RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 RILPL2Q969X0 211 aa6.54□□□□□ -1.36
SF3B3-213ENST00000569687 EAF2Q96CJ1 260 aaPredicted RBP6.54□□□□□ -1.36
SF3B3-213ENST00000569687 EVI5LQ96CN4 794 aa6.54□□□□□ -1.36
SF3B3-213ENST00000569687 ISCA1Q9BUE6 129 aa6.54□□□□□ -1.36
SF3B3-213ENST00000569687 CDCA7Q9BWT1 371 aaPredicted RBP6.54□□□□□ -1.36
SF3B3-213ENST00000569687 SHANK3Q9BYB0 1731 aa6.53□□□□□ -1.36
SF3B3-213ENST00000569687 WNK3Q9BYP7 1800 aa6.53□□□□□ -1.36
SF3B3-213ENST00000569687 A0A087WZG4 1122 aa6.53□□□□□ -1.36
SF3B3-213ENST00000569687 HIP1O00291 1037 aa6.53□□□□□ -1.36
SF3B3-213ENST00000569687 A1BGP04217 495 aa6.53□□□□□ -1.36
SF3B3-213ENST00000569687 ATP5JP18859 108 aa6.53□□□□□ -1.36
SF3B3-213ENST00000569687 PTMSP20962 102 aa6.53□□□□□ -1.36
SF3B3-213ENST00000569687 NUCB2P80303 420 aa6.53□□□□□ -1.36
SF3B3-213ENST00000569687 FOXO4P98177 505 aa6.53□□□□□ -1.36
SF3B3-213ENST00000569687 PTPN12Q05209 780 aaKnown RBP6.53□□□□□ -1.36
SF3B3-213ENST00000569687 TCIRG1Q13488 830 aa6.53□□□□□ -1.36
SF3B3-213ENST00000569687 CUL4AQ13619 759 aa6.53□□□□□ -1.36
SF3B3-213ENST00000569687 TSHZ3Q63HK5 1081 aa6.53□□□□□ -1.36
SF3B3-213ENST00000569687 LSG1Q9H089 658 aaKnown RBP6.53□□□□□ -1.36
SF3B3-213ENST00000569687 GPR108Q9NPR9 543 aa6.53□□□□□ -1.36
SF3B3-213ENST00000569687 CWC25Q9NXE8 425 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-213ENST00000569687 TMOD3Q9NYL9 352 aa6.53□□□□□ -1.36
SF3B3-213ENST00000569687 PA2G4Q9UQ80 394 aaKnown RBP6.53□□□□□ -1.36
SF3B3-213ENST00000569687 KCPQ6ZWJ8 1503 aa6.52□□□□□ -1.37
SF3B3-213ENST00000569687 EXOC5O00471 708 aa6.52□□□□□ -1.37
SF3B3-213ENST00000569687 DPYSL4O14531 572 aa6.52□□□□□ -1.37
SF3B3-213ENST00000569687 STARD3NLO95772 234 aa6.52□□□□□ -1.37
SF3B3-213ENST00000569687 CYP2E1P05181 493 aaPredicted RBP6.52□□□□□ -1.37
SF3B3-213ENST00000569687 PRKAR2AP13861 404 aaKnown RBP6.52□□□□□ -1.37
SF3B3-213ENST00000569687 SKOR2Q2VWA4 1001 aaPredicted RBP6.52□□□□□ -1.37
SF3B3-213ENST00000569687 PPP1R15BQ5SWA1 713 aa6.52□□□□□ -1.37
SF3B3-213ENST00000569687 TTLL7Q6ZT98 887 aa6.52□□□□□ -1.37
SF3B3-213ENST00000569687 AACSQ86V21 672 aa6.52□□□□□ -1.37
SF3B3-213ENST00000569687 PIGBQ92521 554 aa6.52□□□□□ -1.37
SF3B3-213ENST00000569687 TNPO1Q92973 898 aaKnown RBP6.52□□□□□ -1.37
SF3B3-213ENST00000569687 INTS4Q96HW7 963 aaKnown RBP6.52□□□□□ -1.37
SF3B3-213ENST00000569687 C8orf37Q96NL8 207 aa6.52□□□□□ -1.37
SF3B3-213ENST00000569687 PLA2G12BQ9BX93 195 aa6.52□□□□□ -1.37
SF3B3-213ENST00000569687 BCL11AQ9H165 835 aa6.52□□□□□ -1.37
SF3B3-213ENST00000569687 THRAP3Q9Y2W1 955 aaKnown RBP6.52□□□□□ -1.37
SF3B3-213ENST00000569687 BCL9LQ86UU0 1499 aa6.52□□□□□ -1.37
SF3B3-213ENST00000569687 GLI3P10071 1580 aa6.52□□□□□ -1.37
SF3B3-213ENST00000569687 SPATA31A1Q5TZJ5 1347 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 SPATA31A5Q5VU36 1347 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 SPATA31A7Q8IWB4 1347 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.51□□□□□ -1.37
SF3B3-213ENST00000569687 TUBGCP6Q96RT7 1819 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 DDX11L8A8MPP1 907 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 ATP5J2-PTCD1G3V325 749 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 PTCD1O75127 700 aaKnown RBP6.51□□□□□ -1.37
SF3B3-213ENST00000569687 CIAO1O76071 339 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 HSP90AA1P07900 732 aaKnown RBP6.51□□□□□ -1.37
SF3B3-213ENST00000569687 NEK4P51957 841 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 KIAA1211Q6ZU35 1233 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 UBE3BQ7Z3V4 1068 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 FNBP4Q8N3X1 1017 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-213ENST00000569687 GBP4Q96PP9 640 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 TM6SF1Q9BZW5 370 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 ALDH8A1Q9H2A2 487 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-213ENST00000569687 ANO2Q9NQ90 1003 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 PALD1Q9ULE6 856 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 C5P01031 1676 aa6.51□□□□□ -1.37
SF3B3-213ENST00000569687 RAD50Q92878 1312 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 UBR2Q8IWV8 1755 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 ERVV-1B6SEH8 477 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 GPR37O15354 613 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 TRAK2O60296 914 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 PCCAP05165 728 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-213ENST00000569687 CSF1RP07333 972 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 IL15P40933 162 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-213ENST00000569687 NECTIN1Q15223 517 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 VPS72Q15906 364 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 TSGA10IPQ3SY00 556 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 HSP90AB3PQ58FF7 597 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 TNNI3KQ59H18 835 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 LMBR1LQ6UX01 489 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 ATG9AQ7Z3C6 839 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 MAP4K1Q92918 833 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 NGLY1Q96IV0 654 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 TMX3Q96JJ7 454 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 CCDC8Q9H0W5 538 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-213ENST00000569687 IL25Q9H293 177 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 DIAPH3Q9NSV4 1193 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 EMILIN3Q9NT22 766 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 ASAP1Q9ULH1 1129 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 SNX14Q9Y5W7 946 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-213ENST00000569687 FPGT-TNNI3KV9GXZ4 949 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 PAPPAQ13219 1627 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 BCL9O00512 1426 aa6.5□□□□□ -1.37
SF3B3-213ENST00000569687 RFX7Q2KHR2 1363 aa6.49□□□□□ -1.37
SF3B3-213ENST00000569687 SPDYE16A6NNV3 312 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-213ENST00000569687 EYA2O00167 538 aa6.49□□□□□ -1.37
SF3B3-213ENST00000569687 MAP4K4O95819 1239 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-213ENST00000569687 CYP19A1P11511 503 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-213ENST00000569687 PIP4K2AP48426 406 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-213ENST00000569687 TFCP2Q12800 502 aa6.49□□□□□ -1.37
SF3B3-213ENST00000569687 MEX3CQ5U5Q3 659 aaKnown RBP6.49□□□□□ -1.37
SF3B3-213ENST00000569687 CWC27Q6UX04 472 aaKnown RBP6.49□□□□□ -1.37
SF3B3-213ENST00000569687 DNAJC10Q8IXB1 793 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms