RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 ALDH1B1P30837 517 aa16.43■□□□□ 0.22
CNOT1-217ENST00000569263 SF3B3Q15393 1217 aaKnown RBP16.43■□□□□ 0.22
CNOT1-217ENST00000569263 GPR162Q16538 588 aa16.43■□□□□ 0.22
CNOT1-217ENST00000569263 CCDC152Q4G0S7 254 aa16.43■□□□□ 0.22
CNOT1-217ENST00000569263 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
CNOT1-217ENST00000569263 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
CNOT1-217ENST00000569263 ITPRIPQ8IWB1 547 aa16.43■□□□□ 0.22
CNOT1-217ENST00000569263 PANK1Q8TE04 598 aa16.43■□□□□ 0.22
CNOT1-217ENST00000569263 PLA2G12BQ9BX93 195 aa16.43■□□□□ 0.22
CNOT1-217ENST00000569263 UTYO14607 1347 aa16.43■□□□□ 0.22
CNOT1-217ENST00000569263 HOXA10P31260 410 aaPredicted RBP16.42■□□□□ 0.22
CNOT1-217ENST00000569263 CCDC85AQ96PX6 553 aaPredicted RBP16.42■□□□□ 0.22
CNOT1-217ENST00000569263 USP44Q9H0E7 712 aa16.42■□□□□ 0.22
CNOT1-217ENST00000569263 GNAI3P08754 354 aa16.41■□□□□ 0.22
CNOT1-217ENST00000569263 RLBP1P12271 317 aa16.41■□□□□ 0.22
CNOT1-217ENST00000569263 RRP1P56182 461 aaKnown RBP16.41■□□□□ 0.22
CNOT1-217ENST00000569263 PRPF40BQ6NWY9 871 aaKnown RBP16.41■□□□□ 0.22
CNOT1-217ENST00000569263 SUCLG2Q96I99 432 aa16.41■□□□□ 0.22
CNOT1-217ENST00000569263 CRAMP1Q96RY5 1269 aa16.41■□□□□ 0.22
CNOT1-217ENST00000569263 HDAC5Q9UQL6 1122 aa16.41■□□□□ 0.22
CNOT1-217ENST00000569263 CHMP3Q9Y3E7 222 aa16.41■□□□□ 0.22
CNOT1-217ENST00000569263 TTLL11Q8NHH1 800 aa16.4■□□□□ 0.22
CNOT1-217ENST00000569263 MEIS3Q99687 375 aa16.4■□□□□ 0.22
CNOT1-217ENST00000569263 ZNF219Q9P2Y4 722 aaPredicted RBP16.4■□□□□ 0.22
CNOT1-217ENST00000569263 PPEF1O14829 653 aaPredicted RBP16.39■□□□□ 0.21
CNOT1-217ENST00000569263 YBX3P16989 372 aaKnown RBP eCLIP16.39■□□□□ 0.21
CNOT1-217ENST00000569263 GRAPQ13588 217 aa16.39■□□□□ 0.21
CNOT1-217ENST00000569263 PDE3AQ14432 1141 aa16.39■□□□□ 0.21
CNOT1-217ENST00000569263 GRAPLQ8TC17 118 aaPredicted RBP16.39■□□□□ 0.21
CNOT1-217ENST00000569263 RTL9Q8NET4 1388 aa16.38■□□□□ 0.21
CNOT1-217ENST00000569263 FOXO4P98177 505 aa16.38■□□□□ 0.21
CNOT1-217ENST00000569263 FAM161AQ3B820 660 aa16.38■□□□□ 0.21
CNOT1-217ENST00000569263 EPHA10Q5JZY3 1008 aa16.38■□□□□ 0.21
CNOT1-217ENST00000569263 LMBR1LQ6UX01 489 aa16.38■□□□□ 0.21
CNOT1-217ENST00000569263 CDC5LQ99459 802 aaKnown RBP16.38■□□□□ 0.21
CNOT1-217ENST00000569263 TMX4Q9H1E5 349 aaPredicted RBP16.38■□□□□ 0.21
CNOT1-217ENST00000569263 BICC1Q9H694 974 aaKnown RBP16.38■□□□□ 0.21
CNOT1-217ENST00000569263 GREM2Q9H772 168 aa16.38■□□□□ 0.21
CNOT1-217ENST00000569263 LRRC37AA6NMS7 1700 aa16.38■□□□□ 0.21
CNOT1-217ENST00000569263 C21orf2O43822 256 aa16.37■□□□□ 0.21
CNOT1-217ENST00000569263 GRIN3BO60391 1043 aa16.37■□□□□ 0.21
CNOT1-217ENST00000569263 MVPQ14764 893 aaKnown RBP16.37■□□□□ 0.21
CNOT1-217ENST00000569263 SOGA3Q5TF21 947 aa16.37■□□□□ 0.21
CNOT1-217ENST00000569263 SEC31BQ9NQW1 1179 aa16.37■□□□□ 0.21
CNOT1-217ENST00000569263 DDX19BQ9UMR2 479 aa16.37■□□□□ 0.21
CNOT1-217ENST00000569263 COG6Q9Y2V7 657 aa16.37■□□□□ 0.21
CNOT1-217ENST00000569263 LRRFIP2Q9Y608 721 aaKnown RBP16.37■□□□□ 0.21
CNOT1-217ENST00000569263 COL4A1P02462 1669 aa16.37■□□□□ 0.21
CNOT1-217ENST00000569263 ANKRD18BA2A2Z9 1011 aa16.36■□□□□ 0.21
CNOT1-217ENST00000569263 CSF1RP07333 972 aa16.36■□□□□ 0.21
CNOT1-217ENST00000569263 ITGA6P23229 1130 aa16.36■□□□□ 0.21
CNOT1-217ENST00000569263 IFIT5Q13325 482 aaKnown RBP16.36■□□□□ 0.21
CNOT1-217ENST00000569263 C20orf194Q5TEA3 1177 aa16.36■□□□□ 0.21
CNOT1-217ENST00000569263 TMC4Q7Z404 712 aa16.36■□□□□ 0.21
CNOT1-217ENST00000569263 ANKRD18AQ8IVF6 992 aa16.36■□□□□ 0.21
CNOT1-217ENST00000569263 CELF1Q92879 486 aaKnown RBP16.36■□□□□ 0.21
CNOT1-217ENST00000569263 KAZALD1Q96I82 304 aa16.36■□□□□ 0.21
CNOT1-217ENST00000569263 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
CNOT1-217ENST00000569263 BBOX1O75936 387 aa16.35■□□□□ 0.21
CNOT1-217ENST00000569263 GNAI2P04899 355 aa16.35■□□□□ 0.21
CNOT1-217ENST00000569263 CCDC57Q2TAC2 916 aa16.35■□□□□ 0.21
CNOT1-217ENST00000569263 CCDC93Q567U6 631 aa16.35■□□□□ 0.21
CNOT1-217ENST00000569263 TAF7LQ5H9L4 462 aa16.35■□□□□ 0.21
CNOT1-217ENST00000569263 CHMP4BQ9H444 224 aaKnown RBP16.35■□□□□ 0.21
CNOT1-217ENST00000569263 IGHMBP2P38935 993 aaKnown RBP16.34■□□□□ 0.21
CNOT1-217ENST00000569263 RPS8P62241 208 aaKnown RBP16.34■□□□□ 0.21
CNOT1-217ENST00000569263 RABL6Q3YEC7 729 aaPredicted RBP16.34■□□□□ 0.21
CNOT1-217ENST00000569263 CC2D2BQ6DHV5 1058 aa16.34■□□□□ 0.21
CNOT1-217ENST00000569263 ARHGAP27Q6ZUM4 889 aa16.34■□□□□ 0.21
CNOT1-217ENST00000569263 ANKRD44Q8N8A2 993 aa16.34■□□□□ 0.21
CNOT1-217ENST00000569263 ZBTB7BO15156 539 aaPredicted RBP16.33■□□□□ 0.2
CNOT1-217ENST00000569263 MPHOSPH8Q99549 860 aa16.33■□□□□ 0.2
CNOT1-217ENST00000569263 ATP6V0A2Q9Y487 856 aa16.33■□□□□ 0.2
CNOT1-217ENST00000569263 SUPT16HQ9Y5B9 1047 aaKnown RBP16.33■□□□□ 0.2
CNOT1-217ENST00000569263 CHD4Q14839 1912 aa16.32■□□□□ 0.2
CNOT1-217ENST00000569263 OLFM4Q6UX06 510 aa16.32■□□□□ 0.2
CNOT1-217ENST00000569263 SP8Q8IXZ3 490 aa16.32■□□□□ 0.2
CNOT1-217ENST00000569263 C7orf43Q8WVR3 580 aa16.32■□□□□ 0.2
CNOT1-217ENST00000569263 CCDC88AQ3V6T2 1871 aa16.31■□□□□ 0.2
CNOT1-217ENST00000569263 A0A1B0GUL6 1792 aa16.31■□□□□ 0.2
CNOT1-217ENST00000569263 RTKN2Q8IZC4 609 aa16.31■□□□□ 0.2
CNOT1-217ENST00000569263 C1orf115Q9H7X2 142 aa16.31■□□□□ 0.2
CNOT1-217ENST00000569263 CENPBP07199 599 aaPredicted RBP16.3■□□□□ 0.2
CNOT1-217ENST00000569263 GRIPAP1Q4V328 841 aa16.3■□□□□ 0.2
CNOT1-217ENST00000569263 TAOK3Q9H2K8 898 aa16.3■□□□□ 0.2
CNOT1-217ENST00000569263 BSDC1Q9NW68 430 aaPredicted RBP16.3■□□□□ 0.2
CNOT1-217ENST00000569263 SBF1O95248 1867 aa16.29■□□□□ 0.2
CNOT1-217ENST00000569263 RASSF7Q02833 373 aa16.29■□□□□ 0.2
CNOT1-217ENST00000569263 DPP8Q6V1X1 898 aaPredicted RBP16.29■□□□□ 0.2
CNOT1-217ENST00000569263 SLC51AQ86UW1 340 aa16.29■□□□□ 0.2
CNOT1-217ENST00000569263 ZNF594Q96JF6 807 aaPredicted RBP16.29■□□□□ 0.2
CNOT1-217ENST00000569263 CNNM1Q9NRU3 951 aa16.29■□□□□ 0.2
CNOT1-217ENST00000569263 LTBP1Q14766 1721 aa16.28■□□□□ 0.2
CNOT1-217ENST00000569263 NFKBIEO00221 500 aa16.28■□□□□ 0.2
CNOT1-217ENST00000569263 SRGAP3O43295 1099 aa16.28■□□□□ 0.2
CNOT1-217ENST00000569263 FKBP4Q02790 459 aaKnown RBP eCLIP16.28■□□□□ 0.2
CNOT1-217ENST00000569263 MTX1Q13505 466 aa16.28■□□□□ 0.2
CNOT1-217ENST00000569263 LDHAL6AQ6ZMR3 332 aa16.28■□□□□ 0.2
CNOT1-217ENST00000569263 MPNDQ8N594 471 aa16.28■□□□□ 0.2
CNOT1-217ENST00000569263 ANKIB1Q9P2G1 1089 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms