RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 HSP90B1P14625 803 aaKnown RBP37.72■■■■□ 3.63
RAB40C-211ENST00000568586 RTFDC1Q9BY42 306 aaPredicted RBP37.72■■■■□ 3.63
RAB40C-211ENST00000568586 VPS33BQ9H267 617 aa37.72■■■■□ 3.63
RAB40C-211ENST00000568586 L3MBTL3Q96JM7 780 aaPredicted RBP37.71■■■■□ 3.63
RAB40C-211ENST00000568586 TMX4Q9H1E5 349 aaPredicted RBP37.71■■■■□ 3.63
RAB40C-211ENST00000568586 IGKV5-2P06315 115 aa37.7■■■■□ 3.63
RAB40C-211ENST00000568586 RTL5Q5HYW3 569 aaPredicted RBP37.69■■■■□ 3.62
RAB40C-211ENST00000568586 CACNA1FO60840 1977 aa37.68■■■■□ 3.62
RAB40C-211ENST00000568586 JDP2Q8WYK2 163 aa37.68■■■■□ 3.62
RAB40C-211ENST00000568586 CCER2I3L3R5 266 aa37.67■■■■□ 3.62
RAB40C-211ENST00000568586 FLIIQ13045 1269 aa37.67■■■■□ 3.62
RAB40C-211ENST00000568586 COL4A5P29400 1685 aa37.66■■■■□ 3.62
RAB40C-211ENST00000568586 ZNF541Q9H0D2 1346 aa37.66■■■■□ 3.62
RAB40C-211ENST00000568586 SMC1BQ8NDV3 1235 aa37.66■■■■□ 3.62
RAB40C-211ENST00000568586 NEXNQ0ZGT2 675 aa37.65■■■■□ 3.62
RAB40C-211ENST00000568586 CDHR2Q9BYE9 1310 aa37.64■■■■□ 3.62
RAB40C-211ENST00000568586 SUPT20HQ8NEM7 779 aa37.64■■■■□ 3.62
RAB40C-211ENST00000568586 CELF1Q92879 486 aaKnown RBP37.64■■■■□ 3.62
RAB40C-211ENST00000568586 MPNDQ8N594 471 aa37.63■■■■□ 3.61
RAB40C-211ENST00000568586 TAF1P21675 1872 aa37.62■■■■□ 3.61
RAB40C-211ENST00000568586 LRRC37AA6NMS7 1700 aa37.62■■■■□ 3.61
RAB40C-211ENST00000568586 PDE8AO60658 829 aa37.62■■■■□ 3.61
RAB40C-211ENST00000568586 DPP8Q6V1X1 898 aaPredicted RBP37.62■■■■□ 3.61
RAB40C-211ENST00000568586 LARGE2Q8N3Y3 721 aa37.62■■■■□ 3.61
RAB40C-211ENST00000568586 IQCA1LA6NCM1 817 aa37.61■■■■□ 3.61
RAB40C-211ENST00000568586 NEURL1BA8MQ27 555 aa37.61■■■■□ 3.61
RAB40C-211ENST00000568586 APLP1P51693 650 aa37.61■■■■□ 3.61
RAB40C-211ENST00000568586 GPC2Q8N158 579 aa37.61■■■■□ 3.61
RAB40C-211ENST00000568586 RPS8P62241 208 aaKnown RBP37.59■■■■□ 3.61
RAB40C-211ENST00000568586 SCN4AP35499 1836 aa37.59■■■■□ 3.61
RAB40C-211ENST00000568586 PPIP5K2O43314 1243 aa37.58■■■■□ 3.61
RAB40C-211ENST00000568586 FKBP5Q13451 457 aaPredicted RBP37.58■■■■□ 3.61
RAB40C-211ENST00000568586 CWF19L2Q2TBE0 894 aaKnown RBP37.58■■■■□ 3.61
RAB40C-211ENST00000568586 DNAAF4Q8WXU2 420 aa37.58■■■■□ 3.61
RAB40C-211ENST00000568586 JARID2Q92833 1246 aaPredicted RBP37.58■■■■□ 3.61
RAB40C-211ENST00000568586 COL4A1P02462 1669 aa37.57■■■■□ 3.61
RAB40C-211ENST00000568586 CCDC152Q4G0S7 254 aa37.57■■■■□ 3.6
RAB40C-211ENST00000568586 H7C1W4 665 aa37.56■■■■□ 3.6
RAB40C-211ENST00000568586 EIF6P56537 245 aaKnown RBP37.56■■■■□ 3.6
RAB40C-211ENST00000568586 KIAA2012Q0VF49 1180 aa37.56■■■■□ 3.6
RAB40C-211ENST00000568586 AOC3Q16853 763 aa37.56■■■■□ 3.6
RAB40C-211ENST00000568586 NIM1KQ8IY84 436 aa37.55■■■■□ 3.6
RAB40C-211ENST00000568586 LINS1Q8NG48 757 aa37.55■■■■□ 3.6
RAB40C-211ENST00000568586 TAF1DQ9H5J8 278 aaPredicted RBP37.55■■■■□ 3.6
RAB40C-211ENST00000568586 SEC31BQ9NQW1 1179 aa37.55■■■■□ 3.6
RAB40C-211ENST00000568586 DUOX1Q9NRD9 1551 aa37.55■■■■□ 3.6
RAB40C-211ENST00000568586 E9PSI1 815 aa37.53■■■■□ 3.6
RAB40C-211ENST00000568586 GCKRQ14397 625 aa37.53■■■■□ 3.6
RAB40C-211ENST00000568586 HACL1Q9UJ83 578 aa37.52■■■■□ 3.6
RAB40C-211ENST00000568586 ZNRF3Q9ULT6 936 aa37.52■■■■□ 3.6
RAB40C-211ENST00000568586 CTSWP56202 376 aa37.51■■■■□ 3.6
RAB40C-211ENST00000568586 TTLL11Q8NHH1 800 aa37.5■■■■□ 3.59
RAB40C-211ENST00000568586 PLA2G12BQ9BX93 195 aa37.5■■■■□ 3.59
RAB40C-211ENST00000568586 RTL9Q8NET4 1388 aa37.5■■■■□ 3.59
RAB40C-211ENST00000568586 CASP7P55210 303 aa37.49■■■■□ 3.59
RAB40C-211ENST00000568586 SLFN5Q08AF3 891 aa37.49■■■■□ 3.59
RAB40C-211ENST00000568586 PODXL2Q9NZ53 605 aa37.49■■■■□ 3.59
RAB40C-211ENST00000568586 NSFL1CQ9UNZ2 370 aaKnown RBP37.49■■■■□ 3.59
RAB40C-211ENST00000568586 LTBP1Q14766 1721 aa37.48■■■■□ 3.59
RAB40C-211ENST00000568586 GPSM2P81274 684 aa37.48■■■■□ 3.59
RAB40C-211ENST00000568586 CHADLQ6NUI6 762 aa37.48■■■■□ 3.59
RAB40C-211ENST00000568586 DNAJC5GQ8N7S2 189 aa37.48■■■■□ 3.59
RAB40C-211ENST00000568586 POTEIP0CG38 1075 aa37.47■■■■□ 3.59
RAB40C-211ENST00000568586 POTEJP0CG39 1038 aa37.47■■■■□ 3.59
RAB40C-211ENST00000568586 UBE3BQ7Z3V4 1068 aa37.47■■■■□ 3.59
RAB40C-211ENST00000568586 EPHX2P34913 555 aa37.46■■■■□ 3.59
RAB40C-211ENST00000568586 BEND3Q5T5X7 828 aa37.46■■■■□ 3.59
RAB40C-211ENST00000568586 LDHDQ86WU2 507 aa37.46■■■■□ 3.59
RAB40C-211ENST00000568586 POLLQ9UGP5 575 aa37.46■■■■□ 3.59
RAB40C-211ENST00000568586 CXCL9Q07325 125 aa37.45■■■■□ 3.59
RAB40C-211ENST00000568586 GJA3Q9Y6H8 435 aa37.45■■■■□ 3.59
RAB40C-211ENST00000568586 PNMA8AQ86V59 439 aaPredicted RBP37.44■■■■□ 3.58
RAB40C-211ENST00000568586 TRMT2AQ8IZ69 625 aaKnown RBP37.44■■■■□ 3.58
RAB40C-211ENST00000568586 F6X3S4 739 aa37.43■■■■□ 3.58
RAB40C-211ENST00000568586 SCNN1DP51172 638 aa37.43■■■■□ 3.58
RAB40C-211ENST00000568586 WASHC4Q2M389 1173 aa37.43■■■■□ 3.58
RAB40C-211ENST00000568586 TBC1D16Q8TBP0 767 aa37.43■■■■□ 3.58
RAB40C-211ENST00000568586 CCDC85AQ96PX6 553 aaPredicted RBP37.43■■■■□ 3.58
RAB40C-211ENST00000568586 ANKRD18AQ8IVF6 992 aa37.42■■■■□ 3.58
RAB40C-211ENST00000568586 CDC5LQ99459 802 aaKnown RBP37.42■■■■□ 3.58
RAB40C-211ENST00000568586 GREM2Q9H772 168 aa37.41■■■■□ 3.58
RAB40C-211ENST00000568586 ADAMTSL1Q8N6G6 1762 aa37.41■■■■□ 3.58
RAB40C-211ENST00000568586 MYH3P11055 1940 aa37.41■■■■□ 3.58
RAB40C-211ENST00000568586 CSF1RP07333 972 aa37.4■■■■□ 3.58
RAB40C-211ENST00000568586 EYA3Q99504 573 aa37.39■■■■□ 3.58
RAB40C-211ENST00000568586 YDJCA8MPS7 323 aa37.38■■■■□ 3.57
RAB40C-211ENST00000568586 C6orf229H3BNL8 230 aa37.38■■■■□ 3.57
RAB40C-211ENST00000568586 BSDC1Q9NW68 430 aaPredicted RBP37.38■■■■□ 3.57
RAB40C-211ENST00000568586 LMOD1P29536 600 aaPredicted RBP37.37■■■■□ 3.57
RAB40C-211ENST00000568586 CIAPIN1Q6FI81 312 aa37.37■■■■□ 3.57
RAB40C-211ENST00000568586 MRPL50Q8N5N7 158 aaKnown RBP37.37■■■■□ 3.57
RAB40C-211ENST00000568586 CDCA7LQ96GN5 454 aa37.37■■■■□ 3.57
RAB40C-211ENST00000568586 TNIP1Q15025 636 aa37.36■■■■□ 3.57
RAB40C-211ENST00000568586 EPS15P42566 896 aa37.35■■■■□ 3.57
RAB40C-211ENST00000568586 EAPPQ56P03 285 aaPredicted RBP37.35■■■■□ 3.57
RAB40C-211ENST00000568586 GPRC5DQ9NZD1 345 aa37.35■■■■□ 3.57
RAB40C-211ENST00000568586 ANKIB1Q9P2G1 1089 aa37.35■■■■□ 3.57
RAB40C-211ENST00000568586 XDHP47989 1333 aa37.35■■■■□ 3.57
RAB40C-211ENST00000568586 ALDH1L1O75891 902 aa37.34■■■■□ 3.57
RAB40C-211ENST00000568586 HTRA3P83110 453 aa37.34■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms