RNA–Protein interactions for RNA: ENST00000573377.1

ITGB3-203, Transcript of integrin subunit beta 3, humanhuman

TSL 1 (best)

Gene ITGB3, Length 408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3-203ENST00000573377 LRRC37AA6NMS7 1700 aa17.22■□□□□ 0.35
ITGB3-203ENST00000573377 CAPN15O75808 1086 aa17.22■□□□□ 0.35
ITGB3-203ENST00000573377 CXCL9Q07325 125 aa17.22■□□□□ 0.35
ITGB3-203ENST00000573377 AIMP1Q12904 312 aaKnown RBP17.22■□□□□ 0.35
ITGB3-203ENST00000573377 TNIP1Q15025 636 aa17.22■□□□□ 0.35
ITGB3-203ENST00000573377 TCERG1O14776 1098 aaKnown RBP17.21■□□□□ 0.35
ITGB3-203ENST00000573377 WDR43Q15061 677 aaKnown RBP eCLIP17.21■□□□□ 0.35
ITGB3-203ENST00000573377 CIAPIN1Q6FI81 312 aa17.21■□□□□ 0.35
ITGB3-203ENST00000573377 HHIPL1Q96JK4 782 aa17.21■□□□□ 0.35
ITGB3-203ENST00000573377 TRIM35Q9UPQ4 493 aa17.21■□□□□ 0.35
ITGB3-203ENST00000573377 HCLS1P14317 486 aaPredicted RBP17.2■□□□□ 0.34
ITGB3-203ENST00000573377 TRIM28Q13263 835 aaKnown RBP17.2■□□□□ 0.34
ITGB3-203ENST00000573377 SF3B3Q15393 1217 aaKnown RBP17.2■□□□□ 0.34
ITGB3-203ENST00000573377 HDGFL1Q5TGJ6 251 aa17.2■□□□□ 0.34
ITGB3-203ENST00000573377 ANKRD13DQ6ZTN6 518 aa17.2■□□□□ 0.34
ITGB3-203ENST00000573377 CFAP44Q96MT7 982 aa17.2■□□□□ 0.34
ITGB3-203ENST00000573377 ISCA1Q9BUE6 129 aa17.2■□□□□ 0.34
ITGB3-203ENST00000573377 HYPKQ9NX55 129 aa17.2■□□□□ 0.34
ITGB3-203ENST00000573377 TLL2Q9Y6L7 1015 aa17.2■□□□□ 0.34
ITGB3-203ENST00000573377 HSP90B1P14625 803 aaKnown RBP17.19■□□□□ 0.34
ITGB3-203ENST00000573377 NECTIN2Q92692 538 aa17.19■□□□□ 0.34
ITGB3-203ENST00000573377 CHPF2Q9P2E5 772 aa17.19■□□□□ 0.34
ITGB3-203ENST00000573377 DDX60Q8IY21 1712 aaKnown RBP17.18■□□□□ 0.34
ITGB3-203ENST00000573377 MAP2K2P36507 400 aa17.18■□□□□ 0.34
ITGB3-203ENST00000573377 GMPSP49915 693 aaPredicted RBP17.18■□□□□ 0.34
ITGB3-203ENST00000573377 NEUROD2Q15784 382 aa17.18■□□□□ 0.34
ITGB3-203ENST00000573377 CST9Q5W186 159 aa17.18■□□□□ 0.34
ITGB3-203ENST00000573377 CAPNS2Q96L46 248 aa17.18■□□□□ 0.34
ITGB3-203ENST00000573377 HSPA8P11142 646 aaKnown RBP17.17■□□□□ 0.34
ITGB3-203ENST00000573377 LBX1P52954 281 aa17.17■□□□□ 0.34
ITGB3-203ENST00000573377 SLC51AQ86UW1 340 aa17.17■□□□□ 0.34
ITGB3-203ENST00000573377 CCDC146Q8IYE0 955 aa17.17■□□□□ 0.34
ITGB3-203ENST00000573377 DPF2Q92785 391 aa17.17■□□□□ 0.34
ITGB3-203ENST00000573377 BEGAINQ9BUH8 593 aa17.17■□□□□ 0.34
ITGB3-203ENST00000573377 CHMP4AQ9BY43 222 aa17.17■□□□□ 0.34
ITGB3-203ENST00000573377 DUOX1Q9NRD9 1551 aa17.17■□□□□ 0.34
ITGB3-203ENST00000573377 CALD1Q05682 793 aaKnown RBP17.16■□□□□ 0.34
ITGB3-203ENST00000573377 KRT24Q2M2I5 525 aa17.16■□□□□ 0.34
ITGB3-203ENST00000573377 CDC37L1Q7L3B6 337 aa17.16■□□□□ 0.34
ITGB3-203ENST00000573377 GPR101Q96P66 508 aaPredicted RBP17.16■□□□□ 0.34
ITGB3-203ENST00000573377 BCL2L13Q9BXK5 485 aa17.16■□□□□ 0.34
ITGB3-203ENST00000573377 LAS1LQ9Y4W2 734 aaKnown RBP17.16■□□□□ 0.34
ITGB3-203ENST00000573377 H7C1D1 291 aa17.15■□□□□ 0.34
ITGB3-203ENST00000573377 CA12O43570 354 aa17.15■□□□□ 0.34
ITGB3-203ENST00000573377 DDX10Q13206 875 aaKnown RBP17.15■□□□□ 0.34
ITGB3-203ENST00000573377 DUSP27Q5VZP5 1158 aa17.15■□□□□ 0.34
ITGB3-203ENST00000573377 SAPCD2Q86UD0 394 aa17.15■□□□□ 0.34
ITGB3-203ENST00000573377 ADAMTS8Q9UP79 889 aa17.15■□□□□ 0.34
ITGB3-203ENST00000573377 TRAF5O00463 557 aa17.14■□□□□ 0.33
ITGB3-203ENST00000573377 RAD17O75943 681 aa17.14■□□□□ 0.33
ITGB3-203ENST00000573377 ZNF853P0CG23 659 aa17.14■□□□□ 0.33
ITGB3-203ENST00000573377 RPS12P25398 132 aaKnown RBP17.14■□□□□ 0.33
ITGB3-203ENST00000573377 WASHC4Q2M389 1173 aa17.14■□□□□ 0.33
ITGB3-203ENST00000573377 EYA3Q99504 573 aa17.14■□□□□ 0.33
ITGB3-203ENST00000573377 CNOT7Q9UIV1 285 aaKnown RBP17.14■□□□□ 0.33
ITGB3-203ENST00000573377 YDJCA8MPS7 323 aa17.13■□□□□ 0.33
ITGB3-203ENST00000573377 CYP4F22Q6NT55 531 aa17.13■□□□□ 0.33
ITGB3-203ENST00000573377 FAM89AQ96GI7 184 aa17.13■□□□□ 0.33
ITGB3-203ENST00000573377 IFT57Q9NWB7 429 aa17.13■□□□□ 0.33
ITGB3-203ENST00000573377 TAF1P21675 1872 aa17.13■□□□□ 0.33
ITGB3-203ENST00000573377 CELF2O95319 508 aaKnown RBP17.12■□□□□ 0.33
ITGB3-203ENST00000573377 GNAI1P63096 354 aa17.12■□□□□ 0.33
ITGB3-203ENST00000573377 FMR1Q06787 632 aaKnown RBP eCLIP17.12■□□□□ 0.33
ITGB3-203ENST00000573377 GOLGA2Q08379 1002 aa17.12■□□□□ 0.33
ITGB3-203ENST00000573377 PAXIP1Q6ZW49 1069 aaPredicted RBP17.12■□□□□ 0.33
ITGB3-203ENST00000573377 ZBTB38Q8NAP3 1195 aaPredicted RBP17.12■□□□□ 0.33
ITGB3-203ENST00000573377 CELF1Q92879 486 aaKnown RBP17.12■□□□□ 0.33
ITGB3-203ENST00000573377 MBIPQ9NS73 344 aa17.12■□□□□ 0.33
ITGB3-203ENST00000573377 PODXL2Q9NZ53 605 aa17.12■□□□□ 0.33
ITGB3-203ENST00000573377 NSFL1CQ9UNZ2 370 aaKnown RBP17.12■□□□□ 0.33
ITGB3-203ENST00000573377 ATP5J2-PTCD1G3V325 749 aa17.11■□□□□ 0.33
ITGB3-203ENST00000573377 IRS4O14654 1257 aaPredicted RBP17.11■□□□□ 0.33
ITGB3-203ENST00000573377 HIRAP54198 1017 aaPredicted RBP17.11■□□□□ 0.33
ITGB3-203ENST00000573377 RPS8P62241 208 aaKnown RBP17.11■□□□□ 0.33
ITGB3-203ENST00000573377 GLIS2Q9BZE0 524 aaPredicted RBP17.11■□□□□ 0.33
ITGB3-203ENST00000573377 BRPF1P55201 1214 aaPredicted RBP17.1■□□□□ 0.33
ITGB3-203ENST00000573377 RIC3Q7Z5B4 369 aa17.1■□□□□ 0.33
ITGB3-203ENST00000573377 MICALL2Q8IY33 904 aa17.1■□□□□ 0.33
ITGB3-203ENST00000573377 CCDC191Q8NCU4 936 aa17.1■□□□□ 0.33
ITGB3-203ENST00000573377 PRKRIP1Q9H875 184 aaPredicted RBP17.1■□□□□ 0.33
ITGB3-203ENST00000573377 ZNF609O15014 1411 aa17.1■□□□□ 0.33
ITGB3-203ENST00000573377 C6orf229H3BNL8 230 aa17.09■□□□□ 0.33
ITGB3-203ENST00000573377 TRPM4Q8TD43 1214 aa17.09■□□□□ 0.33
ITGB3-203ENST00000573377 POLLQ9UGP5 575 aa17.09■□□□□ 0.33
ITGB3-203ENST00000573377 PSMD14O00487 310 aa17.08■□□□□ 0.32
ITGB3-203ENST00000573377 PCCAP05165 728 aaPredicted RBP17.08■□□□□ 0.32
ITGB3-203ENST00000573377 GPSM2P81274 684 aa17.08■□□□□ 0.32
ITGB3-203ENST00000573377 NOGQ13253 232 aa17.08■□□□□ 0.32
ITGB3-203ENST00000573377 TBC1D16Q8TBP0 767 aa17.08■□□□□ 0.32
ITGB3-203ENST00000573377 ABHD8Q96I13 439 aa17.08■□□□□ 0.32
ITGB3-203ENST00000573377 DBNDD1Q9H9R9 158 aa17.08■□□□□ 0.32
ITGB3-203ENST00000573377 ECE2O60344 883 aa17.07■□□□□ 0.32
ITGB3-203ENST00000573377 DDX58O95786 925 aaKnown RBP17.07■□□□□ 0.32
ITGB3-203ENST00000573377 CCDC152Q4G0S7 254 aa17.07■□□□□ 0.32
ITGB3-203ENST00000573377 ZC3H12CQ9C0D7 883 aaKnown RBP17.07■□□□□ 0.32
ITGB3-203ENST00000573377 PDE8AO60658 829 aa17.06■□□□□ 0.32
ITGB3-203ENST00000573377 VIL1P09327 827 aaKnown RBP17.06■□□□□ 0.32
ITGB3-203ENST00000573377 ZBTB12Q9Y330 459 aaPredicted RBP17.06■□□□□ 0.32
ITGB3-203ENST00000573377 APAF1O14727 1248 aa17.05■□□□□ 0.32
ITGB3-203ENST00000573377 RIMBP2O15034 1052 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms