RNA–Protein interactions for RNA: ENST00000570146.3

TCF4-244, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-244ENST00000570146 AMER1Q5JTC6 1135 aaPredicted RBP13.73□□□□□ -0.21
TCF4-244ENST00000570146 USP48Q86UV5 1035 aa13.73□□□□□ -0.21
TCF4-244ENST00000570146 COL4A5P29400 1685 aa13.72□□□□□ -0.21
TCF4-244ENST00000570146 PRAMEF22A3QJZ6 481 aa13.72□□□□□ -0.21
TCF4-244ENST00000570146 NBPF26B4DH59 902 aa13.72□□□□□ -0.21
TCF4-244ENST00000570146 KIF23Q02241 960 aaPredicted RBP13.72□□□□□ -0.21
TCF4-244ENST00000570146 NBPF10Q6P3W6 841 aaKnown RBP13.72□□□□□ -0.21
TCF4-244ENST00000570146 DPP8Q6V1X1 898 aaPredicted RBP13.72□□□□□ -0.21
TCF4-244ENST00000570146 NLRP3Q96P20 1036 aa13.72□□□□□ -0.21
TCF4-244ENST00000570146 ZIC5Q96T25 663 aa13.72□□□□□ -0.21
TCF4-244ENST00000570146 GBA2Q9HCG7 927 aaPredicted RBP13.72□□□□□ -0.21
TCF4-244ENST00000570146 RNF186Q9NXI6 227 aa13.72□□□□□ -0.21
TCF4-244ENST00000570146 CNOT7Q9UIV1 285 aaKnown RBP13.72□□□□□ -0.21
TCF4-244ENST00000570146 ATP6V0A2Q9Y487 856 aa13.72□□□□□ -0.21
TCF4-244ENST00000570146 CASP8AP2Q9UKL3 1982 aa13.72□□□□□ -0.21
TCF4-244ENST00000570146 ABCC12Q96J65 1359 aa13.71□□□□□ -0.21
TCF4-244ENST00000570146 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.21
TCF4-244ENST00000570146 RAD17O75943 681 aa13.71□□□□□ -0.21
TCF4-244ENST00000570146 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.21
TCF4-244ENST00000570146 LHX8Q68G74 356 aa13.71□□□□□ -0.21
TCF4-244ENST00000570146 KRT26Q7Z3Y9 468 aa13.71□□□□□ -0.21
TCF4-244ENST00000570146 PPP1R42Q7Z4L9 355 aa13.71□□□□□ -0.21
TCF4-244ENST00000570146 RIC1Q4ADV7 1423 aa13.71□□□□□ -0.22
TCF4-244ENST00000570146 FAM155AB1AL88 458 aaPredicted RBP13.7□□□□□ -0.22
TCF4-244ENST00000570146 HSPA5P11021 654 aaKnown RBP13.7□□□□□ -0.22
TCF4-244ENST00000570146 HIRAP54198 1017 aaPredicted RBP13.7□□□□□ -0.22
TCF4-244ENST00000570146 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
TCF4-244ENST00000570146 DCPSQ96C86 337 aaKnown RBP13.7□□□□□ -0.22
TCF4-244ENST00000570146 RTFDC1Q9BY42 306 aaPredicted RBP13.7□□□□□ -0.22
TCF4-244ENST00000570146 HDAC9Q9UKV0 1011 aa13.7□□□□□ -0.22
TCF4-244ENST00000570146 HPS5Q9UPZ3 1129 aa13.7□□□□□ -0.22
TCF4-244ENST00000570146 MAP3K15Q6ZN16 1313 aa13.69□□□□□ -0.22
TCF4-244ENST00000570146 BBOX1O75936 387 aa13.69□□□□□ -0.22
TCF4-244ENST00000570146 KIAA2012Q0VF49 1180 aa13.69□□□□□ -0.22
TCF4-244ENST00000570146 MICALL2Q8IY33 904 aa13.69□□□□□ -0.22
TCF4-244ENST00000570146 MPNDQ8N594 471 aa13.69□□□□□ -0.22
TCF4-244ENST00000570146 TRPM4Q8TD43 1214 aa13.69□□□□□ -0.22
TCF4-244ENST00000570146 FARP1Q9Y4F1 1045 aaPredicted RBP13.69□□□□□ -0.22
TCF4-244ENST00000570146 GPTP24298 496 aa13.68□□□□□ -0.22
TCF4-244ENST00000570146 DPF2Q92785 391 aa13.68□□□□□ -0.22
TCF4-244ENST00000570146 PARP10Q53GL7 1025 aa13.67□□□□□ -0.22
TCF4-244ENST00000570146 CC2D1BQ5T0F9 858 aaKnown RBP13.67□□□□□ -0.22
TCF4-244ENST00000570146 SUSD4Q5VX71 490 aa13.67□□□□□ -0.22
TCF4-244ENST00000570146 SULF1Q8IWU6 871 aa13.67□□□□□ -0.22
TCF4-244ENST00000570146 SP8Q8IXZ3 490 aa13.67□□□□□ -0.22
TCF4-244ENST00000570146 SLC10A3P09131 477 aa13.66□□□□□ -0.22
TCF4-244ENST00000570146 PRKAR2BP31323 418 aa13.66□□□□□ -0.22
TCF4-244ENST00000570146 MCM10Q7L590 875 aa13.66□□□□□ -0.22
TCF4-244ENST00000570146 CFAP53Q96M91 514 aa13.66□□□□□ -0.22
TCF4-244ENST00000570146 CSRNP1Q96S65 589 aa13.66□□□□□ -0.22
TCF4-244ENST00000570146 NUDCQ9Y266 331 aa13.66□□□□□ -0.22
TCF4-244ENST00000570146 RPS12P25398 132 aaKnown RBP13.65□□□□□ -0.22
TCF4-244ENST00000570146 TMC4Q7Z404 712 aa13.65□□□□□ -0.22
TCF4-244ENST00000570146 PHACTR3Q96KR7 559 aa13.65□□□□□ -0.22
TCF4-244ENST00000570146 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
TCF4-244ENST00000570146 RRP7AQ9Y3A4 280 aaKnown RBP13.65□□□□□ -0.22
TCF4-244ENST00000570146 ABCC4O15439 1325 aa13.64□□□□□ -0.23
TCF4-244ENST00000570146 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
TCF4-244ENST00000570146 HTATSF1O43719 755 aaKnown RBP13.64□□□□□ -0.23
TCF4-244ENST00000570146 NTSR2O95665 410 aa13.64□□□□□ -0.23
TCF4-244ENST00000570146 TAF7Q15545 349 aaPredicted RBP13.64□□□□□ -0.23
TCF4-244ENST00000570146 TBC1D10BQ4KMP7 808 aaPredicted RBP13.64□□□□□ -0.23
TCF4-244ENST00000570146 HABP4Q5JVS0 413 aaKnown RBP13.64□□□□□ -0.23
TCF4-244ENST00000570146 DDX46Q7L014 1031 aaKnown RBP13.64□□□□□ -0.23
TCF4-244ENST00000570146 SAMD7Q7Z3H4 446 aa13.64□□□□□ -0.23
TCF4-244ENST00000570146 PNISRQ8TF01 805 aaKnown RBP13.64□□□□□ -0.23
TCF4-244ENST00000570146 UTP14AQ9BVJ6 771 aaKnown RBP13.64□□□□□ -0.23
TCF4-244ENST00000570146 SIPA1L3O60292 1781 aaPredicted RBP13.63□□□□□ -0.23
TCF4-244ENST00000570146 MYL6BP14649 208 aa13.63□□□□□ -0.23
TCF4-244ENST00000570146 RBM26Q5T8P6 1007 aaKnown RBP13.63□□□□□ -0.23
TCF4-244ENST00000570146 FBXO46Q6PJ61 603 aaPredicted RBP13.63□□□□□ -0.23
TCF4-244ENST00000570146 GIGYF2Q6Y7W6 1299 aaKnown RBP13.63□□□□□ -0.23
TCF4-244ENST00000570146 ZNF34Q8IZ26 560 aa13.63□□□□□ -0.23
TCF4-244ENST00000570146 ADM5C9JUS6 153 aa13.62□□□□□ -0.23
TCF4-244ENST00000570146 FKBP1BP68106 108 aa13.62□□□□□ -0.23
TCF4-244ENST00000570146 WASHC4Q2M389 1173 aa13.62□□□□□ -0.23
TCF4-244ENST00000570146 SLC10A5Q5PT55 438 aa13.62□□□□□ -0.23
TCF4-244ENST00000570146 TTLL7Q6ZT98 887 aa13.62□□□□□ -0.23
TCF4-244ENST00000570146 C3orf67Q6ZVT6 689 aa13.62□□□□□ -0.23
TCF4-244ENST00000570146 RSPH6AQ9H0K4 717 aa13.62□□□□□ -0.23
TCF4-244ENST00000570146 SHTN1A0MZ66 631 aa13.61□□□□□ -0.23
TCF4-244ENST00000570146 YDJCA8MPS7 323 aa13.61□□□□□ -0.23
TCF4-244ENST00000570146 PSMD14O00487 310 aa13.61□□□□□ -0.23
TCF4-244ENST00000570146 GRAPQ13588 217 aa13.61□□□□□ -0.23
TCF4-244ENST00000570146 KIF4BQ2VIQ3 1234 aa13.61□□□□□ -0.23
TCF4-244ENST00000570146 DLK2Q6UY11 383 aa13.61□□□□□ -0.23
TCF4-244ENST00000570146 SLC51AQ86UW1 340 aa13.61□□□□□ -0.23
TCF4-244ENST00000570146 GRAPLQ8TC17 118 aaPredicted RBP13.61□□□□□ -0.23
TCF4-244ENST00000570146 ZNF296Q8WUU4 475 aaPredicted RBP13.61□□□□□ -0.23
TCF4-244ENST00000570146 NEFMP07197 916 aa13.6□□□□□ -0.23
TCF4-244ENST00000570146 U2AF1L5P0DN76 240 aaPredicted RBP13.6□□□□□ -0.23
TCF4-244ENST00000570146 U2AF1Q01081 240 aaKnown RBP eCLIP13.6□□□□□ -0.23
TCF4-244ENST00000570146 RASAL3Q86YV0 1011 aa13.6□□□□□ -0.23
TCF4-244ENST00000570146 EYA3Q99504 573 aa13.6□□□□□ -0.23
TCF4-244ENST00000570146 GGA3Q9NZ52 723 aa13.6□□□□□ -0.23
TCF4-244ENST00000570146 CLCN6P51797 869 aa13.59□□□□□ -0.23
TCF4-244ENST00000570146 DCTN1Q14203 1278 aa13.59□□□□□ -0.23
TCF4-244ENST00000570146 NOM1Q5C9Z4 860 aaKnown RBP13.59□□□□□ -0.23
TCF4-244ENST00000570146 INTS3Q68E01 1043 aaKnown RBP13.59□□□□□ -0.23
TCF4-244ENST00000570146 CDCA5Q96FF9 252 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms