RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 USP17L15C9J2P7 530 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 USP17L10C9JJH3 530 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 USP17L13C9JLJ4 530 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 USP17L12C9JPN9 530 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 USP17L11C9JVI0 530 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 USP17L21D6R901 530 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 USP17L18D6R9N7 530 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 USP17L22D6RA61 530 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 USP17L17D6RBQ6 530 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 USP17L19D6RCP7 530 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 USP17L20D6RJB6 530 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 TARSP26639 723 aaKnown RBP10.45□□□□□ -0.74
CHD9-220ENST00000569794 ARSDP51689 593 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 PLAURQ03405 335 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 USP17L24Q0WX57 530 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 DGKZQ13574 1117 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 KRT25Q7Z3Z0 450 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 NBPF11Q86T75 865 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 ANKMY2Q8IV38 441 aa10.45□□□□□ -0.74
CHD9-220ENST00000569794 QTRT2Q9H974 415 aaKnown RBP10.45□□□□□ -0.74
CHD9-220ENST00000569794 ELMSAN1Q6PJG2 1045 aa10.44□□□□□ -0.74
CHD9-220ENST00000569794 IFT43Q96FT9 208 aa10.44□□□□□ -0.74
CHD9-220ENST00000569794 GPLD1P80108 840 aa10.43□□□□□ -0.74
CHD9-220ENST00000569794 MLLT1Q03111 559 aaPredicted RBP10.43□□□□□ -0.74
CHD9-220ENST00000569794 WFDC8Q8IUA0 241 aa10.43□□□□□ -0.74
CHD9-220ENST00000569794 WFDC12Q8WWY7 111 aa10.43□□□□□ -0.74
CHD9-220ENST00000569794 TTC9Q92623 222 aa10.43□□□□□ -0.74
CHD9-220ENST00000569794 HYAL3O43820 417 aaPredicted RBP10.42□□□□□ -0.74
CHD9-220ENST00000569794 SASH3O75995 380 aa10.42□□□□□ -0.74
CHD9-220ENST00000569794 MICAL2O94851 1124 aa10.42□□□□□ -0.74
CHD9-220ENST00000569794 WEE1P30291 646 aa10.42□□□□□ -0.74
CHD9-220ENST00000569794 ARXQ96QS3 562 aa10.42□□□□□ -0.74
CHD9-220ENST00000569794 RARAP10276 462 aa10.41□□□□□ -0.74
CHD9-220ENST00000569794 NOS3P29474 1203 aa10.41□□□□□ -0.74
CHD9-220ENST00000569794 IREB2P48200 963 aaKnown RBP10.41□□□□□ -0.74
CHD9-220ENST00000569794 CALR3Q96L12 384 aaKnown RBP10.41□□□□□ -0.74
CHD9-220ENST00000569794 FOXO3O43524 673 aa10.4□□□□□ -0.74
CHD9-220ENST00000569794 C11orf91Q3C1V1 193 aa10.4□□□□□ -0.74
CHD9-220ENST00000569794 IGF2-ASQ6U949 168 aa10.4□□□□□ -0.74
CHD9-220ENST00000569794 MYO19Q96H55 970 aa10.4□□□□□ -0.74
CHD9-220ENST00000569794 VRTNQ9H8Y1 702 aa10.4□□□□□ -0.74
CHD9-220ENST00000569794 DEAF1O75398 565 aaPredicted RBP10.39□□□□□ -0.75
CHD9-220ENST00000569794 NRLP54845 237 aa10.39□□□□□ -0.75
CHD9-220ENST00000569794 SMG9Q9H0W8 520 aaKnown RBP10.39□□□□□ -0.75
CHD9-220ENST00000569794 OPLAHO14841 1288 aa10.38□□□□□ -0.75
CHD9-220ENST00000569794 EGFRP00533 1210 aa10.37□□□□□ -0.75
CHD9-220ENST00000569794 ARID4AP29374 1257 aaPredicted RBP10.37□□□□□ -0.75
CHD9-220ENST00000569794 LMOD1P29536 600 aaPredicted RBP10.37□□□□□ -0.75
CHD9-220ENST00000569794 HFE2Q6ZVN8 426 aa10.37□□□□□ -0.75
CHD9-220ENST00000569794 VTI1AQ96AJ9 217 aa10.37□□□□□ -0.75
CHD9-220ENST00000569794 MEGF10Q96KG7 1140 aa10.37□□□□□ -0.75
CHD9-220ENST00000569794 TLR7Q9NYK1 1049 aaKnown RBP10.37□□□□□ -0.75
CHD9-220ENST00000569794 RTCBQ9Y3I0 505 aaKnown RBP10.37□□□□□ -0.75
CHD9-220ENST00000569794 DLL1O00548 723 aa10.36□□□□□ -0.75
CHD9-220ENST00000569794 USP20Q9Y2K6 914 aa10.36□□□□□ -0.75
CHD9-220ENST00000569794 EIF2AK2P19525 551 aaKnown RBP10.35□□□□□ -0.75
CHD9-220ENST00000569794 LRFN2Q9ULH4 789 aa10.35□□□□□ -0.75
CHD9-220ENST00000569794 XYLBO75191 536 aa10.34□□□□□ -0.75
CHD9-220ENST00000569794 RNF112Q9ULX5 631 aa10.34□□□□□ -0.75
CHD9-220ENST00000569794 PRR23CQ6ZRP0 262 aa10.33□□□□□ -0.76
CHD9-220ENST00000569794 PLD4Q96BZ4 506 aa10.33□□□□□ -0.76
CHD9-220ENST00000569794 TREML1Q86YW5 311 aa10.32□□□□□ -0.76
CHD9-220ENST00000569794 DZIP1LQ8IYY4 767 aaKnown RBP10.32□□□□□ -0.76
CHD9-220ENST00000569794 RGL4Q8IZJ4 473 aa10.32□□□□□ -0.76
CHD9-220ENST00000569794 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHD9-220ENST00000569794 LOC102724428A0A0B4J2F2 783 aa10.31□□□□□ -0.76
CHD9-220ENST00000569794 A6NJR5 290 aa10.31□□□□□ -0.76
CHD9-220ENST00000569794 J3QW42 95 aa10.31□□□□□ -0.76
CHD9-220ENST00000569794 SIK1P57059 783 aa10.31□□□□□ -0.76
CHD9-220ENST00000569794 CMTR1Q8N1G2 835 aaKnown RBP10.31□□□□□ -0.76
CHD9-220ENST00000569794 FAM200AQ8TCP9 573 aa10.31□□□□□ -0.76
CHD9-220ENST00000569794 KRTAP4-12Q9BQ66 201 aa10.31□□□□□ -0.76
CHD9-220ENST00000569794 AKTIPQ9H8T0 292 aa10.31□□□□□ -0.76
CHD9-220ENST00000569794 KCNMB2Q9Y691 235 aa10.31□□□□□ -0.76
CHD9-220ENST00000569794 PSAPP07602 524 aa10.3□□□□□ -0.76
CHD9-220ENST00000569794 HOXD8P13378 290 aaPredicted RBP10.3□□□□□ -0.76
CHD9-220ENST00000569794 KRTAP1-3Q8IUG1 177 aa10.3□□□□□ -0.76
CHD9-220ENST00000569794 MMP20O60882 483 aa10.29□□□□□ -0.76
CHD9-220ENST00000569794 COX20Q5RI15 118 aa10.29□□□□□ -0.76
CHD9-220ENST00000569794 CFAP70Q5T0N1 1121 aa10.29□□□□□ -0.76
CHD9-220ENST00000569794 TMEM130Q8N3G9 435 aa10.29□□□□□ -0.76
CHD9-220ENST00000569794 NSUN5Q96P11 429 aaKnown RBP10.29□□□□□ -0.76
CHD9-220ENST00000569794 MRPL18Q9H0U6 180 aaKnown RBP10.29□□□□□ -0.76
CHD9-220ENST00000569794 F8W735 103 aaPredicted RBP10.28□□□□□ -0.76
CHD9-220ENST00000569794 ALX3O95076 343 aa10.28□□□□□ -0.76
CHD9-220ENST00000569794 SOX18P35713 384 aa10.28□□□□□ -0.76
CHD9-220ENST00000569794 FKBP5Q13451 457 aaPredicted RBP10.28□□□□□ -0.76
CHD9-220ENST00000569794 GDF6Q6KF10 455 aaPredicted RBP10.28□□□□□ -0.76
CHD9-220ENST00000569794 IL22RA1Q8N6P7 574 aa10.28□□□□□ -0.76
CHD9-220ENST00000569794 SRA1Q9HD15 236 aaKnown RBP10.28□□□□□ -0.76
CHD9-220ENST00000569794 GHRHP01286 108 aa10.27□□□□□ -0.77
CHD9-220ENST00000569794 SETDB1Q15047 1291 aa10.26□□□□□ -0.77
CHD9-220ENST00000569794 SLC51AQ86UW1 340 aa10.26□□□□□ -0.77
CHD9-220ENST00000569794 FSTP19883 344 aa10.25□□□□□ -0.77
CHD9-220ENST00000569794 Q6ZS46 218 aa10.25□□□□□ -0.77
CHD9-220ENST00000569794 MAP4K3Q8IVH8 894 aa10.25□□□□□ -0.77
CHD9-220ENST00000569794 RBSNQ9H1K0 784 aa10.25□□□□□ -0.77
CHD9-220ENST00000569794 ETFBKMTQ8IXQ9 262 aa10.24□□□□□ -0.77
CHD9-220ENST00000569794 DCAF11Q8TEB1 546 aa10.24□□□□□ -0.77
CHD9-220ENST00000569794 TRIM33Q9UPN9 1127 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms