RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 ZBTB12Q9Y330 459 aaPredicted RBP12.9□□□□□ -0.34
KARS-209ENST00000568378 POTEFA5A3E0 1075 aa12.89□□□□□ -0.35
KARS-209ENST00000568378 INTS3Q68E01 1043 aaKnown RBP12.89□□□□□ -0.35
KARS-209ENST00000568378 MPNDQ8N594 471 aa12.89□□□□□ -0.35
KARS-209ENST00000568378 DPF2Q92785 391 aa12.89□□□□□ -0.35
KARS-209ENST00000568378 DIAPH1O60610 1272 aaKnown RBP12.88□□□□□ -0.35
KARS-209ENST00000568378 FKTNO75072 461 aa12.88□□□□□ -0.35
KARS-209ENST00000568378 GPTP24298 496 aa12.88□□□□□ -0.35
KARS-209ENST00000568378 NOM1Q5C9Z4 860 aaKnown RBP12.88□□□□□ -0.35
KARS-209ENST00000568378 NGEFQ8N5V2 710 aa12.88□□□□□ -0.35
KARS-209ENST00000568378 CDCA5Q96FF9 252 aa12.88□□□□□ -0.35
KARS-209ENST00000568378 IBTKQ9P2D0 1353 aaPredicted RBP12.88□□□□□ -0.35
KARS-209ENST00000568378 MKI67P46013 3256 aaKnown RBP12.87□□□□□ -0.35
KARS-209ENST00000568378 POLR2AP24928 1970 aaKnown RBP12.87□□□□□ -0.35
KARS-209ENST00000568378 YDJCA8MPS7 323 aa12.87□□□□□ -0.35
KARS-209ENST00000568378 EGFRP00533 1210 aa12.87□□□□□ -0.35
KARS-209ENST00000568378 KIF6Q6ZMV9 814 aa12.87□□□□□ -0.35
KARS-209ENST00000568378 C3orf67Q6ZVT6 689 aa12.87□□□□□ -0.35
KARS-209ENST00000568378 NLRP3Q96P20 1036 aa12.87□□□□□ -0.35
KARS-209ENST00000568378 GGA3Q9NZ52 723 aa12.87□□□□□ -0.35
KARS-209ENST00000568378 ABCC4O15439 1325 aa12.87□□□□□ -0.35
KARS-209ENST00000568378 CEMIPQ8WUJ3 1361 aa12.86□□□□□ -0.35
KARS-209ENST00000568378 ERVV-1B6SEH8 477 aa12.86□□□□□ -0.35
KARS-209ENST00000568378 PSMD14O00487 310 aa12.86□□□□□ -0.35
KARS-209ENST00000568378 KIF4BQ2VIQ3 1234 aa12.86□□□□□ -0.35
KARS-209ENST00000568378 SUSD4Q5VX71 490 aa12.86□□□□□ -0.35
KARS-209ENST00000568378 SP8Q8IXZ3 490 aa12.86□□□□□ -0.35
KARS-209ENST00000568378 KNSTRNQ9Y448 316 aa12.86□□□□□ -0.35
KARS-209ENST00000568378 UBN2Q6ZU65 1347 aa12.86□□□□□ -0.35
KARS-209ENST00000568378 RPS12P25398 132 aaKnown RBP12.85□□□□□ -0.35
KARS-209ENST00000568378 FKBP1BP68106 108 aa12.85□□□□□ -0.35
KARS-209ENST00000568378 CNKSR2Q8WXI2 1034 aa12.85□□□□□ -0.35
KARS-209ENST00000568378 MAP3K15Q6ZN16 1313 aa12.85□□□□□ -0.35
KARS-209ENST00000568378 PAPPA2Q9BXP8 1791 aa12.84□□□□□ -0.35
KARS-209ENST00000568378 U2SURPO15042 1029 aaKnown RBP12.84□□□□□ -0.35
KARS-209ENST00000568378 BBOX1O75936 387 aa12.84□□□□□ -0.35
KARS-209ENST00000568378 NTSR2O95665 410 aa12.84□□□□□ -0.35
KARS-209ENST00000568378 PPP1R42Q7Z4L9 355 aa12.84□□□□□ -0.35
KARS-209ENST00000568378 TRIM17Q9Y577 477 aa12.84□□□□□ -0.35
KARS-209ENST00000568378 NUP98P52948 1817 aa12.83□□□□□ -0.35
KARS-209ENST00000568378 EN2P19622 333 aaPredicted RBP12.83□□□□□ -0.36
KARS-209ENST00000568378 TM4SF4P48230 202 aa12.83□□□□□ -0.36
KARS-209ENST00000568378 SREBF2Q12772 1141 aa12.83□□□□□ -0.36
KARS-209ENST00000568378 MKRN3Q13064 507 aaKnown RBP12.83□□□□□ -0.36
KARS-209ENST00000568378 ZBTB3Q9H5J0 574 aa12.83□□□□□ -0.36
KARS-209ENST00000568378 DBNDD1Q9H9R9 158 aa12.83□□□□□ -0.36
KARS-209ENST00000568378 TTLL12Q14166 644 aaPredicted RBP12.82□□□□□ -0.36
KARS-209ENST00000568378 WASHC4Q2M389 1173 aa12.82□□□□□ -0.36
KARS-209ENST00000568378 ASTN2O75129 1339 aaPredicted RBP12.82□□□□□ -0.36
KARS-209ENST00000568378 RBBP6Q7Z6E9 1792 aaKnown RBP12.81□□□□□ -0.36
KARS-209ENST00000568378 TRIOBPQ9H2D6 2365 aa12.81□□□□□ -0.36
KARS-209ENST00000568378 UBE2Q2LH0YL09 131 aa12.81□□□□□ -0.36
KARS-209ENST00000568378 ANGEL2Q5VTE6 544 aaKnown RBP12.81□□□□□ -0.36
KARS-209ENST00000568378 TTLL7Q6ZT98 887 aa12.81□□□□□ -0.36
KARS-209ENST00000568378 MOB2Q70IA6 237 aa12.81□□□□□ -0.36
KARS-209ENST00000568378 DDX46Q7L014 1031 aaKnown RBP12.81□□□□□ -0.36
KARS-209ENST00000568378 RIMBP2O15034 1052 aa12.8□□□□□ -0.36
KARS-209ENST00000568378 PARP10Q53GL7 1025 aa12.8□□□□□ -0.36
KARS-209ENST00000568378 OTOP1Q7RTM1 612 aa12.8□□□□□ -0.36
KARS-209ENST00000568378 ZNF34Q8IZ26 560 aa12.8□□□□□ -0.36
KARS-209ENST00000568378 RTF1Q92541 710 aaKnown RBP12.8□□□□□ -0.36
KARS-209ENST00000568378 UTP14AQ9BVJ6 771 aaKnown RBP12.8□□□□□ -0.36
KARS-209ENST00000568378 TMEM106CQ9BVX2 250 aa12.8□□□□□ -0.36
KARS-209ENST00000568378 CFHR5Q9BXR6 569 aa12.8□□□□□ -0.36
KARS-209ENST00000568378 R3HDMLQ9H3Y0 253 aa12.8□□□□□ -0.36
KARS-209ENST00000568378 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
KARS-209ENST00000568378 LAMB4A4D0S4 1761 aa12.79□□□□□ -0.36
KARS-209ENST00000568378 SZT2Q5T011 3432 aa12.79□□□□□ -0.36
KARS-209ENST00000568378 DUOX1Q9NRD9 1551 aa12.79□□□□□ -0.36
KARS-209ENST00000568378 H0YGN5 161 aa12.79□□□□□ -0.36
KARS-209ENST00000568378 ECE2O60344 883 aa12.79□□□□□ -0.36
KARS-209ENST00000568378 MYL6BP14649 208 aa12.79□□□□□ -0.36
KARS-209ENST00000568378 GRAPQ13588 217 aa12.79□□□□□ -0.36
KARS-209ENST00000568378 CHRDL2Q6WN34 429 aa12.79□□□□□ -0.36
KARS-209ENST00000568378 GRAPLQ8TC17 118 aaPredicted RBP12.79□□□□□ -0.36
KARS-209ENST00000568378 KIAA0100Q14667 2235 aaKnown RBP12.78□□□□□ -0.36
KARS-209ENST00000568378 C6orf229H3BNL8 230 aa12.78□□□□□ -0.36
KARS-209ENST00000568378 ALDH1A1P00352 501 aa12.78□□□□□ -0.36
KARS-209ENST00000568378 TCIRG1Q13488 830 aa12.78□□□□□ -0.36
KARS-209ENST00000568378 SCARF1Q14162 830 aa12.78□□□□□ -0.36
KARS-209ENST00000568378 DOK7Q18PE1 504 aa12.78□□□□□ -0.36
KARS-209ENST00000568378 SLC10A5Q5PT55 438 aa12.78□□□□□ -0.36
KARS-209ENST00000568378 MCM10Q7L590 875 aa12.78□□□□□ -0.36
KARS-209ENST00000568378 TMC4Q7Z404 712 aa12.78□□□□□ -0.36
KARS-209ENST00000568378 OTUD5Q96G74 571 aa12.78□□□□□ -0.36
KARS-209ENST00000568378 KCNQ5Q9NR82 932 aa12.78□□□□□ -0.36
KARS-209ENST00000568378 RTL9Q8NET4 1388 aa12.78□□□□□ -0.36
KARS-209ENST00000568378 HTTP42858 3142 aa12.77□□□□□ -0.37
KARS-209ENST00000568378 GIGYF2Q6Y7W6 1299 aaKnown RBP12.77□□□□□ -0.37
KARS-209ENST00000568378 ARMC5Q96C12 935 aa12.77□□□□□ -0.37
KARS-209ENST00000568378 NSFL1CQ9UNZ2 370 aaKnown RBP12.77□□□□□ -0.37
KARS-209ENST00000568378 PTPN22Q9Y2R2 807 aa12.77□□□□□ -0.37
KARS-209ENST00000568378 DDX60Q8IY21 1712 aaKnown RBP12.76□□□□□ -0.37
KARS-209ENST00000568378 G3V3G9 751 aa12.76□□□□□ -0.37
KARS-209ENST00000568378 HCLS1P14317 486 aaPredicted RBP12.76□□□□□ -0.37
KARS-209ENST00000568378 PRKAR2BP31323 418 aa12.76□□□□□ -0.37
KARS-209ENST00000568378 NF2P35240 595 aa12.76□□□□□ -0.37
KARS-209ENST00000568378 NCBP3Q53F19 620 aaKnown RBP12.76□□□□□ -0.37
KARS-209ENST00000568378 AMER1Q5JTC6 1135 aaPredicted RBP12.76□□□□□ -0.37
KARS-209ENST00000568378 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms