RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 NLRP3Q96P20 1036 aa17.52■□□□□ 0.4
CCDC40-208ENST00000572270 MKI67P46013 3256 aaKnown RBP17.52■□□□□ 0.39
CCDC40-208ENST00000572270 RASAL3Q86YV0 1011 aa17.51■□□□□ 0.39
CCDC40-208ENST00000572270 NGEFQ8N5V2 710 aa17.51■□□□□ 0.39
CCDC40-208ENST00000572270 DPF2Q92785 391 aa17.51■□□□□ 0.39
CCDC40-208ENST00000572270 MAP3K15Q6ZN16 1313 aa17.5■□□□□ 0.39
CCDC40-208ENST00000572270 SULF1Q8IWU6 871 aa17.5■□□□□ 0.39
CCDC40-208ENST00000572270 ZBTB12Q9Y330 459 aaPredicted RBP17.5■□□□□ 0.39
CCDC40-208ENST00000572270 ABCC4O15439 1325 aa17.49■□□□□ 0.39
CCDC40-208ENST00000572270 UBN2Q6ZU65 1347 aa17.49■□□□□ 0.39
CCDC40-208ENST00000572270 YDJCA8MPS7 323 aa17.49■□□□□ 0.39
CCDC40-208ENST00000572270 TBC1D8O95759 1140 aa17.49■□□□□ 0.39
CCDC40-208ENST00000572270 SUSD4Q5VX71 490 aa17.49■□□□□ 0.39
CCDC40-208ENST00000572270 PPP1R42Q7Z4L9 355 aa17.49■□□□□ 0.39
CCDC40-208ENST00000572270 NTSR2O95665 410 aa17.48■□□□□ 0.39
CCDC40-208ENST00000572270 RBM26Q5T8P6 1007 aaKnown RBP17.48■□□□□ 0.39
CCDC40-208ENST00000572270 C3orf67Q6ZVT6 689 aa17.48■□□□□ 0.39
CCDC40-208ENST00000572270 SP8Q8IXZ3 490 aa17.48■□□□□ 0.39
CCDC40-208ENST00000572270 GPR25O00155 361 aa17.47■□□□□ 0.39
CCDC40-208ENST00000572270 PSMD14O00487 310 aa17.47■□□□□ 0.39
CCDC40-208ENST00000572270 BBOX1O75936 387 aa17.47■□□□□ 0.39
CCDC40-208ENST00000572270 AMER1Q5JTC6 1135 aaPredicted RBP17.47■□□□□ 0.39
CCDC40-208ENST00000572270 RTF1Q92541 710 aaKnown RBP17.47■□□□□ 0.39
CCDC40-208ENST00000572270 PAPPA2Q9BXP8 1791 aa17.46■□□□□ 0.39
CCDC40-208ENST00000572270 EGFRP00533 1210 aa17.46■□□□□ 0.39
CCDC40-208ENST00000572270 RPS12P25398 132 aaKnown RBP17.46■□□□□ 0.39
CCDC40-208ENST00000572270 KIF4BQ2VIQ3 1234 aa17.46■□□□□ 0.39
CCDC40-208ENST00000572270 NOM1Q5C9Z4 860 aaKnown RBP17.46■□□□□ 0.39
CCDC40-208ENST00000572270 CDCA5Q96FF9 252 aa17.46■□□□□ 0.39
CCDC40-208ENST00000572270 GGA3Q9NZ52 723 aa17.46■□□□□ 0.39
CCDC40-208ENST00000572270 INTS3Q68E01 1043 aaKnown RBP17.45■□□□□ 0.38
CCDC40-208ENST00000572270 ZBTB3Q9H5J0 574 aa17.45■□□□□ 0.38
CCDC40-208ENST00000572270 FKTNO75072 461 aa17.44■□□□□ 0.38
CCDC40-208ENST00000572270 FKBP1BP68106 108 aa17.44■□□□□ 0.38
CCDC40-208ENST00000572270 PARP10Q53GL7 1025 aa17.44■□□□□ 0.38
CCDC40-208ENST00000572270 TTLL7Q6ZT98 887 aa17.44■□□□□ 0.38
CCDC40-208ENST00000572270 DDX60Q8IY21 1712 aaKnown RBP17.44■□□□□ 0.38
CCDC40-208ENST00000572270 COL3A1P02461 1466 aaPredicted RBP17.44■□□□□ 0.38
CCDC40-208ENST00000572270 ANKRD36CQ5JPF3 1778 aa17.43■□□□□ 0.38
CCDC40-208ENST00000572270 DLL1O00548 723 aa17.43■□□□□ 0.38
CCDC40-208ENST00000572270 EIF4G2P78344 907 aaKnown RBP eCLIP17.43■□□□□ 0.38
CCDC40-208ENST00000572270 MCM10Q7L590 875 aa17.43■□□□□ 0.38
CCDC40-208ENST00000572270 ZNF34Q8IZ26 560 aa17.43■□□□□ 0.38
CCDC40-208ENST00000572270 RRP7AQ9Y3A4 280 aaKnown RBP17.43■□□□□ 0.38
CCDC40-208ENST00000572270 LAMB2P55268 1798 aa17.43■□□□□ 0.38
CCDC40-208ENST00000572270 RBBP6Q7Z6E9 1792 aaKnown RBP17.43■□□□□ 0.38
CCDC40-208ENST00000572270 DUOX1Q9NRD9 1551 aa17.42■□□□□ 0.38
CCDC40-208ENST00000572270 POTEFA5A3E0 1075 aa17.42■□□□□ 0.38
CCDC40-208ENST00000572270 WASHC4Q2M389 1173 aa17.42■□□□□ 0.38
CCDC40-208ENST00000572270 DDX46Q7L014 1031 aaKnown RBP17.42■□□□□ 0.38
CCDC40-208ENST00000572270 DBNDD1Q9H9R9 158 aa17.42■□□□□ 0.38
CCDC40-208ENST00000572270 MYL6BP14649 208 aa17.41■□□□□ 0.38
CCDC40-208ENST00000572270 PRKAR2BP31323 418 aa17.41■□□□□ 0.38
CCDC40-208ENST00000572270 GIGYF2Q6Y7W6 1299 aaKnown RBP17.41■□□□□ 0.38
CCDC40-208ENST00000572270 PHACTR3Q96KR7 559 aa17.41■□□□□ 0.38
CCDC40-208ENST00000572270 UTP14AQ9BVJ6 771 aaKnown RBP17.41■□□□□ 0.38
CCDC40-208ENST00000572270 TM4SF4P48230 202 aa17.4■□□□□ 0.38
CCDC40-208ENST00000572270 SREBF2Q12772 1141 aa17.4■□□□□ 0.38
CCDC40-208ENST00000572270 GRAPQ13588 217 aa17.4■□□□□ 0.38
CCDC40-208ENST00000572270 SLC10A5Q5PT55 438 aa17.4■□□□□ 0.38
CCDC40-208ENST00000572270 TMC4Q7Z404 712 aa17.4■□□□□ 0.38
CCDC40-208ENST00000572270 GRAPLQ8TC17 118 aaPredicted RBP17.4■□□□□ 0.38
CCDC40-208ENST00000572270 COLQQ9Y215 455 aaPredicted RBP17.4■□□□□ 0.38
CCDC40-208ENST00000572270 LRRC37AA6NMS7 1700 aa17.39■□□□□ 0.37
CCDC40-208ENST00000572270 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
CCDC40-208ENST00000572270 HTTP42858 3142 aa17.39■□□□□ 0.37
CCDC40-208ENST00000572270 RIMBP2O15034 1052 aa17.38■□□□□ 0.37
CCDC40-208ENST00000572270 ECE2O60344 883 aa17.38■□□□□ 0.37
CCDC40-208ENST00000572270 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
CCDC40-208ENST00000572270 ANGEL2Q5VTE6 544 aaKnown RBP17.38■□□□□ 0.37
CCDC40-208ENST00000572270 TRIM17Q9Y577 477 aa17.38■□□□□ 0.37
CCDC40-208ENST00000572270 CENPFP49454 3210 aa17.38■□□□□ 0.37
CCDC40-208ENST00000572270 ASTN2O75129 1339 aaPredicted RBP17.38■□□□□ 0.37
CCDC40-208ENST00000572270 TAF7Q15545 349 aaPredicted RBP17.37■□□□□ 0.37
CCDC40-208ENST00000572270 SLC17A8Q8NDX2 589 aa17.37■□□□□ 0.37
CCDC40-208ENST00000572270 CFHR5Q9BXR6 569 aa17.37■□□□□ 0.37
CCDC40-208ENST00000572270 RSPH6AQ9H0K4 717 aa17.37■□□□□ 0.37
CCDC40-208ENST00000572270 TAF1P21675 1872 aa17.36■□□□□ 0.37
CCDC40-208ENST00000572270 C6orf229H3BNL8 230 aa17.36■□□□□ 0.37
CCDC40-208ENST00000572270 MKRN3Q13064 507 aaKnown RBP17.36■□□□□ 0.37
CCDC40-208ENST00000572270 TTLL12Q14166 644 aaPredicted RBP17.36■□□□□ 0.37
CCDC40-208ENST00000572270 DCTN1Q14203 1278 aa17.36■□□□□ 0.37
CCDC40-208ENST00000572270 EYA3Q99504 573 aa17.36■□□□□ 0.37
CCDC40-208ENST00000572270 TIMELESSQ9UNS1 1208 aa17.36■□□□□ 0.37
CCDC40-208ENST00000572270 NSFL1CQ9UNZ2 370 aaKnown RBP17.36■□□□□ 0.37
CCDC40-208ENST00000572270 RTL9Q8NET4 1388 aa17.36■□□□□ 0.37
CCDC40-208ENST00000572270 UBE2Q2LH0YL09 131 aa17.35■□□□□ 0.37
CCDC40-208ENST00000572270 HCLS1P14317 486 aaPredicted RBP17.35■□□□□ 0.37
CCDC40-208ENST00000572270 SCARF1Q14162 830 aa17.35■□□□□ 0.37
CCDC40-208ENST00000572270 MOB2Q70IA6 237 aa17.35■□□□□ 0.37
CCDC40-208ENST00000572270 BRCA2P51587 3418 aa17.35■□□□□ 0.37
CCDC40-208ENST00000572270 ALDH1A1P00352 501 aa17.34■□□□□ 0.37
CCDC40-208ENST00000572270 DOK7Q18PE1 504 aa17.34■□□□□ 0.37
CCDC40-208ENST00000572270 KDM3BQ7LBC6 1761 aa17.34■□□□□ 0.37
CCDC40-208ENST00000572270 OTOP1Q7RTM1 612 aa17.34■□□□□ 0.37
CCDC40-208ENST00000572270 PITPNM2Q9BZ72 1349 aa17.34■□□□□ 0.37
CCDC40-208ENST00000572270 KCNQ5Q9NR82 932 aa17.34■□□□□ 0.37
CCDC40-208ENST00000572270 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
CCDC40-208ENST00000572270 SZT2Q5T011 3432 aa17.34■□□□□ 0.37
CCDC40-208ENST00000572270 G3V3G9 751 aa17.33■□□□□ 0.36
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