000575185 XAGE3Q8WTP9 111 aa27.26■■□□□ 1.95
SPNS3-203ENST00000575185 BRPF1P55201 1214 aaPredicted RBP27.25■■□□□ 1.95
SPNS3-203ENST00000575185 GRAPQ13588 217 aa27.25■■□□□ 1.95
SPNS3-203ENST00000575185 DDX46Q7L014 1031 aaKnown RBP27.25■■□□□ 1.95
SPNS3-203ENST00000575185 GRAPLQ8TC17 118 aaPredicted RBP27.25■■□□□ 1.95
SPNS3-203ENST00000575185 HHIPL1Q96JK4 782 aa27.25■■□□□ 1.95
SPNS3-203ENST00000575185 ZIC5Q96T25 663 aa27.25■■□□□ 1.95
SPNS3-203ENST00000575185 MCOLN1Q9GZU1 580 aa27.25■■□□□ 1.95
SPNS3-203ENST00000575185 POLR2AP24928 1970 aaKnown RBP27.25■■□□□ 1.95
SPNS3-203ENST00000575185 TNIP1Q15025 636 aa27.24■■□□□ 1.95
SPNS3-203ENST00000575185 ZC3H15Q8WU90 426 aaKnown RBP27.24■■□□□ 1.95
SPNS3-203ENST00000575185 TRMT112Q9UI30 125 aaKnown RBP27.24■■□□□ 1.95
SPNS3-203ENST00000575185 CNOT7Q9UIV1 285 aaKnown RBP27.24■■□□□ 1.95
SPNS3-203ENST00000575185 RGS19P49795 217 aa27.23■■□□□ 1.95
SPNS3-203ENST00000575185 MICALL2Q8IY33 904 aa27.23■■□□□ 1.95
SPNS3-203ENST00000575185 ZBTB12Q9Y330 459 aaPredicted RBP27.23■■□□□ 1.95
SPNS3-203ENST00000575185 SH3TC1Q8TE82 1336 aa27.22■■□□□ 1.95
SPNS3-203ENST00000575185 CA12O43570 354 aa27.22■■□□□ 1.95
SPNS3-203ENST00000575185 RIPK4P57078 832 aa27.22■■□□□ 1.95
SPNS3-203ENST00000575185 HSP90AB3PQ58FF7 597 aa27.22■■□□□ 1.95
SPNS3-203ENST00000575185 CDC37L1Q7L3B6 337 aa27.22■■□□□ 1.95
SPNS3-203ENST00000575185 CFAP44Q96MT7 982 aa27.22■■□□□ 1.95
SPNS3-203ENST00000575185 TCIRG1Q13488 830 aa27.21■■□□□ 1.95
SPNS3-203ENST00000575185 KRT24Q2M2I5 525 aa27.21■■□□□ 1.95
SPNS3-203ENST00000575185 USP48Q86UV5 1035 aa27.21■■□□□ 1.95
SPNS3-203ENST00000575185 PNNQ9H307 717 aaKnown RBP27.21■■□□□ 1.95
SPNS3-203ENST00000575185 EGFRP00533 1210 aa27.19■■□□□ 1.94
SPNS3-203ENST00000575185 SAMD7Q7Z3H4 446 aa27.19■■□□□ 1.94
SPNS3-203ENST00000575185 H7C1D1 291 aa27.18■■□□□ 1.94
SPNS3-203ENST00000575185 PSMD14O00487 310 aa27.18■■□□□ 1.94
SPNS3-203ENST00000575185 HUNKP57058 714 aa27.18■■□□□ 1.94
SPNS3-203ENST00000575185 DBNDD1Q9H9R9 158 aa27.18■■□□□ 1.94
SPNS3-203ENST00000575185 SCN9AQ15858 1988 aa27.17■■□□□ 1.94
SPNS3-203ENST00000575185 DGKZQ13574 1117 aa27.17■■□□□ 1.94
SPNS3-203ENST00000575185 TBC1D10BQ4KMP7 808 aaPredicted RBP27.17■■□□□ 1.94
SPNS3-203ENST00000575185 NOGQ13253 232 aa27.16■■□□□ 1.94
SPNS3-203ENST00000575185 CELF1Q92879 486 aaKnown RBP27.16■■□□□ 1.94
SPNS3-203ENST00000575185 BABAM1Q9NWV8 329 aa27.16■■□□□ 1.94
SPNS3-203ENST00000575185 RIMBP2O15034 1052 aa27.15■■□□□ 1.94
SPNS3-203ENST00000575185 TMPOP42166 694 aaKnown RBP27.15■■□□□ 1.94
SPNS3-203ENST00000575185 CHPF2Q9P2E5 772 aa27.15■■□□□ 1.94
SPNS3-203ENST00000575185 ADM5C9JUS6 153 aa27.14■■□□□ 1.94
SPNS3-203ENST00000575185 WASHC4Q2M389 1173 aa27.14■■□□□ 1.94
SPNS3-203ENST00000575185 TMC4Q7Z404 712 aa27.14■■□□□ 1.94
SPNS3-203ENST00000575185 KCNQ5Q9NR82 932 aa27.14■■□□□ 1.94
SPNS3-203ENST00000575185 NSFL1CQ9UNZ2 370 aaKnown RBP27.14■■□□□ 1.94
SPNS3-203ENST00000575185 RTL9Q8NET4 1388 aa27.13■■□□□ 1.93
SPNS3-203ENST00000575185 KRT26Q7Z3Y9 468 aa27.13■■□□□ 1.93
SPNS3-203ENST00000575185 DPF2Q92785 391 aa27.13■■□□□ 1.93
SPNS3-203ENST00000575185 FAM89AQ96GI7 184 aa27.13■■□□□ 1.93
SPNS3-203ENST00000575185 POLLQ9UGP5 575 aa27.13■■□□□ 1.93
SPNS3-203ENST00000575185 FAM155AB1AL88 458 aaPredicted RBP27.12■■□□□ 1.93
SPNS3-203ENST00000575185 GPSM2P81274 684 aa27.12■■□□□ 1.93
SPNS3-203ENST00000575185 AKAP11Q9UKA4 1901 aa27.12■■□□□ 1.93
SPNS3-203ENST00000575185 ATP5J2-PTCD1G3V325 749 aa27.11■■□□□ 1.93
SPNS3-203ENST00000575185 DOK7Q18PE1 504 aa27.11■■□□□ 1.93
SPNS3-203ENST00000575185 RTL5Q5HYW3 569 aaPredicted RBP27.11■■□□□ 1.93
SPNS3-203ENST00000575185 RBM26Q5T8P6 1007 aaKnown RBP27.11■■□□□ 1.93
SPNS3-203ENST00000575185 C6orf229H3BNL8 230 aa27.1■■□□□ 1.93
SPNS3-203ENST00000575185 ECE2O60344 883 aa27.1■■□□□ 1.93
SPNS3-203ENST00000575185 LMOD3Q0VAK6 560 aa27.1■■□□□ 1.93
SPNS3-203ENST00000575185 NEUROD2Q15784 382 aa27.1■■□□□ 1.93
SPNS3-203ENST00000575185 RGMBQ6NW40 437 aa27.1■■□□□ 1.93
SPNS3-203ENST00000575185 GBA2Q9HCG7 927 aaPredicted RBP27.1■■□□□ 1.93
SPNS3-203ENST00000575185 CCDC146Q8IYE0 955 aa27.09■■□□□ 1.93
SPNS3-203ENST00000575185 PLBD2Q8NHP8 589 aa27.09■■□□□ 1.93
SPNS3-203ENST00000575185 ISCA1Q9BUE6 129 aa27.09■■□□□ 1.93
SPNS3-203ENST00000575185 LAS1LQ9Y4W2 734 aaKnown RBP27.09■■□□□ 1.93
SPNS3-203ENST00000575185 SF3B3Q15393 1217 aaKnown RBP27.08■■□□□ 1.93
SPNS3-203ENST00000575185 PSME4Q14997 1843 aa27.07■■□□□ 1.92
SPNS3-203ENST00000575185 CHL1O00533 1208 aa27.07■■□□□ 1.92
SPNS3-203ENST00000575185 HDGFL1Q5TGJ6 251 aa27.07■■□□□ 1.92
SPNS3-203ENST00000575185 ASTN2O75129 1339 aaPredicted RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms