RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 GMCL1Q96IK5 515 aa6.97□□□□□ -1.29
NPLOC4-205ENST00000571562 CSRNP1Q96S65 589 aa6.97□□□□□ -1.29
NPLOC4-205ENST00000571562 CFHR5Q9BXR6 569 aa6.97□□□□□ -1.29
NPLOC4-205ENST00000571562 GSX2Q9BZM3 304 aa6.97□□□□□ -1.29
NPLOC4-205ENST00000571562 ABI2Q9NYB9 513 aaPredicted RBP6.97□□□□□ -1.29
NPLOC4-205ENST00000571562 KANSL3Q9P2N6 904 aa6.97□□□□□ -1.29
NPLOC4-205ENST00000571562 CYP2E1P05181 493 aaPredicted RBP6.96□□□□□ -1.3
NPLOC4-205ENST00000571562 RARAP10276 462 aa6.96□□□□□ -1.3
NPLOC4-205ENST00000571562 CTBSQ01459 385 aa6.96□□□□□ -1.3
NPLOC4-205ENST00000571562 LAMC2Q13753 1193 aa6.96□□□□□ -1.3
NPLOC4-205ENST00000571562 CCINQ13939 588 aa6.96□□□□□ -1.3
NPLOC4-205ENST00000571562 GAS6Q14393 721 aa6.96□□□□□ -1.3
NPLOC4-205ENST00000571562 NLRP13Q86W25 1043 aa6.96□□□□□ -1.3
NPLOC4-205ENST00000571562 BHMTQ93088 406 aa6.96□□□□□ -1.3
NPLOC4-205ENST00000571562 FAM161BQ96MY7 647 aa6.96□□□□□ -1.3
NPLOC4-205ENST00000571562 TRERF1Q96PN7 1200 aa6.96□□□□□ -1.3
NPLOC4-205ENST00000571562 CNTN3Q9P232 1028 aa6.96□□□□□ -1.3
NPLOC4-205ENST00000571562 NXF1Q9UBU9 619 aaKnown RBP6.96□□□□□ -1.3
NPLOC4-205ENST00000571562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.96□□□□□ -1.3
NPLOC4-205ENST00000571562 EREGO14944 169 aa6.95□□□□□ -1.3
NPLOC4-205ENST00000571562 MMP20O60882 483 aa6.95□□□□□ -1.3
NPLOC4-205ENST00000571562 CPNE3O75131 537 aaKnown RBP6.95□□□□□ -1.3
NPLOC4-205ENST00000571562 POLR3DP05423 398 aaPredicted RBP6.95□□□□□ -1.3
NPLOC4-205ENST00000571562 IRS1P35568 1242 aa6.95□□□□□ -1.3
NPLOC4-205ENST00000571562 ATP2B2Q01814 1243 aa6.95□□□□□ -1.3
NPLOC4-205ENST00000571562 XKR5Q6UX68 686 aa6.95□□□□□ -1.3
NPLOC4-205ENST00000571562 PI16Q6UXB8 463 aa6.95□□□□□ -1.3
NPLOC4-205ENST00000571562 SV2AQ7L0J3 742 aa6.95□□□□□ -1.3
NPLOC4-205ENST00000571562 C1orf127Q8N9H9 656 aa6.95□□□□□ -1.3
NPLOC4-205ENST00000571562 NANOS1Q8WY41 292 aaKnown RBP6.95□□□□□ -1.3
NPLOC4-205ENST00000571562 DUSP9Q99956 384 aaKnown RBP6.95□□□□□ -1.3
NPLOC4-205ENST00000571562 KIAA1522Q9P206 1035 aaPredicted RBP6.95□□□□□ -1.3
NPLOC4-205ENST00000571562 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.95□□□□□ -1.3
NPLOC4-205ENST00000571562 H3BM21 787 aa6.94□□□□□ -1.3
NPLOC4-205ENST00000571562 PRPF40AO75400 957 aaKnown RBP6.94□□□□□ -1.3
NPLOC4-205ENST00000571562 GPR161Q8N6U8 529 aaKnown RBP6.94□□□□□ -1.3
NPLOC4-205ENST00000571562 PNMA5Q96PV4 448 aa6.94□□□□□ -1.3
NPLOC4-205ENST00000571562 NPHS2Q9NP85 383 aa6.94□□□□□ -1.3
NPLOC4-205ENST00000571562 PHF24Q9UPV7 400 aa6.94□□□□□ -1.3
NPLOC4-205ENST00000571562 C2CD2LO14523 706 aa6.93□□□□□ -1.3
NPLOC4-205ENST00000571562 ZNF326Q5BKZ1 582 aaKnown RBP6.93□□□□□ -1.3
NPLOC4-205ENST00000571562 FAM182BQ5T319 152 aa6.93□□□□□ -1.3
NPLOC4-205ENST00000571562 FOXR1Q6PIV2 292 aa6.93□□□□□ -1.3
NPLOC4-205ENST00000571562 MRRFQ96E11 262 aaKnown RBP6.93□□□□□ -1.3
NPLOC4-205ENST00000571562 LATS2Q9NRM7 1088 aa6.93□□□□□ -1.3
NPLOC4-205ENST00000571562 ERBB4Q15303 1308 aa6.93□□□□□ -1.3
NPLOC4-205ENST00000571562 RNFT1Q5M7Z0 435 aa6.92□□□□□ -1.3
NPLOC4-205ENST00000571562 COL13A1Q5TAT6 717 aaPredicted RBP6.92□□□□□ -1.3
NPLOC4-205ENST00000571562 ZNF787Q6DD87 383 aa6.92□□□□□ -1.3
NPLOC4-205ENST00000571562 NSUN5Q96P11 429 aaKnown RBP6.92□□□□□ -1.3
NPLOC4-205ENST00000571562 DNAJC25Q9H1X3 360 aa6.92□□□□□ -1.3
NPLOC4-205ENST00000571562 ZFYVE28Q9HCC9 887 aa6.92□□□□□ -1.3
NPLOC4-205ENST00000571562 PARP2Q9UGN5 583 aa6.92□□□□□ -1.3
NPLOC4-205ENST00000571562 VSIG8P0DPA2 414 aa6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 BMP4P12644 408 aa6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 ACPPP15309 386 aa6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 MX2P20592 715 aa6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 PCBP4P57723 403 aaKnown RBP6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 MLLT1Q03111 559 aaPredicted RBP6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 TBC1D8BQ0IIM8 1120 aa6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 ZNF468Q5VIY5 522 aaPredicted RBP6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 TTC39BQ5VTQ0 682 aaPredicted RBP6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 OR13H1Q8NG92 308 aa6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 EPS8L3Q8TE67 593 aaKnown RBP6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 FBF1Q8TES7 1133 aa6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 CCDC74AQ96AQ1 378 aa6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 C11orf16Q9NQ32 467 aa6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 PRR12Q9ULL5 1215 aa6.91□□□□□ -1.3
NPLOC4-205ENST00000571562 PHF20L1A8MW92 1017 aa6.9□□□□□ -1.3
NPLOC4-205ENST00000571562 RECKO95980 971 aa6.9□□□□□ -1.3
NPLOC4-205ENST00000571562 NEFLP07196 543 aa6.9□□□□□ -1.3
NPLOC4-205ENST00000571562 CES1P23141 567 aa6.9□□□□□ -1.3
NPLOC4-205ENST00000571562 ALG1LQ6GMV1 187 aa6.9□□□□□ -1.3
NPLOC4-205ENST00000571562 DHX32Q7L7V1 743 aaKnown RBP6.9□□□□□ -1.3
NPLOC4-205ENST00000571562 SYT9Q86SS6 491 aa6.9□□□□□ -1.3
NPLOC4-205ENST00000571562 MAP3K6O95382 1288 aa6.89□□□□□ -1.31
NPLOC4-205ENST00000571562 PSAPP07602 524 aa6.89□□□□□ -1.31
NPLOC4-205ENST00000571562 KRT76Q01546 638 aa6.89□□□□□ -1.31
NPLOC4-205ENST00000571562 XPCQ01831 940 aaPredicted RBP6.89□□□□□ -1.31
NPLOC4-205ENST00000571562 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.89□□□□□ -1.31
NPLOC4-205ENST00000571562 GALNT12Q8IXK2 581 aa6.89□□□□□ -1.31
NPLOC4-205ENST00000571562 COL25A1Q9BXS0 654 aaPredicted RBP6.89□□□□□ -1.31
NPLOC4-205ENST00000571562 IGFLR1Q9H665 355 aa6.89□□□□□ -1.31
NPLOC4-205ENST00000571562 TLR7Q9NYK1 1049 aaKnown RBP6.89□□□□□ -1.31
NPLOC4-205ENST00000571562 E9PSI1 815 aa6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 TERTO14746 1132 aaKnown RBP6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 GNA15P30679 374 aa6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 SOX18P35713 384 aa6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 PLAURQ03405 335 aa6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 PSMD2Q13200 908 aa6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 MRPL58Q14197 206 aaKnown RBP6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 LCE2CQ5TA81 110 aa6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 NPAS3Q8IXF0 933 aa6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 CNTNAP3BQ96NU0 1288 aa6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 CNTNAP3Q9BZ76 1288 aa6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 UBE2OQ9C0C9 1292 aaKnown RBP6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 MBIPQ9NS73 344 aa6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 KLF15Q9UIH9 416 aa6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 NAGPAQ9UK23 515 aa6.88□□□□□ -1.31
NPLOC4-205ENST00000571562 TRPA1O75762 1119 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms