RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 GBP2P32456 591 aaPredicted RBP2.95□□□□□ -1.94
CHD3-217ENST00000574022 ETFBP38117 255 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 NASPP49321 788 aaPredicted RBP2.95□□□□□ -1.94
CHD3-217ENST00000574022 IDH3AP50213 366 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 CHMP4BP1P59074 171 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 CBLBQ13191 982 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 PWP1Q13610 501 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 GNASQ5JWF2 1037 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 ANKS3Q6ZW76 656 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 FILIP1Q7Z7B0 1213 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 CMTR1Q8N1G2 835 aaKnown RBP2.95□□□□□ -1.94
CHD3-217ENST00000574022 RHBDD1Q8TEB9 315 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 CPLX3Q8WVH0 158 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 SUSD3Q96L08 255 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 RNPC3Q96LT9 517 aaKnown RBP2.95□□□□□ -1.94
CHD3-217ENST00000574022 NPHS2Q9NP85 383 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 IFT57Q9NWB7 429 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 ANKIB1Q9P2G1 1089 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 ADAMTS1Q9UHI8 967 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 TTF2Q9UNY4 1162 aaKnown RBP2.95□□□□□ -1.94
CHD3-217ENST00000574022 R3HCC1Q9Y3T6 440 aaKnown RBP2.95□□□□□ -1.94
CHD3-217ENST00000574022 COL4A3BPQ9Y5P4 624 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 MRVI1Q9Y6F6 885 aa2.95□□□□□ -1.94
CHD3-217ENST00000574022 POTEMA6NI47 508 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 DNAJC6O75061 913 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 RLBP1P12271 317 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 INPP5BP32019 993 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 EIF4A3P38919 411 aaKnown RBP2.94□□□□□ -1.94
CHD3-217ENST00000574022 PLA2G4AP47712 749 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 ARSDP51689 593 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 RAB33AQ14088 237 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 GRM2Q14416 872 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 CCDC85BQ15834 202 aaPredicted RBP2.94□□□□□ -1.94
CHD3-217ENST00000574022 NBPF1Q3BBV0 1214 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 SLC27A3Q5K4L6 730 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 IER5Q5VY09 327 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 NBPF10Q6P3W6 841 aaKnown RBP2.94□□□□□ -1.94
CHD3-217ENST00000574022 BICDL1Q6ZP65 573 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 Q6ZVU0 165 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 CERS3Q8IU89 383 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 GALNT12Q8IXK2 581 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 ZNF280CQ8ND82 737 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 ZNF296Q8WUU4 475 aaPredicted RBP2.94□□□□□ -1.94
CHD3-217ENST00000574022 C7orf43Q8WVR3 580 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 PMEPA1Q969W9 287 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 EAF1Q96JC9 268 aaPredicted RBP2.94□□□□□ -1.94
CHD3-217ENST00000574022 AGBL1Q96MI9 1066 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 TMEM74Q96NL1 305 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 SLKQ9H2G2 1235 aaPredicted RBP2.94□□□□□ -1.94
CHD3-217ENST00000574022 SUV39H2Q9H5I1 410 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 ZNF395Q9H8N7 513 aaPredicted RBP2.94□□□□□ -1.94
CHD3-217ENST00000574022 SPC25Q9HBM1 224 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 GINM1Q9NU53 330 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 TMEM63CQ9P1W3 806 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 STRIP2Q9ULQ0 834 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 USP20Q9Y2K6 914 aa2.94□□□□□ -1.94
CHD3-217ENST00000574022 RTCBQ9Y3I0 505 aaKnown RBP2.94□□□□□ -1.94
CHD3-217ENST00000574022 POTECB2RU33 542 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 F6X3S4 739 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 EREGO14944 169 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 KLF4O43474 513 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 TATP17735 454 aaPredicted RBP2.93□□□□□ -1.94
CHD3-217ENST00000574022 CES1P23141 567 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 SOX9P48436 509 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 RELBQ01201 579 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 KCNC4Q03721 635 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 NNTQ13423 1086 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 COL9A2Q14055 689 aaPredicted RBP2.93□□□□□ -1.94
CHD3-217ENST00000574022 TRIP4Q15650 581 aaPredicted RBP2.93□□□□□ -1.94
CHD3-217ENST00000574022 PLEKHG4Q58EX7 1191 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 CCDC181Q5TID7 509 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 LRP10Q7Z4F1 713 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 C1orf127Q8N9H9 656 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 HNRNPLLQ8WVV9 542 aaKnown RBP2.93□□□□□ -1.94
CHD3-217ENST00000574022 ANAPC16Q96DE5 110 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 MRGPRX2Q96LB1 330 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 DEPDC7Q96QD5 511 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 NT5C1AQ9BXI3 368 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 GRIP2Q9C0E4 1043 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 EHD4Q9H223 541 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 TMX1Q9H3N1 280 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 PCDH12Q9NPG4 1184 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 SNTG2Q9NY99 539 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 ZDHHC3Q9NYG2 299 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 CNTN3Q9P232 1028 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 TRAK1Q9UPV9 953 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 GPC6Q9Y625 555 aaPredicted RBP2.93□□□□□ -1.94
CHD3-217ENST00000574022 KCNMB2Q9Y691 235 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 WASF2Q9Y6W5 498 aa2.93□□□□□ -1.94
CHD3-217ENST00000574022 FAM221BA6H8Z2 402 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 CCDC85CA6NKD9 419 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 WNT7AO00755 349 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 XYLBO75191 536 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 CDC45O75419 566 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 ALDH1A1P00352 501 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 EPB42P16452 691 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 GPC1P35052 558 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 FCGRTP55899 365 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 MAP3K11Q16584 847 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 C4orf17Q53FE4 359 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms