RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 MEIS3Q99687 375 aa17■□□□□ 0.31
NDE1-209ENST00000574109 TAF1P21675 1872 aa16.99■□□□□ 0.31
NDE1-209ENST00000574109 SLX4Q8IY92 1834 aa16.99■□□□□ 0.31
NDE1-209ENST00000574109 GNAI2P04899 355 aa16.99■□□□□ 0.31
NDE1-209ENST00000574109 ALDH1B1P30837 517 aa16.99■□□□□ 0.31
NDE1-209ENST00000574109 RABL6Q3YEC7 729 aaPredicted RBP16.99■□□□□ 0.31
NDE1-209ENST00000574109 DDX46Q7L014 1031 aaKnown RBP16.99■□□□□ 0.31
NDE1-209ENST00000574109 TMC4Q7Z404 712 aa16.99■□□□□ 0.31
NDE1-209ENST00000574109 RBM17Q96I25 401 aaKnown RBP16.99■□□□□ 0.31
NDE1-209ENST00000574109 CRAMP1Q96RY5 1269 aa16.99■□□□□ 0.31
NDE1-209ENST00000574109 SYT17Q9BSW7 474 aa16.99■□□□□ 0.31
NDE1-209ENST00000574109 COG6Q9Y2V7 657 aa16.99■□□□□ 0.31
NDE1-209ENST00000574109 SUPT16HQ9Y5B9 1047 aaKnown RBP16.99■□□□□ 0.31
NDE1-209ENST00000574109 SYNE4Q8N205 404 aa16.98■□□□□ 0.31
NDE1-209ENST00000574109 CCDC24Q8N4L8 307 aa16.98■□□□□ 0.31
NDE1-209ENST00000574109 SUCLG2Q96I99 432 aa16.98■□□□□ 0.31
NDE1-209ENST00000574109 CDC5LQ99459 802 aaKnown RBP16.98■□□□□ 0.31
NDE1-209ENST00000574109 ZBTB7BO15156 539 aaPredicted RBP16.97■□□□□ 0.31
NDE1-209ENST00000574109 CSF1RP07333 972 aa16.97■□□□□ 0.31
NDE1-209ENST00000574109 TTLL11Q8NHH1 800 aa16.97■□□□□ 0.31
NDE1-209ENST00000574109 BICC1Q9H694 974 aaKnown RBP16.97■□□□□ 0.31
NDE1-209ENST00000574109 PIM2Q9P1W9 311 aa16.97■□□□□ 0.31
NDE1-209ENST00000574109 FER1L6Q2WGJ9 1857 aa16.97■□□□□ 0.31
NDE1-209ENST00000574109 DPEP1P16444 411 aa16.96■□□□□ 0.31
NDE1-209ENST00000574109 FOXO4P98177 505 aa16.96■□□□□ 0.31
NDE1-209ENST00000574109 MTX1Q13505 466 aa16.96■□□□□ 0.31
NDE1-209ENST00000574109 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
NDE1-209ENST00000574109 SOGA3Q5TF21 947 aa16.96■□□□□ 0.31
NDE1-209ENST00000574109 LRRFIP2Q9Y608 721 aaKnown RBP16.96■□□□□ 0.31
NDE1-209ENST00000574109 CHRNA5P30532 468 aa16.95■□□□□ 0.3
NDE1-209ENST00000574109 GRAPQ13588 217 aa16.95■□□□□ 0.3
NDE1-209ENST00000574109 TTLL6Q8N841 843 aa16.95■□□□□ 0.3
NDE1-209ENST00000574109 NLGN2Q8NFZ4 835 aa16.95■□□□□ 0.3
NDE1-209ENST00000574109 GRAPLQ8TC17 118 aaPredicted RBP16.95■□□□□ 0.3
NDE1-209ENST00000574109 LTBP1Q14766 1721 aa16.95■□□□□ 0.3
NDE1-209ENST00000574109 A0A0G2JLW4 131 aa16.94■□□□□ 0.3
NDE1-209ENST00000574109 IFIT5Q13325 482 aaKnown RBP16.94■□□□□ 0.3
NDE1-209ENST00000574109 CCDC57Q2TAC2 916 aa16.94■□□□□ 0.3
NDE1-209ENST00000574109 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
NDE1-209ENST00000574109 GRIPAP1Q4V328 841 aa16.94■□□□□ 0.3
NDE1-209ENST00000574109 DALRD3Q5D0E6 543 aaKnown RBP16.94■□□□□ 0.3
NDE1-209ENST00000574109 LMBR1LQ6UX01 489 aa16.94■□□□□ 0.3
NDE1-209ENST00000574109 C3orf67Q6ZVT6 689 aa16.94■□□□□ 0.3
NDE1-209ENST00000574109 JARID2Q92833 1246 aaPredicted RBP16.94■□□□□ 0.3
NDE1-209ENST00000574109 ZNF622Q969S3 477 aaKnown RBP eCLIP16.94■□□□□ 0.31e-8■□□□□ 8.5
NDE1-209ENST00000574109 KAZALD1Q96I82 304 aa16.94■□□□□ 0.3
NDE1-209ENST00000574109 ZBTB40Q9NUA8 1239 aa16.94■□□□□ 0.3
NDE1-209ENST00000574109 ANKRD18BA2A2Z9 1011 aa16.93■□□□□ 0.3
NDE1-209ENST00000574109 BBOX1O75936 387 aa16.93■□□□□ 0.3
NDE1-209ENST00000574109 KCNA3P22001 575 aa16.93■□□□□ 0.3
NDE1-209ENST00000574109 ITGA6P23229 1130 aa16.93■□□□□ 0.3
NDE1-209ENST00000574109 CC2D2BQ6DHV5 1058 aa16.93■□□□□ 0.3
NDE1-209ENST00000574109 PRPF40BQ6NWY9 871 aaKnown RBP16.93■□□□□ 0.3
NDE1-209ENST00000574109 ANKRD18AQ8IVF6 992 aa16.93■□□□□ 0.3
NDE1-209ENST00000574109 ANKRD44Q8N8A2 993 aa16.93■□□□□ 0.3
NDE1-209ENST00000574109 TMX4Q9H1E5 349 aaPredicted RBP16.93■□□□□ 0.3
NDE1-209ENST00000574109 GREM2Q9H772 168 aa16.93■□□□□ 0.3
NDE1-209ENST00000574109 CHMP3Q9Y3E7 222 aa16.93■□□□□ 0.3
NDE1-209ENST00000574109 PPEF1O14829 653 aaPredicted RBP16.92■□□□□ 0.3
NDE1-209ENST00000574109 IGHMBP2P38935 993 aaKnown RBP16.92■□□□□ 0.3
NDE1-209ENST00000574109 TAF7LQ5H9L4 462 aa16.92■□□□□ 0.3
NDE1-209ENST00000574109 FBXO3Q9UK99 471 aa16.92■□□□□ 0.3
NDE1-209ENST00000574109 GOLGB1Q14789 3259 aaKnown RBP16.92■□□□□ 0.3
NDE1-209ENST00000574109 NEFLP07196 543 aa16.91■□□□□ 0.3
NDE1-209ENST00000574109 EPHA10Q5JZY3 1008 aa16.91■□□□□ 0.3
NDE1-209ENST00000574109 DICER1Q9UPY3 1922 aaKnown RBP16.91■□□□□ 0.3
NDE1-209ENST00000574109 CHD4Q14839 1912 aa16.9■□□□□ 0.3
NDE1-209ENST00000574109 HMMRO75330 724 aa16.9■□□□□ 0.3
NDE1-209ENST00000574109 RPS8P62241 208 aaKnown RBP16.9■□□□□ 0.3
NDE1-209ENST00000574109 RPAP2Q8IXW5 612 aaPredicted RBP16.9■□□□□ 0.3
NDE1-209ENST00000574109 CRBNQ96SW2 442 aa16.9■□□□□ 0.3
NDE1-209ENST00000574109 MPHOSPH8Q99549 860 aa16.9■□□□□ 0.3
NDE1-209ENST00000574109 COL4A1P02462 1669 aa16.9■□□□□ 0.3
NDE1-209ENST00000574109 ARAP2Q8WZ64 1704 aa16.9■□□□□ 0.3
NDE1-209ENST00000574109 DCAF8L1A6NGE4 600 aa16.89■□□□□ 0.29
NDE1-209ENST00000574109 CCDC93Q567U6 631 aa16.89■□□□□ 0.29
NDE1-209ENST00000574109 BSDC1Q9NW68 430 aaPredicted RBP16.89■□□□□ 0.29
NDE1-209ENST00000574109 SRGAP3O43295 1099 aa16.88■□□□□ 0.29
NDE1-209ENST00000574109 CEP85Q6P2H3 762 aa16.88■□□□□ 0.29
NDE1-209ENST00000574109 CCDC85AQ96PX6 553 aaPredicted RBP16.88■□□□□ 0.29
NDE1-209ENST00000574109 BCS1LQ9Y276 419 aa16.88■□□□□ 0.29
NDE1-209ENST00000574109 ATP6V0A2Q9Y487 856 aa16.88■□□□□ 0.29
NDE1-209ENST00000574109 SBF1O95248 1867 aa16.88■□□□□ 0.29
NDE1-209ENST00000574109 CCDC88AQ3V6T2 1871 aa16.88■□□□□ 0.29
NDE1-209ENST00000574109 SNED1Q8TER0 1413 aa16.87■□□□□ 0.29
NDE1-209ENST00000574109 CELF1Q92879 486 aaKnown RBP16.87■□□□□ 0.29
NDE1-209ENST00000574109 SEC31BQ9NQW1 1179 aa16.87■□□□□ 0.29
NDE1-209ENST00000574109 DUOX1Q9NRD9 1551 aa16.86■□□□□ 0.29
NDE1-209ENST00000574109 GRIN3BO60391 1043 aa16.86■□□□□ 0.29
NDE1-209ENST00000574109 CIAO1O76071 339 aa16.86■□□□□ 0.29
NDE1-209ENST00000574109 ATP8B2P98198 1209 aa16.86■□□□□ 0.29
NDE1-209ENST00000574109 POLA2Q14181 598 aa16.86■□□□□ 0.29
NDE1-209ENST00000574109 SP8Q8IXZ3 490 aa16.86■□□□□ 0.29
NDE1-209ENST00000574109 RTKN2Q8IZC4 609 aa16.86■□□□□ 0.29
NDE1-209ENST00000574109 SSH3Q8TE77 659 aa16.86■□□□□ 0.29
NDE1-209ENST00000574109 C1orf115Q9H7X2 142 aa16.86■□□□□ 0.29
NDE1-209ENST00000574109 COPRSQ9NQ92 184 aa16.86■□□□□ 0.29
NDE1-209ENST00000574109 TIAM2Q8IVF5 1701 aa16.86■□□□□ 0.29
NDE1-209ENST00000574109 LTBP3Q9NS15 1303 aa16.86■□□□□ 0.29
NDE1-209ENST00000574109 MYH13Q9UKX3 1938 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms