RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 PARP10Q53GL7 1025 aa23.48■■□□□ 1.35
SYNGR3-205ENST00000568896 PNMA8AQ86V59 439 aaPredicted RBP23.48■■□□□ 1.35
SYNGR3-205ENST00000568896 RBM17Q96I25 401 aaKnown RBP23.48■■□□□ 1.35
SYNGR3-205ENST00000568896 PPEF1O14829 653 aaPredicted RBP23.47■■□□□ 1.35
SYNGR3-205ENST00000568896 FOXN1O15353 648 aa23.47■■□□□ 1.35
SYNGR3-205ENST00000568896 SLC4A2P04920 1241 aa23.47■■□□□ 1.35
SYNGR3-205ENST00000568896 EIF6P56537 245 aaKnown RBP23.47■■□□□ 1.35
SYNGR3-205ENST00000568896 CRAMP1Q96RY5 1269 aa23.47■■□□□ 1.35
SYNGR3-205ENST00000568896 HNRNPUQ00839 825 aaKnown RBP eCLIP23.46■■□□□ 1.35
SYNGR3-205ENST00000568896 G2E3Q7L622 706 aa23.46■■□□□ 1.35
SYNGR3-205ENST00000568896 RIC3Q7Z5B4 369 aa23.46■■□□□ 1.35
SYNGR3-205ENST00000568896 LARGE2Q8N3Y3 721 aa23.46■■□□□ 1.35
SYNGR3-205ENST00000568896 PPP1R42Q7Z4L9 355 aa23.45■■□□□ 1.34
SYNGR3-205ENST00000568896 NLRP10Q86W26 655 aa23.45■■□□□ 1.34
SYNGR3-205ENST00000568896 TRMT2AQ8IZ69 625 aaKnown RBP23.45■■□□□ 1.34
SYNGR3-205ENST00000568896 RIC1Q4ADV7 1423 aa23.44■■□□□ 1.34
SYNGR3-205ENST00000568896 DDX58O95786 925 aaKnown RBP23.44■■□□□ 1.34
SYNGR3-205ENST00000568896 ISCA1Q9BUE6 129 aa23.44■■□□□ 1.34
SYNGR3-205ENST00000568896 ADAMTSL1Q8N6G6 1762 aa23.44■■□□□ 1.34
SYNGR3-205ENST00000568896 EPS15P42566 896 aa23.43■■□□□ 1.34
SYNGR3-205ENST00000568896 SCNN1DP51172 638 aa23.43■■□□□ 1.34
SYNGR3-205ENST00000568896 FMR1Q06787 632 aaKnown RBP eCLIP23.43■■□□□ 1.34
SYNGR3-205ENST00000568896 NLRP3Q96P20 1036 aa23.43■■□□□ 1.34
SYNGR3-205ENST00000568896 UTP14AQ9BVJ6 771 aaKnown RBP23.43■■□□□ 1.34
SYNGR3-205ENST00000568896 ATP5J2-PTCD1G3V325 749 aa23.42■■□□□ 1.34
SYNGR3-205ENST00000568896 FLIIQ13045 1269 aa23.42■■□□□ 1.34
SYNGR3-205ENST00000568896 SLC10A5Q5PT55 438 aa23.42■■□□□ 1.34
SYNGR3-205ENST00000568896 LMOD1P29536 600 aaPredicted RBP23.41■■□□□ 1.34
SYNGR3-205ENST00000568896 GRIPAP1Q4V328 841 aa23.41■■□□□ 1.34
SYNGR3-205ENST00000568896 MAP3K2Q9Y2U5 619 aa23.41■■□□□ 1.34
SYNGR3-205ENST00000568896 PI4KAP2A4QPH2 592 aa23.4■■□□□ 1.34
SYNGR3-205ENST00000568896 PPIP5K2O43314 1243 aa23.4■■□□□ 1.34
SYNGR3-205ENST00000568896 DEFB115Q30KQ5 88 aa23.4■■□□□ 1.34
SYNGR3-205ENST00000568896 KSR2Q6VAB6 950 aa23.4■■□□□ 1.34
SYNGR3-205ENST00000568896 NIM1KQ8IY84 436 aa23.4■■□□□ 1.34
SYNGR3-205ENST00000568896 PI4KAP1Q8N8J0 262 aa23.4■■□□□ 1.34
SYNGR3-205ENST00000568896 MYD88Q99836 296 aa23.4■■□□□ 1.34
SYNGR3-205ENST00000568896 METTL22Q9BUU2 404 aaPredicted RBP23.4■■□□□ 1.34
SYNGR3-205ENST00000568896 ATP6V0A2Q9Y487 856 aa23.4■■□□□ 1.34
SYNGR3-205ENST00000568896 LTBP1Q14766 1721 aa23.39■■□□□ 1.34
SYNGR3-205ENST00000568896 ABCC4O15439 1325 aa23.39■■□□□ 1.34
SYNGR3-205ENST00000568896 RASSF10A6NK89 507 aa23.39■■□□□ 1.33
SYNGR3-205ENST00000568896 TRIM28Q13263 835 aaKnown RBP23.39■■□□□ 1.33
SYNGR3-205ENST00000568896 AOC3Q16853 763 aa23.39■■□□□ 1.33
SYNGR3-205ENST00000568896 ZNF428Q96B54 188 aa23.39■■□□□ 1.33
SYNGR3-205ENST00000568896 TRMT112Q9UI30 125 aaKnown RBP23.39■■□□□ 1.33
SYNGR3-205ENST00000568896 HCLS1P14317 486 aaPredicted RBP23.38■■□□□ 1.33
SYNGR3-205ENST00000568896 FKBP5Q13451 457 aaPredicted RBP23.38■■□□□ 1.33
SYNGR3-205ENST00000568896 AIDAQ96BJ3 306 aa23.38■■□□□ 1.33
SYNGR3-205ENST00000568896 WBP1LQ9NX94 342 aa23.38■■□□□ 1.33
SYNGR3-205ENST00000568896 ABT1Q9ULW3 272 aaKnown RBP23.38■■□□□ 1.33
SYNGR3-205ENST00000568896 CTCFP49711 727 aaPredicted RBP23.37■■□□□ 1.33
SYNGR3-205ENST00000568896 PRDM10Q9NQV6 1147 aa23.37■■□□□ 1.33
SYNGR3-205ENST00000568896 SH3TC1Q8TE82 1336 aa23.36■■□□□ 1.33
SYNGR3-205ENST00000568896 CACNA1FO60840 1977 aa23.36■■□□□ 1.33
SYNGR3-205ENST00000568896 TMX4Q9H1E5 349 aaPredicted RBP23.36■■□□□ 1.33
SYNGR3-205ENST00000568896 WDR33Q9C0J8 1336 aaKnown RBP23.35■■□□□ 1.33
SYNGR3-205ENST00000568896 TRAF5O00463 557 aa23.35■■□□□ 1.33
SYNGR3-205ENST00000568896 LBX1P52954 281 aa23.35■■□□□ 1.33
SYNGR3-205ENST00000568896 USP50Q70EL3 339 aaPredicted RBP23.35■■□□□ 1.33
SYNGR3-205ENST00000568896 ZBED9Q6R2W3 1325 aa23.34■■□□□ 1.33
SYNGR3-205ENST00000568896 IGKV5-2P06315 115 aa23.34■■□□□ 1.33
SYNGR3-205ENST00000568896 CXCL9Q07325 125 aa23.34■■□□□ 1.33
SYNGR3-205ENST00000568896 CCDC191Q8NCU4 936 aa23.34■■□□□ 1.33
SYNGR3-205ENST00000568896 BBOX1O75936 387 aa23.33■■□□□ 1.33
SYNGR3-205ENST00000568896 NEXNQ0ZGT2 675 aa23.33■■□□□ 1.33
SYNGR3-205ENST00000568896 CST9Q5W186 159 aa23.33■■□□□ 1.33
SYNGR3-205ENST00000568896 DPP8Q6V1X1 898 aaPredicted RBP23.33■■□□□ 1.33
SYNGR3-205ENST00000568896 SP8Q8IXZ3 490 aa23.33■■□□□ 1.33
SYNGR3-205ENST00000568896 DNAAF4Q8WXU2 420 aa23.33■■□□□ 1.33
SYNGR3-205ENST00000568896 FAM89AQ96GI7 184 aa23.33■■□□□ 1.33
SYNGR3-205ENST00000568896 RTFDC1Q9BY42 306 aaPredicted RBP23.33■■□□□ 1.33
SYNGR3-205ENST00000568896 CWC25Q9NXE8 425 aaPredicted RBP23.33■■□□□ 1.33
SYNGR3-205ENST00000568896 GPRC5DQ9NZD1 345 aa23.33■■□□□ 1.33
SYNGR3-205ENST00000568896 ZNRF3Q9ULT6 936 aa23.33■■□□□ 1.33
SYNGR3-205ENST00000568896 CT47B1P0C2W7 299 aaPredicted RBP23.32■■□□□ 1.32
SYNGR3-205ENST00000568896 MPNDQ8N594 471 aa23.32■■□□□ 1.32
SYNGR3-205ENST00000568896 MRPL50Q8N5N7 158 aaKnown RBP23.32■■□□□ 1.32
SYNGR3-205ENST00000568896 SSH1Q8WYL5 1049 aa23.32■■□□□ 1.32
SYNGR3-205ENST00000568896 VPS33BQ9H267 617 aa23.32■■□□□ 1.32
SYNGR3-205ENST00000568896 GMPSP49915 693 aaPredicted RBP23.31■■□□□ 1.32
SYNGR3-205ENST00000568896 CWF19L2Q2TBE0 894 aaKnown RBP23.31■■□□□ 1.32
SYNGR3-205ENST00000568896 RTL5Q5HYW3 569 aaPredicted RBP23.31■■□□□ 1.32
SYNGR3-205ENST00000568896 SUPT20HQ8NEM7 779 aa23.31■■□□□ 1.32
SYNGR3-205ENST00000568896 ADARB2Q9NS39 739 aaKnown RBP23.31■■□□□ 1.32
SYNGR3-205ENST00000568896 DDX60Q8IY21 1712 aaKnown RBP23.3■■□□□ 1.32
SYNGR3-205ENST00000568896 NEURL1BA8MQ27 555 aa23.3■■□□□ 1.32
SYNGR3-205ENST00000568896 F6X3S4 739 aa23.3■■□□□ 1.32
SYNGR3-205ENST00000568896 HSPA8P11142 646 aaKnown RBP23.3■■□□□ 1.32
SYNGR3-205ENST00000568896 ALDH1L2Q3SY69 923 aa23.3■■□□□ 1.32
SYNGR3-205ENST00000568896 PAXIP1Q6ZW49 1069 aaPredicted RBP23.3■■□□□ 1.32
SYNGR3-205ENST00000568896 DDX46Q7L014 1031 aaKnown RBP23.3■■□□□ 1.32
SYNGR3-205ENST00000568896 ZBTB38Q8NAP3 1195 aaPredicted RBP23.3■■□□□ 1.32
SYNGR3-205ENST00000568896 BCL2L13Q9BXK5 485 aa23.3■■□□□ 1.32
SYNGR3-205ENST00000568896 RAD17O75943 681 aa23.29■■□□□ 1.32
SYNGR3-205ENST00000568896 PCCAP05165 728 aaPredicted RBP23.29■■□□□ 1.32
SYNGR3-205ENST00000568896 GRM1Q13255 1194 aa23.29■■□□□ 1.32
SYNGR3-205ENST00000568896 GRAPQ13588 217 aa23.29■■□□□ 1.32
SYNGR3-205ENST00000568896 CYP4F22Q6NT55 531 aa23.29■■□□□ 1.32
SYNGR3-205ENST00000568896 GRAPLQ8TC17 118 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms