RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 ZNF587Q96SQ5 575 aaPredicted RBP8.34□□□□□ -1.08
KARSP3-201ENST00000571212 QTRT2Q9H974 415 aaKnown RBP8.34□□□□□ -1.08
KARSP3-201ENST00000571212 SHROOM2Q13796 1616 aa8.33□□□□□ -1.08
KARSP3-201ENST00000571212 BIVM-ERCC5R4GMW8 1640 aa8.33□□□□□ -1.08
KARSP3-201ENST00000571212 TGFBR3LH3BV60 316 aa8.33□□□□□ -1.08
KARSP3-201ENST00000571212 PIK3R2O00459 728 aa8.33□□□□□ -1.08
KARSP3-201ENST00000571212 CHRNA4P43681 627 aa8.33□□□□□ -1.08
KARSP3-201ENST00000571212 DGKZQ13574 1117 aa8.33□□□□□ -1.08
KARSP3-201ENST00000571212 COL9A3Q14050 684 aaPredicted RBP8.33□□□□□ -1.08
KARSP3-201ENST00000571212 CD163Q86VB7 1156 aa8.33□□□□□ -1.08
KARSP3-201ENST00000571212 PRIMPOLQ96LW4 560 aa8.33□□□□□ -1.08
KARSP3-201ENST00000571212 GSX2Q9BZM3 304 aa8.33□□□□□ -1.08
KARSP3-201ENST00000571212 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.32□□□□□ -1.08
KARSP3-201ENST00000571212 NEUROD1Q13562 356 aa8.32□□□□□ -1.08
KARSP3-201ENST00000571212 ALYREFQ86V81 257 aaKnown RBP8.32□□□□□ -1.08
KARSP3-201ENST00000571212 MICALL1Q8N3F8 863 aa8.32□□□□□ -1.08
KARSP3-201ENST00000571212 NOP53Q9NZM5 478 aaKnown RBP8.32□□□□□ -1.08
KARSP3-201ENST00000571212 ZMIZ1Q9ULJ6 1067 aa8.32□□□□□ -1.08
KARSP3-201ENST00000571212 FHAD1B1AJZ9 1412 aa8.32□□□□□ -1.08
KARSP3-201ENST00000571212 TOP2BQ02880 1626 aa8.32□□□□□ -1.08
KARSP3-201ENST00000571212 FAM229AH3BQW9 127 aa8.31□□□□□ -1.08
KARSP3-201ENST00000571212 IDH3AP50213 366 aa8.31□□□□□ -1.08
KARSP3-201ENST00000571212 HIF1AQ16665 826 aa8.31□□□□□ -1.08
KARSP3-201ENST00000571212 IER5Q5VY09 327 aa8.31□□□□□ -1.08
KARSP3-201ENST00000571212 LRFN2Q9ULH4 789 aa8.31□□□□□ -1.08
KARSP3-201ENST00000571212 ERICH3Q5RHP9 1530 aa8.3□□□□□ -1.08
KARSP3-201ENST00000571212 LOC100996750A0A140TA64 210 aa8.3□□□□□ -1.08
KARSP3-201ENST00000571212 FOXO3O43524 673 aa8.3□□□□□ -1.08
KARSP3-201ENST00000571212 PRMT3O60678 531 aa8.3□□□□□ -1.08
KARSP3-201ENST00000571212 FKBP5Q13451 457 aaPredicted RBP8.3□□□□□ -1.08
KARSP3-201ENST00000571212 STK32AQ8WU08 396 aa8.3□□□□□ -1.08
KARSP3-201ENST00000571212 VTI1AQ96AJ9 217 aa8.3□□□□□ -1.08
KARSP3-201ENST00000571212 KRTAP4-6Q9BYQ5 205 aa8.3□□□□□ -1.08
KARSP3-201ENST00000571212 UBE2OQ9C0C9 1292 aaKnown RBP8.3□□□□□ -1.08
KARSP3-201ENST00000571212 ZMYND15Q9H091 742 aa8.3□□□□□ -1.08
KARSP3-201ENST00000571212 USP20Q9Y2K6 914 aa8.3□□□□□ -1.08
KARSP3-201ENST00000571212 KIF13AQ9H1H9 1805 aa8.29□□□□□ -1.08
KARSP3-201ENST00000571212 INPP5BP32019 993 aa8.29□□□□□ -1.08
KARSP3-201ENST00000571212 BAG6P46379 1132 aa8.29□□□□□ -1.08
KARSP3-201ENST00000571212 SRPK2P78362 688 aaKnown RBP8.29□□□□□ -1.08
KARSP3-201ENST00000571212 C20orf204Q6ZNR8 217 aa8.29□□□□□ -1.08
KARSP3-201ENST00000571212 SUPT5HO00267 1087 aaKnown RBP8.29□□□□□ -1.08
KARSP3-201ENST00000571212 NFKB1P19838 968 aa8.29□□□□□ -1.08
KARSP3-201ENST00000571212 FAM69CQ0P6D2 419 aa8.29□□□□□ -1.08
KARSP3-201ENST00000571212 CCINQ13939 588 aa8.29□□□□□ -1.08
KARSP3-201ENST00000571212 KRT25Q7Z3Z0 450 aa8.29□□□□□ -1.08
KARSP3-201ENST00000571212 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.29□□□□□ -1.08
KARSP3-201ENST00000571212 ADAM23O75077 832 aa8.28□□□□□ -1.08
KARSP3-201ENST00000571212 MICAL2O94851 1124 aa8.28□□□□□ -1.08
KARSP3-201ENST00000571212 FURINP09958 794 aa8.28□□□□□ -1.08
KARSP3-201ENST00000571212 C11orf91Q3C1V1 193 aa8.28□□□□□ -1.08
KARSP3-201ENST00000571212 NUDT8Q8WV74 236 aa8.28□□□□□ -1.08
KARSP3-201ENST00000571212 DNAJB12Q9NXW2 375 aaKnown RBP8.28□□□□□ -1.08
KARSP3-201ENST00000571212 ARID3CA6NKF2 412 aa8.27□□□□□ -1.09
KARSP3-201ENST00000571212 NID1P14543 1247 aa8.27□□□□□ -1.09
KARSP3-201ENST00000571212 COX20Q5RI15 118 aa8.27□□□□□ -1.09
KARSP3-201ENST00000571212 CAPN12Q6ZSI9 719 aa8.27□□□□□ -1.09
KARSP3-201ENST00000571212 MYO19Q96H55 970 aa8.27□□□□□ -1.09
KARSP3-201ENST00000571212 PNMA5Q96PV4 448 aa8.27□□□□□ -1.09
KARSP3-201ENST00000571212 ZFATQ9P243 1243 aa8.27□□□□□ -1.09
KARSP3-201ENST00000571212 SLC6A14Q9UN76 642 aa8.27□□□□□ -1.09
KARSP3-201ENST00000571212 ACIN1Q9UKV3 1341 aaKnown RBP8.26□□□□□ -1.09
KARSP3-201ENST00000571212 OPLAHO14841 1288 aa8.26□□□□□ -1.09
KARSP3-201ENST00000571212 TARSP26639 723 aaKnown RBP8.26□□□□□ -1.09
KARSP3-201ENST00000571212 OCLNQ16625 522 aa8.26□□□□□ -1.09
KARSP3-201ENST00000571212 SAP130Q9H0E3 1048 aa8.26□□□□□ -1.09
KARSP3-201ENST00000571212 NAGPAQ9UK23 515 aa8.26□□□□□ -1.09
KARSP3-201ENST00000571212 PRG4Q92954 1404 aaPredicted RBP8.26□□□□□ -1.09
KARSP3-201ENST00000571212 SASH3O75995 380 aa8.25□□□□□ -1.09
KARSP3-201ENST00000571212 SPATA31C1P0DKV0 1188 aa8.25□□□□□ -1.09
KARSP3-201ENST00000571212 IFT43Q96FT9 208 aa8.25□□□□□ -1.09
KARSP3-201ENST00000571212 PRDM6Q9NQX0 595 aa8.25□□□□□ -1.09
KARSP3-201ENST00000571212 ARSDP51689 593 aa8.24□□□□□ -1.09
KARSP3-201ENST00000571212 ELOAQ14241 798 aaKnown RBP8.24□□□□□ -1.09
KARSP3-201ENST00000571212 GRIK4Q16099 956 aa8.24□□□□□ -1.09
KARSP3-201ENST00000571212 MKNK1Q9BUB5 465 aa8.24□□□□□ -1.09
KARSP3-201ENST00000571212 JPH1Q9HDC5 661 aaPredicted RBP8.24□□□□□ -1.09
KARSP3-201ENST00000571212 ZBTB42B2RXF5 422 aa8.24□□□□□ -1.09
KARSP3-201ENST00000571212 LILRB5O75023 590 aa8.24□□□□□ -1.09
KARSP3-201ENST00000571212 EPB42P16452 691 aa8.24□□□□□ -1.09
KARSP3-201ENST00000571212 SWI5Q1ZZU3 235 aa8.24□□□□□ -1.09
KARSP3-201ENST00000571212 FAM26DQ5JW98 314 aa8.24□□□□□ -1.09
KARSP3-201ENST00000571212 PSAPL1Q6NUJ1 521 aa8.24□□□□□ -1.09
KARSP3-201ENST00000571212 RUSC2Q8N2Y8 1516 aa8.23□□□□□ -1.09
KARSP3-201ENST00000571212 MLLT1Q03111 559 aaPredicted RBP8.23□□□□□ -1.09
KARSP3-201ENST00000571212 DOC2BQ14184 412 aa8.23□□□□□ -1.09
KARSP3-201ENST00000571212 PRRT3Q5FWE3 981 aa8.23□□□□□ -1.09
KARSP3-201ENST00000571212 TRAPPC3LQ5T215 181 aa8.23□□□□□ -1.09
KARSP3-201ENST00000571212 TMEM164Q5U3C3 297 aa8.23□□□□□ -1.09
KARSP3-201ENST00000571212 TREML1Q86YW5 311 aa8.23□□□□□ -1.09
KARSP3-201ENST00000571212 RGL4Q8IZJ4 473 aa8.23□□□□□ -1.09
KARSP3-201ENST00000571212 RTCBQ9Y3I0 505 aaKnown RBP8.23□□□□□ -1.09
KARSP3-201ENST00000571212 MAPKBP1O60336 1514 aa8.22□□□□□ -1.09
KARSP3-201ENST00000571212 K7ELQ4 463 aaPredicted RBP8.22□□□□□ -1.09
KARSP3-201ENST00000571212 ATG7O95352 703 aa8.22□□□□□ -1.09
KARSP3-201ENST00000571212 CPB1P15086 417 aa8.22□□□□□ -1.09
KARSP3-201ENST00000571212 PLAURQ03405 335 aa8.22□□□□□ -1.09
KARSP3-201ENST00000571212 TRIM28Q13263 835 aaKnown RBP8.22□□□□□ -1.09
KARSP3-201ENST00000571212 NAA30Q147X3 362 aaPredicted RBP8.22□□□□□ -1.09
KARSP3-201ENST00000571212 CMTR1Q8N1G2 835 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms