RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 ZNF541Q9H0D2 1346 aa32.43■■■□□ 2.78
CCNF-205ENST00000569093 PCCAP05165 728 aaPredicted RBP32.42■■■□□ 2.78
CCNF-205ENST00000569093 CEP350Q5VT06 3117 aa32.42■■■□□ 2.78
CCNF-205ENST00000569093 COL4A5P29400 1685 aa32.42■■■□□ 2.78
CCNF-205ENST00000569093 FLIIQ13045 1269 aa32.41■■■□□ 2.78
CCNF-205ENST00000569093 CELF1Q92879 486 aaKnown RBP32.41■■■□□ 2.78
CCNF-205ENST00000569093 COL4A1P02462 1669 aa32.4■■■□□ 2.78
CCNF-205ENST00000569093 FZD9O00144 591 aa32.4■■■□□ 2.78
CCNF-205ENST00000569093 JDP2Q8WYK2 163 aa32.4■■■□□ 2.78
CCNF-205ENST00000569093 CWF19L2Q2TBE0 894 aaKnown RBP32.39■■■□□ 2.78
CCNF-205ENST00000569093 LARGE2Q8N3Y3 721 aa32.39■■■□□ 2.78
CCNF-205ENST00000569093 CACNA1FO60840 1977 aa32.38■■■□□ 2.77
CCNF-205ENST00000569093 NEXNQ0ZGT2 675 aa32.38■■■□□ 2.77
CCNF-205ENST00000569093 MPNDQ8N594 471 aa32.38■■■□□ 2.77
CCNF-205ENST00000569093 FSTL1Q12841 308 aa32.37■■■□□ 2.77
CCNF-205ENST00000569093 FKBP5Q13451 457 aaPredicted RBP32.37■■■□□ 2.77
CCNF-205ENST00000569093 DPP8Q6V1X1 898 aaPredicted RBP32.37■■■□□ 2.77
CCNF-205ENST00000569093 NEURL1BA8MQ27 555 aa32.35■■■□□ 2.77
CCNF-205ENST00000569093 PPIP5K2O43314 1243 aa32.35■■■□□ 2.77
CCNF-205ENST00000569093 AOC3Q16853 763 aa32.35■■■□□ 2.77
CCNF-205ENST00000569093 SMC1BQ8NDV3 1235 aa32.35■■■□□ 2.77
CCNF-205ENST00000569093 RTFDC1Q9BY42 306 aaPredicted RBP32.35■■■□□ 2.77
CCNF-205ENST00000569093 SEC31BQ9NQW1 1179 aa32.35■■■□□ 2.77
CCNF-205ENST00000569093 CCER2I3L3R5 266 aa32.34■■■□□ 2.77
CCNF-205ENST00000569093 PDE8AO60658 829 aa32.34■■■□□ 2.77
CCNF-205ENST00000569093 TMC4Q7Z404 712 aa32.34■■■□□ 2.77
CCNF-205ENST00000569093 L3MBTL3Q96JM7 780 aaPredicted RBP32.34■■■□□ 2.77
CCNF-205ENST00000569093 CCDC85AQ96PX6 553 aaPredicted RBP32.34■■■□□ 2.77
CCNF-205ENST00000569093 HSP90B1P14625 803 aaKnown RBP32.33■■■□□ 2.77
CCNF-205ENST00000569093 RPS8P62241 208 aaKnown RBP32.32■■■□□ 2.76
CCNF-205ENST00000569093 SUPT20HQ8NEM7 779 aa32.32■■■□□ 2.76
CCNF-205ENST00000569093 DNAAF4Q8WXU2 420 aa32.32■■■□□ 2.76
CCNF-205ENST00000569093 CDHR2Q9BYE9 1310 aa32.31■■■□□ 2.76
CCNF-205ENST00000569093 POTEIP0CG38 1075 aa32.31■■■□□ 2.76
CCNF-205ENST00000569093 POTEJP0CG39 1038 aa32.31■■■□□ 2.76
CCNF-205ENST00000569093 EIF6P56537 245 aaKnown RBP32.31■■■□□ 2.76
CCNF-205ENST00000569093 NIM1KQ8IY84 436 aa32.31■■■□□ 2.76
CCNF-205ENST00000569093 GJA3Q9Y6H8 435 aa32.31■■■□□ 2.76
CCNF-205ENST00000569093 LRRC37AA6NMS7 1700 aa32.31■■■□□ 2.76
CCNF-205ENST00000569093 GPC2Q8N158 579 aa32.3■■■□□ 2.76
CCNF-205ENST00000569093 VPS33BQ9H267 617 aa32.3■■■□□ 2.76
CCNF-205ENST00000569093 SCN4AP35499 1836 aa32.29■■■□□ 2.76
CCNF-205ENST00000569093 APLP1P51693 650 aa32.29■■■□□ 2.76
CCNF-205ENST00000569093 CCDC152Q4G0S7 254 aa32.29■■■□□ 2.76
CCNF-205ENST00000569093 NSFL1CQ9UNZ2 370 aaKnown RBP32.29■■■□□ 2.76
CCNF-205ENST00000569093 IQCA1LA6NCM1 817 aa32.28■■■□□ 2.76
CCNF-205ENST00000569093 F6X3S4 739 aa32.28■■■□□ 2.76
CCNF-205ENST00000569093 H7C1W4 665 aa32.28■■■□□ 2.76
CCNF-205ENST00000569093 GCKRQ14397 625 aa32.28■■■□□ 2.76
CCNF-205ENST00000569093 UBE3BQ7Z3V4 1068 aa32.28■■■□□ 2.76
CCNF-205ENST00000569093 TAF1DQ9H5J8 278 aaPredicted RBP32.28■■■□□ 2.76
CCNF-205ENST00000569093 DUOX1Q9NRD9 1551 aa32.28■■■□□ 2.76
CCNF-205ENST00000569093 GPSM2P81274 684 aa32.27■■■□□ 2.76
CCNF-205ENST00000569093 HTRA3P83110 453 aa32.26■■■□□ 2.75
CCNF-205ENST00000569093 KIAA2012Q0VF49 1180 aa32.26■■■□□ 2.75
CCNF-205ENST00000569093 LINS1Q8NG48 757 aa32.26■■■□□ 2.75
CCNF-205ENST00000569093 HACL1Q9UJ83 578 aa32.26■■■□□ 2.75
CCNF-205ENST00000569093 E9PSI1 815 aa32.25■■■□□ 2.75
CCNF-205ENST00000569093 CTSWP56202 376 aa32.25■■■□□ 2.75
CCNF-205ENST00000569093 CDCA7LQ96GN5 454 aa32.25■■■□□ 2.75
CCNF-205ENST00000569093 SLFN5Q08AF3 891 aa32.24■■■□□ 2.75
CCNF-205ENST00000569093 TTLL11Q8NHH1 800 aa32.24■■■□□ 2.75
CCNF-205ENST00000569093 POLLQ9UGP5 575 aa32.24■■■□□ 2.75
CCNF-205ENST00000569093 ZNRF3Q9ULT6 936 aa32.24■■■□□ 2.75
CCNF-205ENST00000569093 MYH3P11055 1940 aa32.23■■■□□ 2.75
CCNF-205ENST00000569093 C6orf229H3BNL8 230 aa32.22■■■□□ 2.75
CCNF-205ENST00000569093 EPHX2P34913 555 aa32.22■■■□□ 2.75
CCNF-205ENST00000569093 CASP7P55210 303 aa32.22■■■□□ 2.75
CCNF-205ENST00000569093 CXCL9Q07325 125 aa32.22■■■□□ 2.75
CCNF-205ENST00000569093 CHADLQ6NUI6 762 aa32.22■■■□□ 2.75
CCNF-205ENST00000569093 RIMBP2O15034 1052 aa32.21■■■□□ 2.75
CCNF-205ENST00000569093 EAPPQ56P03 285 aaPredicted RBP32.21■■■□□ 2.75
CCNF-205ENST00000569093 BEND3Q5T5X7 828 aa32.21■■■□□ 2.75
CCNF-205ENST00000569093 GREM2Q9H772 168 aa32.21■■■□□ 2.75
CCNF-205ENST00000569093 WASHC4Q2M389 1173 aa32.2■■■□□ 2.75
CCNF-205ENST00000569093 GPR101Q96P66 508 aaPredicted RBP32.2■■■□□ 2.75
CCNF-205ENST00000569093 LTBP1Q14766 1721 aa32.2■■■□□ 2.74
CCNF-205ENST00000569093 ANKRD18AQ8IVF6 992 aa32.19■■■□□ 2.74
CCNF-205ENST00000569093 TBC1D16Q8TBP0 767 aa32.19■■■□□ 2.74
CCNF-205ENST00000569093 SCNN1DP51172 638 aa32.18■■■□□ 2.74
CCNF-205ENST00000569093 LDHDQ86WU2 507 aa32.18■■■□□ 2.74
CCNF-205ENST00000569093 DNAJC5GQ8N7S2 189 aa32.18■■■□□ 2.74
CCNF-205ENST00000569093 YDJCA8MPS7 323 aa32.17■■■□□ 2.74
CCNF-205ENST00000569093 RAD17O75943 681 aa32.17■■■□□ 2.74
CCNF-205ENST00000569093 EPS15P42566 896 aa32.17■■■□□ 2.74
CCNF-205ENST00000569093 DIEXFQ68CQ4 756 aaKnown RBP32.16■■■□□ 2.74
CCNF-205ENST00000569093 MIER1Q8N108 512 aa32.16■■■□□ 2.74
CCNF-205ENST00000569093 MRPL50Q8N5N7 158 aaKnown RBP32.16■■■□□ 2.74
CCNF-205ENST00000569093 PLA2G12BQ9BX93 195 aa32.16■■■□□ 2.74
CCNF-205ENST00000569093 PODXL2Q9NZ53 605 aa32.16■■■□□ 2.74
CCNF-205ENST00000569093 ANKIB1Q9P2G1 1089 aa32.16■■■□□ 2.74
CCNF-205ENST00000569093 CLEC11AQ9Y240 323 aa32.16■■■□□ 2.74
CCNF-205ENST00000569093 LMOD1P29536 600 aaPredicted RBP32.15■■■□□ 2.74
CCNF-205ENST00000569093 CIAPIN1Q6FI81 312 aa32.15■■■□□ 2.74
CCNF-205ENST00000569093 CDC5LQ99459 802 aaKnown RBP32.15■■■□□ 2.74
CCNF-205ENST00000569093 DBNDD1Q9H9R9 158 aa32.15■■■□□ 2.74
CCNF-205ENST00000569093 SPEF2Q9C093 1822 aa32.14■■■□□ 2.74
CCNF-205ENST00000569093 DOK7Q18PE1 504 aa32.14■■■□□ 2.74
CCNF-205ENST00000569093 SLC4A10Q6U841 1118 aa32.14■■■□□ 2.74
CCNF-205ENST00000569093 PNMA8AQ86V59 439 aaPredicted RBP32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms