RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
LINC01996-201ENST00000573270 FAM161AQ3B820 660 aa16.91■□□□□ 0.3
LINC01996-201ENST00000573270 CEP85Q6P2H3 762 aa16.91■□□□□ 0.3
LINC01996-201ENST00000573270 CHMP3Q9Y3E7 222 aa16.91■□□□□ 0.3
LINC01996-201ENST00000573270 RABL6Q3YEC7 729 aaPredicted RBP16.9■□□□□ 0.3
LINC01996-201ENST00000573270 SLC10A5Q5PT55 438 aa16.9■□□□□ 0.3
LINC01996-201ENST00000573270 LMBR1LQ6UX01 489 aa16.9■□□□□ 0.3
LINC01996-201ENST00000573270 KLHL34Q8N239 644 aa16.89■□□□□ 0.29
LINC01996-201ENST00000573270 HDAC5Q9UQL6 1122 aa16.89■□□□□ 0.29
LINC01996-201ENST00000573270 RTL9Q8NET4 1388 aa16.89■□□□□ 0.29
LINC01996-201ENST00000573270 PNMA6EA0A0J9YXQ4 647 aa16.88■□□□□ 0.29
LINC01996-201ENST00000573270 HSP90B1P14625 803 aaKnown RBP16.88■□□□□ 0.29
LINC01996-201ENST00000573270 TTLL11Q8NHH1 800 aa16.88■□□□□ 0.29
LINC01996-201ENST00000573270 NLRP3Q96P20 1036 aa16.88■□□□□ 0.29
LINC01996-201ENST00000573270 BRIP1Q9BX63 1249 aa16.88■□□□□ 0.29
LINC01996-201ENST00000573270 GREM2Q9H772 168 aa16.88■□□□□ 0.29
LINC01996-201ENST00000573270 PCDHB15Q9Y5E8 787 aa16.88■□□□□ 0.29
LINC01996-201ENST00000573270 MTX1Q13505 466 aa16.87■□□□□ 0.29
LINC01996-201ENST00000573270 CRY2Q49AN0 593 aa16.87■□□□□ 0.29
LINC01996-201ENST00000573270 CCDC152Q4G0S7 254 aa16.87■□□□□ 0.29
LINC01996-201ENST00000573270 GTF3C3Q9Y5Q9 886 aa16.87■□□□□ 0.29
LINC01996-201ENST00000573270 SRGAP3O43295 1099 aa16.86■□□□□ 0.29
LINC01996-201ENST00000573270 CSF1RP07333 972 aa16.86■□□□□ 0.29
LINC01996-201ENST00000573270 PDE6BP35913 854 aa16.86■□□□□ 0.29
LINC01996-201ENST00000573270 AAMPQ13685 434 aa16.86■□□□□ 0.29
LINC01996-201ENST00000573270 C2CD5Q86YS7 1000 aa16.86■□□□□ 0.29
LINC01996-201ENST00000573270 SIRT2Q8IXJ6 389 aa16.86■□□□□ 0.29
LINC01996-201ENST00000573270 SEC31BQ9NQW1 1179 aa16.86■□□□□ 0.29
LINC01996-201ENST00000573270 PPP1R1BQ9UD71 204 aaPredicted RBP16.86■□□□□ 0.29
LINC01996-201ENST00000573270 SLX4Q8IY92 1834 aa16.85■□□□□ 0.29
LINC01996-201ENST00000573270 ITGA6P23229 1130 aa16.85■□□□□ 0.29
LINC01996-201ENST00000573270 CHRNA5P30532 468 aa16.85■□□□□ 0.29
LINC01996-201ENST00000573270 SF3B3Q15393 1217 aaKnown RBP16.85■□□□□ 0.29
LINC01996-201ENST00000573270 RPGRQ92834 1020 aaKnown RBP16.85■□□□□ 0.29
LINC01996-201ENST00000573270 LTBP1Q14766 1721 aa16.84■□□□□ 0.29
LINC01996-201ENST00000573270 KLRG2A4D1S0 409 aaPredicted RBP16.84■□□□□ 0.29
LINC01996-201ENST00000573270 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
LINC01996-201ENST00000573270 ARAP2Q8WZ64 1704 aa16.84■□□□□ 0.29
LINC01996-201ENST00000573270 ANKRD18BA2A2Z9 1011 aa16.83■□□□□ 0.28
LINC01996-201ENST00000573270 SRGNP10124 158 aa16.83■□□□□ 0.28
LINC01996-201ENST00000573270 RFX5P48382 616 aaPredicted RBP16.83■□□□□ 0.28
LINC01996-201ENST00000573270 ATP8B2P98198 1209 aa16.83■□□□□ 0.28
LINC01996-201ENST00000573270 IFIT5Q13325 482 aaKnown RBP16.83■□□□□ 0.28
LINC01996-201ENST00000573270 POLA2Q14181 598 aa16.83■□□□□ 0.28
LINC01996-201ENST00000573270 CCDC57Q2TAC2 916 aa16.83■□□□□ 0.28
LINC01996-201ENST00000573270 ERICH6BQ5W0A0 696 aa16.83■□□□□ 0.28
LINC01996-201ENST00000573270 SLC51AQ86UW1 340 aa16.83■□□□□ 0.28
LINC01996-201ENST00000573270 RPAP2Q8IXW5 612 aaPredicted RBP16.83■□□□□ 0.28
LINC01996-201ENST00000573270 PELP1Q8IZL8 1130 aaKnown RBP16.83■□□□□ 0.28
LINC01996-201ENST00000573270 ZNF594Q96JF6 807 aaPredicted RBP16.83■□□□□ 0.28
LINC01996-201ENST00000573270 PA2G4Q9UQ80 394 aaKnown RBP16.83■□□□□ 0.28
LINC01996-201ENST00000573270 ARFGEF1Q9Y6D6 1849 aa16.82■□□□□ 0.28
LINC01996-201ENST00000573270 NPR1P16066 1061 aa16.82■□□□□ 0.28
LINC01996-201ENST00000573270 TAF7LQ5H9L4 462 aa16.82■□□□□ 0.28
LINC01996-201ENST00000573270 DDX46Q7L014 1031 aaKnown RBP16.82■□□□□ 0.28
LINC01996-201ENST00000573270 NLGN2Q8NFZ4 835 aa16.82■□□□□ 0.28
LINC01996-201ENST00000573270 SSH3Q8TE77 659 aa16.82■□□□□ 0.28
LINC01996-201ENST00000573270 CELF1Q92879 486 aaKnown RBP16.82■□□□□ 0.28
LINC01996-201ENST00000573270 HMMRO75330 724 aa16.81■□□□□ 0.28
LINC01996-201ENST00000573270 DPEP1P16444 411 aa16.81■□□□□ 0.28
LINC01996-201ENST00000573270 GRAPQ13588 217 aa16.81■□□□□ 0.28
LINC01996-201ENST00000573270 GRAPLQ8TC17 118 aaPredicted RBP16.81■□□□□ 0.28
LINC01996-201ENST00000573270 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.28
LINC01996-201ENST00000573270 RBM17Q96I25 401 aaKnown RBP16.81■□□□□ 0.28
LINC01996-201ENST00000573270 SIL1Q9H173 461 aa16.81■□□□□ 0.28
LINC01996-201ENST00000573270 DUOX1Q9NRD9 1551 aa16.81■□□□□ 0.28
LINC01996-201ENST00000573270 H0YIN7 160 aa16.8■□□□□ 0.28
LINC01996-201ENST00000573270 PTPN12Q05209 780 aaKnown RBP16.8■□□□□ 0.28
LINC01996-201ENST00000573270 STYK1Q6J9G0 422 aa16.8■□□□□ 0.28
LINC01996-201ENST00000573270 MASTLQ96GX5 879 aa16.8■□□□□ 0.28
LINC01996-201ENST00000573270 CDC5LQ99459 802 aaKnown RBP16.8■□□□□ 0.28
LINC01996-201ENST00000573270 FHDC1Q9C0D6 1143 aaPredicted RBP16.8■□□□□ 0.28
LINC01996-201ENST00000573270 WWC3Q9ULE0 1092 aa16.8■□□□□ 0.28
LINC01996-201ENST00000573270 CD2APQ9Y5K6 639 aa16.8■□□□□ 0.28
LINC01996-201ENST00000573270 A0A0G2JLW4 131 aa16.79■□□□□ 0.28
LINC01996-201ENST00000573270 HOXA10P31260 410 aaPredicted RBP16.79■□□□□ 0.28
LINC01996-201ENST00000573270 HDAC1Q13547 482 aaPredicted RBP16.79■□□□□ 0.28
LINC01996-201ENST00000573270 ANKRD18AQ8IVF6 992 aa16.79■□□□□ 0.28
LINC01996-201ENST00000573270 EXOC6BQ9Y2D4 811 aa16.79■□□□□ 0.28
LINC01996-201ENST00000573270 PPEF1O14829 653 aaPredicted RBP16.78■□□□□ 0.28
LINC01996-201ENST00000573270 IGHDP01880 384 aa16.78■□□□□ 0.28
LINC01996-201ENST00000573270 IGHMBP2P38935 993 aaKnown RBP16.78■□□□□ 0.28
LINC01996-201ENST00000573270 TGFB2P61812 414 aa16.78■□□□□ 0.28
LINC01996-201ENST00000573270 PRPF40BQ6NWY9 871 aaKnown RBP16.78■□□□□ 0.28
LINC01996-201ENST00000573270 CRAMP1Q96RY5 1269 aa16.78■□□□□ 0.28
LINC01996-201ENST00000573270 PUS3Q9BZE2 481 aaKnown RBP16.78■□□□□ 0.28
LINC01996-201ENST00000573270 PDZRN3Q9UPQ7 1066 aa16.78■□□□□ 0.28
LINC01996-201ENST00000573270 LRRC24Q50LG9 513 aa16.77■□□□□ 0.28
LINC01996-201ENST00000573270 B4GALNT3Q6L9W6 998 aa16.77■□□□□ 0.28
LINC01996-201ENST00000573270 COPRSQ9NQ92 184 aa16.77■□□□□ 0.28
LINC01996-201ENST00000573270 ZNF609O15014 1411 aa16.77■□□□□ 0.27
LINC01996-201ENST00000573270 APBB1O00213 710 aa16.76■□□□□ 0.27
LINC01996-201ENST00000573270 SURF6O75683 361 aaKnown RBP16.76■□□□□ 0.27
LINC01996-201ENST00000573270 KCNA3P22001 575 aa16.76■□□□□ 0.27
LINC01996-201ENST00000573270 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
LINC01996-201ENST00000573270 CCDC136Q96JN2 1154 aa16.76■□□□□ 0.27
LINC01996-201ENST00000573270 MPHOSPH8Q99549 860 aa16.76■□□□□ 0.27
LINC01996-201ENST00000573270 CNNM1Q9NRU3 951 aa16.76■□□□□ 0.27
LINC01996-201ENST00000573270 PPP4R2Q9NY27 417 aa16.76■□□□□ 0.27
LINC01996-201ENST00000573270 EYA2O00167 538 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms