RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 CSF1RP07333 972 aa21.01■□□□□ 0.95
CNEP1R1-210ENST00000568890 DALRD3Q5D0E6 543 aaKnown RBP21.01■□□□□ 0.95
CNEP1R1-210ENST00000568890 C7orf43Q8WVR3 580 aa21.01■□□□□ 0.95
CNEP1R1-210ENST00000568890 DDX60Q8IY21 1712 aaKnown RBP21■□□□□ 0.95
CNEP1R1-210ENST00000568890 COL4A1P02462 1669 aa21■□□□□ 0.95
CNEP1R1-210ENST00000568890 CTSWP56202 376 aa21■□□□□ 0.95
CNEP1R1-210ENST00000568890 PRPF40BQ6NWY9 871 aaKnown RBP21■□□□□ 0.95
CNEP1R1-210ENST00000568890 RPGRQ92834 1020 aaKnown RBP21■□□□□ 0.95
CNEP1R1-210ENST00000568890 GREM2Q9H772 168 aa21■□□□□ 0.95
CNEP1R1-210ENST00000568890 GPR162Q16538 588 aa20.99■□□□□ 0.95
CNEP1R1-210ENST00000568890 CELF1Q92879 486 aaKnown RBP20.99■□□□□ 0.95
CNEP1R1-210ENST00000568890 CRAMP1Q96RY5 1269 aa20.99■□□□□ 0.95
CNEP1R1-210ENST00000568890 ZNF219Q9P2Y4 722 aaPredicted RBP20.99■□□□□ 0.95
CNEP1R1-210ENST00000568890 CNKSR1Q969H4 720 aa20.99■□□□□ 0.95
CNEP1R1-210ENST00000568890 FTSJ3Q8IY81 847 aaKnown RBP20.98■□□□□ 0.95
CNEP1R1-210ENST00000568890 ZBTB7BO15156 539 aaPredicted RBP20.97■□□□□ 0.95
CNEP1R1-210ENST00000568890 C21orf2O43822 256 aa20.97■□□□□ 0.95
CNEP1R1-210ENST00000568890 ALDH1B1P30837 517 aa20.97■□□□□ 0.95
CNEP1R1-210ENST00000568890 LMBR1LQ6UX01 489 aa20.97■□□□□ 0.95
CNEP1R1-210ENST00000568890 RBM17Q96I25 401 aaKnown RBP20.97■□□□□ 0.95
CNEP1R1-210ENST00000568890 BICC1Q9H694 974 aaKnown RBP20.97■□□□□ 0.95
CNEP1R1-210ENST00000568890 ANKRD44Q8N8A2 993 aa20.97■□□□□ 0.95
CNEP1R1-210ENST00000568890 DDX46Q7L014 1031 aaKnown RBP20.96■□□□□ 0.95
CNEP1R1-210ENST00000568890 COG6Q9Y2V7 657 aa20.96■□□□□ 0.95
CNEP1R1-210ENST00000568890 BRCA1P38398 1863 aaKnown RBP20.96■□□□□ 0.95
CNEP1R1-210ENST00000568890 FAM161AQ3B820 660 aa20.96■□□□□ 0.95
CNEP1R1-210ENST00000568890 CCDC152Q4G0S7 254 aa20.96■□□□□ 0.95
CNEP1R1-210ENST00000568890 ITPRIPQ8IWB1 547 aa20.96■□□□□ 0.95
CNEP1R1-210ENST00000568890 SLX4Q8IY92 1834 aa20.95■□□□□ 0.94
CNEP1R1-210ENST00000568890 HSP90B1P14625 803 aaKnown RBP20.95■□□□□ 0.94
CNEP1R1-210ENST00000568890 RRP1P56182 461 aaKnown RBP20.95■□□□□ 0.94
CNEP1R1-210ENST00000568890 GRAPQ13588 217 aa20.94■□□□□ 0.94
CNEP1R1-210ENST00000568890 RABL6Q3YEC7 729 aaPredicted RBP20.94■□□□□ 0.94
CNEP1R1-210ENST00000568890 GRAPLQ8TC17 118 aaPredicted RBP20.94■□□□□ 0.94
CNEP1R1-210ENST00000568890 LRRFIP2Q9Y608 721 aaKnown RBP20.94■□□□□ 0.94
CNEP1R1-210ENST00000568890 LAMB2P55268 1798 aa20.94■□□□□ 0.94
CNEP1R1-210ENST00000568890 TAF1P21675 1872 aa20.94■□□□□ 0.94
CNEP1R1-210ENST00000568890 UBTFL1P0CB47 393 aaPredicted RBP20.94■□□□□ 0.94
CNEP1R1-210ENST00000568890 ITGA6P23229 1130 aa20.94■□□□□ 0.94
CNEP1R1-210ENST00000568890 RPS8P62241 208 aaKnown RBP20.94■□□□□ 0.94
CNEP1R1-210ENST00000568890 PDE3AQ14432 1141 aa20.94■□□□□ 0.94
CNEP1R1-210ENST00000568890 SUPT16HQ9Y5B9 1047 aaKnown RBP20.94■□□□□ 0.94
CNEP1R1-210ENST00000568890 DLEC1Q9Y238 1755 aa20.92■□□□□ 0.94
CNEP1R1-210ENST00000568890 BBOX1O75936 387 aa20.92■□□□□ 0.94
CNEP1R1-210ENST00000568890 PRELPP51888 382 aa20.92■□□□□ 0.94
CNEP1R1-210ENST00000568890 MVPQ14764 893 aaKnown RBP20.92■□□□□ 0.94
CNEP1R1-210ENST00000568890 ZNF594Q96JF6 807 aaPredicted RBP20.91■□□□□ 0.94
CNEP1R1-210ENST00000568890 RTL9Q8NET4 1388 aa20.9■□□□□ 0.94
CNEP1R1-210ENST00000568890 PPEF1O14829 653 aaPredicted RBP20.9■□□□□ 0.94
CNEP1R1-210ENST00000568890 GNAI3P08754 354 aa20.9■□□□□ 0.94
CNEP1R1-210ENST00000568890 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.9■□□□□ 0.94
CNEP1R1-210ENST00000568890 C1orf115Q9H7X2 142 aa20.9■□□□□ 0.94
CNEP1R1-210ENST00000568890 CHMP3Q9Y3E7 222 aa20.9■□□□□ 0.94
CNEP1R1-210ENST00000568890 ATP6V0A2Q9Y487 856 aa20.9■□□□□ 0.94
CNEP1R1-210ENST00000568890 ARHGAP27Q6ZUM4 889 aa20.9■□□□□ 0.94
CNEP1R1-210ENST00000568890 SNED1Q8TER0 1413 aa20.89■□□□□ 0.94
CNEP1R1-210ENST00000568890 WTIPA6NIX2 430 aaPredicted RBP20.89■□□□□ 0.93
CNEP1R1-210ENST00000568890 NFKBIEO00221 500 aa20.89■□□□□ 0.93
CNEP1R1-210ENST00000568890 MS4A1P11836 297 aa20.88■□□□□ 0.93
CNEP1R1-210ENST00000568890 SP8Q8IXZ3 490 aa20.88■□□□□ 0.93
CNEP1R1-210ENST00000568890 KLHDC4Q8TBB5 520 aa20.88■□□□□ 0.93
CNEP1R1-210ENST00000568890 GRIN3BO60391 1043 aa20.88■□□□□ 0.93
CNEP1R1-210ENST00000568890 IFIT5Q13325 482 aaKnown RBP20.88■□□□□ 0.93
CNEP1R1-210ENST00000568890 RFX5P48382 616 aaPredicted RBP20.87■□□□□ 0.93
CNEP1R1-210ENST00000568890 ANKRD18AQ8IVF6 992 aa20.87■□□□□ 0.93
CNEP1R1-210ENST00000568890 ZBTB40Q9NUA8 1239 aa20.87■□□□□ 0.93
CNEP1R1-210ENST00000568890 GNAI2P04899 355 aa20.86■□□□□ 0.93
CNEP1R1-210ENST00000568890 RASSF7Q02833 373 aa20.86■□□□□ 0.93
CNEP1R1-210ENST00000568890 CCDC57Q2TAC2 916 aa20.86■□□□□ 0.93
CNEP1R1-210ENST00000568890 PUS3Q9BZE2 481 aaKnown RBP20.86■□□□□ 0.93
CNEP1R1-210ENST00000568890 BSDC1Q9NW68 430 aaPredicted RBP20.86■□□□□ 0.93
CNEP1R1-210ENST00000568890 ANKRD18BA2A2Z9 1011 aa20.86■□□□□ 0.93
CNEP1R1-210ENST00000568890 MINPP1Q9UNW1 487 aa20.86■□□□□ 0.93
CNEP1R1-210ENST00000568890 PNMA6EA0A0J9YXQ4 647 aa20.85■□□□□ 0.93
CNEP1R1-210ENST00000568890 CDC5LQ99459 802 aaKnown RBP20.85■□□□□ 0.93
CNEP1R1-210ENST00000568890 DDX19BQ9UMR2 479 aa20.85■□□□□ 0.93
CNEP1R1-210ENST00000568890 GPSM2P81274 684 aa20.84■□□□□ 0.93
CNEP1R1-210ENST00000568890 PTPN12Q05209 780 aaKnown RBP20.84■□□□□ 0.93
CNEP1R1-210ENST00000568890 CCDC93Q567U6 631 aa20.84■□□□□ 0.93
CNEP1R1-210ENST00000568890 CACNA1SQ13698 1873 aa20.83■□□□□ 0.93
CNEP1R1-210ENST00000568890 MTX1Q13505 466 aa20.83■□□□□ 0.93
CNEP1R1-210ENST00000568890 MYH3P11055 1940 aa20.83■□□□□ 0.92
CNEP1R1-210ENST00000568890 LRRC24Q50LG9 513 aa20.83■□□□□ 0.92
CNEP1R1-210ENST00000568890 NSFL1CQ9UNZ2 370 aaKnown RBP20.83■□□□□ 0.92
CNEP1R1-210ENST00000568890 PA2G4Q9UQ80 394 aaKnown RBP20.83■□□□□ 0.92
CNEP1R1-210ENST00000568890 ARFGEF1Q9Y6D6 1849 aa20.82■□□□□ 0.92
CNEP1R1-210ENST00000568890 SNAP23O00161 211 aa20.82■□□□□ 0.92
CNEP1R1-210ENST00000568890 LDHAL6AQ6ZMR3 332 aa20.82■□□□□ 0.92
CNEP1R1-210ENST00000568890 RTKN2Q8IZC4 609 aa20.82■□□□□ 0.92
CNEP1R1-210ENST00000568890 CRBNQ96SW2 442 aa20.82■□□□□ 0.92
CNEP1R1-210ENST00000568890 POLLQ9UGP5 575 aa20.82■□□□□ 0.92
CNEP1R1-210ENST00000568890 DCAF8L1A6NGE4 600 aa20.81■□□□□ 0.92
CNEP1R1-210ENST00000568890 SRGAP3O43295 1099 aa20.81■□□□□ 0.92
CNEP1R1-210ENST00000568890 IGHMBP2P38935 993 aaKnown RBP20.81■□□□□ 0.92
CNEP1R1-210ENST00000568890 CC2D2BQ6DHV5 1058 aa20.81■□□□□ 0.92
CNEP1R1-210ENST00000568890 TMC4Q7Z404 712 aa20.81■□□□□ 0.92
CNEP1R1-210ENST00000568890 MPNDQ8N594 471 aa20.81■□□□□ 0.92
CNEP1R1-210ENST00000568890 HELBQ8NG08 1087 aaPredicted RBP20.81■□□□□ 0.92
CNEP1R1-210ENST00000568890 ZNF277Q9NRM2 450 aaPredicted RBP20.81■□□□□ 0.92
CNEP1R1-210ENST00000568890 RIPOR2Q9Y4F9 1068 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms