RNA–Protein interactions for RNA: ENST00000569506.1

NEIL1-223, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-223ENST00000569506 TPTE2Q6XPS3 522 aa20.25■□□□□ 0.83
NEIL1-223ENST00000569506 SSH3Q8TE77 659 aa20.25■□□□□ 0.83
NEIL1-223ENST00000569506 PNMA6EA0A0J9YXQ4 647 aa20.24■□□□□ 0.83
NEIL1-223ENST00000569506 SRGAP3O43295 1099 aa20.24■□□□□ 0.83
NEIL1-223ENST00000569506 PDE8AO60658 829 aa20.24■□□□□ 0.83
NEIL1-223ENST00000569506 POLA2Q14181 598 aa20.24■□□□□ 0.83
NEIL1-223ENST00000569506 NBPF5PQ86XG9 351 aaPredicted RBP20.24■□□□□ 0.83
NEIL1-223ENST00000569506 GCC1Q96CN9 775 aa20.24■□□□□ 0.83
NEIL1-223ENST00000569506 GTF2E1P29083 439 aaPredicted RBP20.23■□□□□ 0.83
NEIL1-223ENST00000569506 DCTPP1Q9H773 170 aa20.23■□□□□ 0.83
NEIL1-223ENST00000569506 SLC10A5Q5PT55 438 aa20.22■□□□□ 0.83
NEIL1-223ENST00000569506 LMBR1LQ6UX01 489 aa20.22■□□□□ 0.83
NEIL1-223ENST00000569506 SMC5Q8IY18 1101 aa20.22■□□□□ 0.83
NEIL1-223ENST00000569506 SYNE4Q8N205 404 aa20.22■□□□□ 0.83
NEIL1-223ENST00000569506 CSF1RP07333 972 aa20.21■□□□□ 0.83
NEIL1-223ENST00000569506 NUTM1Q86Y26 1132 aa20.21■□□□□ 0.83
NEIL1-223ENST00000569506 KIF3CO14782 793 aa20.2■□□□□ 0.82
NEIL1-223ENST00000569506 SERPINB2P05120 415 aa20.2■□□□□ 0.82
NEIL1-223ENST00000569506 CTSWP56202 376 aa20.2■□□□□ 0.82
NEIL1-223ENST00000569506 ERFEQ4G0M1 354 aa20.2■□□□□ 0.82
NEIL1-223ENST00000569506 POLRMTO00411 1230 aaKnown RBP20.19■□□□□ 0.82
NEIL1-223ENST00000569506 NPHP1O15259 732 aa20.19■□□□□ 0.82
NEIL1-223ENST00000569506 HCLS1P14317 486 aaPredicted RBP20.19■□□□□ 0.82
NEIL1-223ENST00000569506 CNBD1Q8NA66 436 aa20.19■□□□□ 0.82
NEIL1-223ENST00000569506 CHMP3Q9Y3E7 222 aa20.19■□□□□ 0.82
NEIL1-223ENST00000569506 DDR1Q08345 913 aa20.18■□□□□ 0.82
NEIL1-223ENST00000569506 HSP90AB4PQ58FF6 505 aa20.18■□□□□ 0.82
NEIL1-223ENST00000569506 TTLL11Q8NHH1 800 aa20.18■□□□□ 0.82
NEIL1-223ENST00000569506 NOP58Q9Y2X3 529 aaKnown RBP20.18■□□□□ 0.82
NEIL1-223ENST00000569506 LAMB2P55268 1798 aa20.17■□□□□ 0.82
NEIL1-223ENST00000569506 APLP1P51693 650 aa20.17■□□□□ 0.82
NEIL1-223ENST00000569506 ST5P78524 1137 aa20.17■□□□□ 0.82
NEIL1-223ENST00000569506 CCDC57Q2TAC2 916 aa20.17■□□□□ 0.82
NEIL1-223ENST00000569506 PARP3Q9Y6F1 533 aa20.17■□□□□ 0.82
NEIL1-223ENST00000569506 KIF13BQ9NQT8 1826 aa20.16■□□□□ 0.82
NEIL1-223ENST00000569506 RAB11FIP3O75154 756 aa20.16■□□□□ 0.82
NEIL1-223ENST00000569506 SURF6O75683 361 aaKnown RBP20.16■□□□□ 0.82
NEIL1-223ENST00000569506 MMP10P09238 476 aa20.16■□□□□ 0.82
NEIL1-223ENST00000569506 RFX5P48382 616 aaPredicted RBP20.16■□□□□ 0.82
NEIL1-223ENST00000569506 CCDC152Q4G0S7 254 aa20.16■□□□□ 0.82
NEIL1-223ENST00000569506 PRR5LQ6MZQ0 368 aa20.16■□□□□ 0.82
NEIL1-223ENST00000569506 NLRP3Q96P20 1036 aa20.16■□□□□ 0.82
NEIL1-223ENST00000569506 COPRSQ9NQ92 184 aa20.16■□□□□ 0.82
NEIL1-223ENST00000569506 WWC3Q9ULE0 1092 aa20.16■□□□□ 0.82
NEIL1-223ENST00000569506 ABCC12Q96J65 1359 aa20.16■□□□□ 0.82
NEIL1-223ENST00000569506 RIC1Q4ADV7 1423 aa20.16■□□□□ 0.82
NEIL1-223ENST00000569506 MYH3P11055 1940 aa20.15■□□□□ 0.82
NEIL1-223ENST00000569506 IFIT5Q13325 482 aaKnown RBP20.15■□□□□ 0.82
NEIL1-223ENST00000569506 SF3B3Q15393 1217 aaKnown RBP20.15■□□□□ 0.82
NEIL1-223ENST00000569506 DDX60Q8IY21 1712 aaKnown RBP20.15■□□□□ 0.82
NEIL1-223ENST00000569506 KIAA1551Q9HCM1 1747 aa20.14■□□□□ 0.81
NEIL1-223ENST00000569506 RTL9Q8NET4 1388 aa20.14■□□□□ 0.81
NEIL1-223ENST00000569506 ANKRD18BA2A2Z9 1011 aa20.14■□□□□ 0.81
NEIL1-223ENST00000569506 FAM161AQ3B820 660 aa20.14■□□□□ 0.81
NEIL1-223ENST00000569506 EXOC6BQ9Y2D4 811 aa20.14■□□□□ 0.81
NEIL1-223ENST00000569506 NUCB1Q02818 461 aa20.13■□□□□ 0.81
NEIL1-223ENST00000569506 PTPN12Q05209 780 aaKnown RBP20.13■□□□□ 0.81
NEIL1-223ENST00000569506 G3BP1Q13283 466 aaKnown RBP eCLIP20.13■□□□□ 0.81
NEIL1-223ENST00000569506 ANKRD45Q5TZF3 282 aa20.13■□□□□ 0.81
NEIL1-223ENST00000569506 ERC1Q8IUD2 1116 aa20.13■□□□□ 0.81
NEIL1-223ENST00000569506 GREM2Q9H772 168 aa20.13■□□□□ 0.81
NEIL1-223ENST00000569506 ZBTB47Q9UFB7 747 aaPredicted RBP20.13■□□□□ 0.81
NEIL1-223ENST00000569506 PDZRN3Q9UPQ7 1066 aa20.13■□□□□ 0.81
NEIL1-223ENST00000569506 ITGA6P23229 1130 aa20.12■□□□□ 0.81
NEIL1-223ENST00000569506 TAF7LQ5H9L4 462 aa20.12■□□□□ 0.81
NEIL1-223ENST00000569506 CCDC85AQ96PX6 553 aaPredicted RBP20.12■□□□□ 0.81
NEIL1-223ENST00000569506 FBXO3Q9UK99 471 aa20.12■□□□□ 0.81
NEIL1-223ENST00000569506 PA2G4Q9UQ80 394 aaKnown RBP20.12■□□□□ 0.81
NEIL1-223ENST00000569506 TOMM70O94826 608 aa20.11■□□□□ 0.81
NEIL1-223ENST00000569506 OS9Q13438 667 aaPredicted RBP20.11■□□□□ 0.81
NEIL1-223ENST00000569506 NRXN2Q9P2S2 1712 aa20.1■□□□□ 0.81
NEIL1-223ENST00000569506 CIAO1O76071 339 aa20.1■□□□□ 0.81
NEIL1-223ENST00000569506 CHD1LQ86WJ1 897 aa20.1■□□□□ 0.81
NEIL1-223ENST00000569506 CCDC24Q8N4L8 307 aa20.1■□□□□ 0.81
NEIL1-223ENST00000569506 DNAJC5GQ8N7S2 189 aa20.1■□□□□ 0.81
NEIL1-223ENST00000569506 KLHDC4Q8TBB5 520 aa20.1■□□□□ 0.81
NEIL1-223ENST00000569506 KIF1BPQ96EK5 621 aa20.1■□□□□ 0.81
NEIL1-223ENST00000569506 LRRCC1Q9C099 1032 aa20.1■□□□□ 0.81
NEIL1-223ENST00000569506 C3orf67Q6ZVT6 689 aa20.09■□□□□ 0.81
NEIL1-223ENST00000569506 BRIP1Q9BX63 1249 aa20.09■□□□□ 0.81
NEIL1-223ENST00000569506 WDR90Q96KV7 1748 aa20.09■□□□□ 0.81
NEIL1-223ENST00000569506 EYA2O00167 538 aa20.08■□□□□ 0.81
NEIL1-223ENST00000569506 APBB1O00213 710 aa20.08■□□□□ 0.81
NEIL1-223ENST00000569506 IL15P40933 162 aaPredicted RBP20.08■□□□□ 0.81
NEIL1-223ENST00000569506 RHPN1Q8TCX5 695 aa20.08■□□□□ 0.81
NEIL1-223ENST00000569506 CDC5LQ99459 802 aaKnown RBP20.08■□□□□ 0.81
NEIL1-223ENST00000569506 SIL1Q9H173 461 aa20.08■□□□□ 0.81
NEIL1-223ENST00000569506 KLRG2A4D1S0 409 aaPredicted RBP20.07■□□□□ 0.8
NEIL1-223ENST00000569506 IGHMBP2P38935 993 aaKnown RBP20.07■□□□□ 0.8
NEIL1-223ENST00000569506 ZNF594Q96JF6 807 aaPredicted RBP20.07■□□□□ 0.8
NEIL1-223ENST00000569506 BRCA1P38398 1863 aaKnown RBP20.07■□□□□ 0.8
NEIL1-223ENST00000569506 PDE6BP35913 854 aa20.06■□□□□ 0.8
NEIL1-223ENST00000569506 TGFB2P61812 414 aa20.06■□□□□ 0.8
NEIL1-223ENST00000569506 CRY2Q49AN0 593 aa20.06■□□□□ 0.8
NEIL1-223ENST00000569506 C10orf71Q711Q0 1435 aa20.06■□□□□ 0.8
NEIL1-223ENST00000569506 DDX46Q7L014 1031 aaKnown RBP20.06■□□□□ 0.8
NEIL1-223ENST00000569506 LNPKQ9C0E8 428 aa20.06■□□□□ 0.8
NEIL1-223ENST00000569506 SEC31BQ9NQW1 1179 aa20.06■□□□□ 0.8
NEIL1-223ENST00000569506 LDHAL6AQ6ZMR3 332 aa20.05■□□□□ 0.8
NEIL1-223ENST00000569506 ANKRD18AQ8IVF6 992 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms