RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ALDH1B1P30837 517 aa29.29■■■□□ 2.28
RAB40C-212ENST00000569575 LMBR1LQ6UX01 489 aa29.29■■■□□ 2.28
RAB40C-212ENST00000569575 RPGRQ92834 1020 aaKnown RBP29.29■■■□□ 2.28
RAB40C-212ENST00000569575 ANKRD31Q8N7Z5 1873 aa29.29■■■□□ 2.28
RAB40C-212ENST00000569575 LRP5O75197 1615 aa29.28■■■□□ 2.28
RAB40C-212ENST00000569575 SRGNP10124 158 aa29.28■■■□□ 2.28
RAB40C-212ENST00000569575 ATP8B2P98198 1209 aa29.28■■■□□ 2.28
RAB40C-212ENST00000569575 STYK1Q6J9G0 422 aa29.28■■■□□ 2.28
RAB40C-212ENST00000569575 ANKRD44Q8N8A2 993 aa29.28■■■□□ 2.28
RAB40C-212ENST00000569575 EXOC6Q8TAG9 804 aa29.28■■■□□ 2.28
RAB40C-212ENST00000569575 MASTLQ96GX5 879 aa29.28■■■□□ 2.28
RAB40C-212ENST00000569575 RBM17Q96I25 401 aaKnown RBP29.28■■■□□ 2.28
RAB40C-212ENST00000569575 CRAMP1Q96RY5 1269 aa29.28■■■□□ 2.28
RAB40C-212ENST00000569575 HMMRO75330 724 aa29.27■■■□□ 2.28
RAB40C-212ENST00000569575 CCDC57Q2TAC2 916 aa29.27■■■□□ 2.28
RAB40C-212ENST00000569575 DDX46Q7L014 1031 aaKnown RBP29.27■■■□□ 2.28
RAB40C-212ENST00000569575 PPP1R1BQ9UD71 204 aaPredicted RBP29.27■■■□□ 2.28
RAB40C-212ENST00000569575 IFIT5Q13325 482 aaKnown RBP29.26■■■□□ 2.27
RAB40C-212ENST00000569575 EPHA10Q5JZY3 1008 aa29.26■■■□□ 2.27
RAB40C-212ENST00000569575 CDC5LQ99459 802 aaKnown RBP29.26■■■□□ 2.27
RAB40C-212ENST00000569575 FBXO3Q9UK99 471 aa29.26■■■□□ 2.27
RAB40C-212ENST00000569575 TMC4Q7Z404 712 aa29.25■■■□□ 2.27
RAB40C-212ENST00000569575 C2CD5Q86YS7 1000 aa29.25■■■□□ 2.27
RAB40C-212ENST00000569575 CCDC24Q8N4L8 307 aa29.25■■■□□ 2.27
RAB40C-212ENST00000569575 ANKRD18BA2A2Z9 1011 aa29.24■■■□□ 2.27
RAB40C-212ENST00000569575 CEP85Q6P2H3 762 aa29.24■■■□□ 2.27
RAB40C-212ENST00000569575 CNKSR1Q969H4 720 aa29.24■■■□□ 2.27
RAB40C-212ENST00000569575 BBOX1O75936 387 aa29.23■■■□□ 2.27
RAB40C-212ENST00000569575 SSH3Q8TE77 659 aa29.23■■■□□ 2.27
RAB40C-212ENST00000569575 TNRC6CQ9HCJ0 1690 aaKnown RBP29.22■■■□□ 2.27
RAB40C-212ENST00000569575 SRGAP3O43295 1099 aa29.22■■■□□ 2.27
RAB40C-212ENST00000569575 GREM2Q9H772 168 aa29.22■■■□□ 2.27
RAB40C-212ENST00000569575 ITGA6P23229 1130 aa29.21■■■□□ 2.27
RAB40C-212ENST00000569575 CHMP3Q9Y3E7 222 aa29.21■■■□□ 2.27
RAB40C-212ENST00000569575 IRX6P78412 446 aaPredicted RBP29.2■■■□□ 2.26
RAB40C-212ENST00000569575 POLA2Q14181 598 aa29.2■■■□□ 2.26
RAB40C-212ENST00000569575 C3orf67Q6ZVT6 689 aa29.2■■■□□ 2.26
RAB40C-212ENST00000569575 C1orf115Q9H7X2 142 aa29.2■■■□□ 2.26
RAB40C-212ENST00000569575 DLEC1Q9Y238 1755 aa29.19■■■□□ 2.26
RAB40C-212ENST00000569575 RPS8P62241 208 aaKnown RBP29.19■■■□□ 2.26
RAB40C-212ENST00000569575 GRAPQ13588 217 aa29.19■■■□□ 2.26
RAB40C-212ENST00000569575 FAM161AQ3B820 660 aa29.19■■■□□ 2.26
RAB40C-212ENST00000569575 GRAPLQ8TC17 118 aaPredicted RBP29.19■■■□□ 2.26
RAB40C-212ENST00000569575 COPRSQ9NQ92 184 aa29.19■■■□□ 2.26
RAB40C-212ENST00000569575 IGHMBP2P38935 993 aaKnown RBP29.18■■■□□ 2.26
RAB40C-212ENST00000569575 ANKRD18AQ8IVF6 992 aa29.18■■■□□ 2.26
RAB40C-212ENST00000569575 PIM2Q9P1W9 311 aa29.18■■■□□ 2.26
RAB40C-212ENST00000569575 GRIPAP1Q4V328 841 aa29.17■■■□□ 2.26
RAB40C-212ENST00000569575 TAF7LQ5H9L4 462 aa29.17■■■□□ 2.26
RAB40C-212ENST00000569575 DPEP1P16444 411 aa29.16■■■□□ 2.26
RAB40C-212ENST00000569575 HDAC1Q13547 482 aaPredicted RBP29.16■■■□□ 2.26
RAB40C-212ENST00000569575 HSP90AB4PQ58FF6 505 aa29.16■■■□□ 2.26
RAB40C-212ENST00000569575 TTLL6Q8N841 843 aa29.16■■■□□ 2.26
RAB40C-212ENST00000569575 FHDC1Q9C0D6 1143 aaPredicted RBP29.16■■■□□ 2.26
RAB40C-212ENST00000569575 BSDC1Q9NW68 430 aaPredicted RBP29.16■■■□□ 2.26
RAB40C-212ENST00000569575 RFX5P48382 616 aaPredicted RBP29.15■■■□□ 2.26
RAB40C-212ENST00000569575 CC2D2BQ6DHV5 1058 aa29.15■■■□□ 2.26
RAB40C-212ENST00000569575 ZNF622Q969S3 477 aaKnown RBP eCLIP29.15■■■□□ 2.26
RAB40C-212ENST00000569575 MPHOSPH8Q99549 860 aa29.15■■■□□ 2.26
RAB40C-212ENST00000569575 SYT17Q9BSW7 474 aa29.15■■■□□ 2.26
RAB40C-212ENST00000569575 TMX4Q9H1E5 349 aaPredicted RBP29.15■■■□□ 2.26
RAB40C-212ENST00000569575 RWDD1Q9H446 243 aaPredicted RBP29.15■■■□□ 2.26
RAB40C-212ENST00000569575 PCDHB15Q9Y5E8 787 aa29.15■■■□□ 2.26
RAB40C-212ENST00000569575 PNMA6EA0A0J9YXQ4 647 aa29.14■■■□□ 2.26
RAB40C-212ENST00000569575 CIAO1O76071 339 aa29.14■■■□□ 2.26
RAB40C-212ENST00000569575 KCNA3P22001 575 aa29.14■■■□□ 2.26
RAB40C-212ENST00000569575 CHRNA5P30532 468 aa29.14■■■□□ 2.26
RAB40C-212ENST00000569575 NOP58Q9Y2X3 529 aaKnown RBP29.14■■■□□ 2.26
RAB40C-212ENST00000569575 COL11A2P13942 1736 aaPredicted RBP29.14■■■□□ 2.25
RAB40C-212ENST00000569575 KIAA1551Q9HCM1 1747 aa29.14■■■□□ 2.25
RAB40C-212ENST00000569575 A0A0G2JLW4 131 aa29.13■■■□□ 2.25
RAB40C-212ENST00000569575 PTPN12Q05209 780 aaKnown RBP29.13■■■□□ 2.25
RAB40C-212ENST00000569575 KLHL34Q8N239 644 aa29.13■■■□□ 2.25
RAB40C-212ENST00000569575 SEC31BQ9NQW1 1179 aa29.13■■■□□ 2.25
RAB40C-212ENST00000569575 SOGA3Q5TF21 947 aa29.12■■■□□ 2.25
RAB40C-212ENST00000569575 LDHAL6AQ6ZMR3 332 aa29.12■■■□□ 2.25
RAB40C-212ENST00000569575 SIRT2Q8IXJ6 389 aa29.12■■■□□ 2.25
RAB40C-212ENST00000569575 CCDC85AQ96PX6 553 aaPredicted RBP29.12■■■□□ 2.25
RAB40C-212ENST00000569575 SP8Q8IXZ3 490 aa29.11■■■□□ 2.25
RAB40C-212ENST00000569575 EYA2O00167 538 aa29.1■■■□□ 2.25
RAB40C-212ENST00000569575 DALRD3Q5D0E6 543 aaKnown RBP29.1■■■□□ 2.25
RAB40C-212ENST00000569575 CELF1Q92879 486 aaKnown RBP29.1■■■□□ 2.25
RAB40C-212ENST00000569575 IL15P40933 162 aaPredicted RBP29.09■■■□□ 2.25
RAB40C-212ENST00000569575 G3BP1Q13283 466 aaKnown RBP eCLIP29.09■■■□□ 2.25
RAB40C-212ENST00000569575 ERC1Q8IUD2 1116 aa29.09■■■□□ 2.25
RAB40C-212ENST00000569575 ATP6V0A2Q9Y487 856 aa29.09■■■□□ 2.25
RAB40C-212ENST00000569575 BRCA1P38398 1863 aaKnown RBP29.08■■■□□ 2.25
RAB40C-212ENST00000569575 PPEF1O14829 653 aaPredicted RBP29.08■■■□□ 2.25
RAB40C-212ENST00000569575 RAB11FIP3O75154 756 aa29.08■■■□□ 2.25
RAB40C-212ENST00000569575 PRPF40BQ6NWY9 871 aaKnown RBP29.08■■■□□ 2.25
RAB40C-212ENST00000569575 ANKRD2Q9GZV1 360 aa29.08■■■□□ 2.25
RAB40C-212ENST00000569575 DCTPP1Q9H773 170 aa29.08■■■□□ 2.25
RAB40C-212ENST00000569575 CNNM1Q9NRU3 951 aa29.08■■■□□ 2.25
RAB40C-212ENST00000569575 MROH5Q6ZUA9 1318 aa29.08■■■□□ 2.25
RAB40C-212ENST00000569575 GCC1Q96CN9 775 aa29.07■■■□□ 2.24
RAB40C-212ENST00000569575 SURF6O75683 361 aaKnown RBP29.06■■■□□ 2.24
RAB40C-212ENST00000569575 RIPOR2Q9Y4F9 1068 aa29.06■■■□□ 2.24
RAB40C-212ENST00000569575 PPP4R2Q9NY27 417 aa29.05■■■□□ 2.24
RAB40C-212ENST00000569575 NLGN2Q8NFZ4 835 aa29.04■■■□□ 2.24
RAB40C-212ENST00000569575 C7orf43Q8WVR3 580 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms