RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 TNRC6CQ9HCJ0 1690 aaKnown RBP6.1□□□□□ -1.43
HERPUD1-213ENST00000568358 FER1L6Q2WGJ9 1857 aa6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 SLX4Q8IY92 1834 aa6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 BCORQ6W2J9 1755 aa6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 NBPF26B4DH59 902 aa6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 RAD21O60216 631 aa6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 MYL6BP14649 208 aa6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 EIF2S2P20042 333 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 EIF4A1P60842 406 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 PDE4DQ08499 809 aa6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 CCDC93Q567U6 631 aa6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 PRPF40BQ6NWY9 871 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 NBPF10Q6P3W6 841 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 PPP1R42Q7Z4L9 355 aa6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 NBPF15Q8N660 670 aa6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 RPGRQ92834 1020 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 PLSCR2Q9NRY7 297 aa6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 BABAM1Q9NWV8 329 aa6.09□□□□□ -1.43
HERPUD1-213ENST00000568358 MAP3K15Q6ZN16 1313 aa6.08□□□□□ -1.44
HERPUD1-213ENST00000568358 MYBBP1AQ9BQG0 1328 aaKnown RBP6.08□□□□□ -1.44
HERPUD1-213ENST00000568358 IQCA1LA6NCM1 817 aa6.08□□□□□ -1.44
HERPUD1-213ENST00000568358 HLFQ16534 295 aa6.08□□□□□ -1.44
HERPUD1-213ENST00000568358 GRIPAP1Q4V328 841 aa6.08□□□□□ -1.44
HERPUD1-213ENST00000568358 JDP2Q8WYK2 163 aa6.08□□□□□ -1.44
HERPUD1-213ENST00000568358 FAM163AQ96GL9 167 aaPredicted RBP6.08□□□□□ -1.44
HERPUD1-213ENST00000568358 THUMPD2Q9BTF0 503 aaKnown RBP6.08□□□□□ -1.44
HERPUD1-213ENST00000568358 GOPCQ9HD26 462 aa6.08□□□□□ -1.44
HERPUD1-213ENST00000568358 LAS1LQ9Y4W2 734 aaKnown RBP6.08□□□□□ -1.44
HERPUD1-213ENST00000568358 ERBB4Q15303 1308 aa6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 LTBP3Q9NS15 1303 aa6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 NFKBIEO00221 500 aa6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 TMPOP42166 694 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 IRX5P78411 483 aaPredicted RBP6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 FKBP4Q02790 459 aaKnown RBP eCLIP6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 PARP10Q53GL7 1025 aa6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 HSP90AB3PQ58FF7 597 aa6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 CC2D2BQ6DHV5 1058 aa6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 RUNDC1Q96C34 613 aa6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 RBM17Q96I25 401 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 NLRP3Q96P20 1036 aa6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 ZBTB3Q9H5J0 574 aa6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 OCEL1Q9H607 264 aa6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 LAMB4A4D0S4 1761 aa6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 KDM3BQ7LBC6 1761 aa6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 ARFGEF2Q9Y6D5 1785 aa6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 TIAM2Q8IVF5 1701 aa6.07□□□□□ -1.44
HERPUD1-213ENST00000568358 KLRG2A4D1S0 409 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 DDNO94850 711 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 GPTP24298 496 aa6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 EIF6P56537 245 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 GOLGA2Q08379 1002 aa6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 GIGYF2Q6Y7W6 1299 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 TTLL7Q6ZT98 887 aa6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 NUTM1Q86Y26 1132 aa6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 CCDC146Q8IYE0 955 aa6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 SYNE4Q8N205 404 aa6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 DNAJC5GQ8N7S2 189 aa6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 KLRG1Q96E93 195 aa6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 UTP14AQ9BVJ6 771 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 CHMP4AQ9BY43 222 aa6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 ZNF277Q9NRM2 450 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 PCDHB8Q9UN66 801 aa6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 SCN4AP35499 1836 aa6.06□□□□□ -1.44
HERPUD1-213ENST00000568358 COL11A2P13942 1736 aaPredicted RBP6.05□□□□□ -1.44
HERPUD1-213ENST00000568358 WDR90Q96KV7 1748 aa6.05□□□□□ -1.44
HERPUD1-213ENST00000568358 IARSP41252 1262 aaKnown RBP6.05□□□□□ -1.44
HERPUD1-213ENST00000568358 PRELPP51888 382 aa6.05□□□□□ -1.44
HERPUD1-213ENST00000568358 CALD1Q05682 793 aaKnown RBP6.05□□□□□ -1.44
HERPUD1-213ENST00000568358 AIMP1Q12904 312 aaKnown RBP6.05□□□□□ -1.44
HERPUD1-213ENST00000568358 IFFO2Q5TF58 517 aa6.05□□□□□ -1.44
HERPUD1-213ENST00000568358 SUSD4Q5VX71 490 aa6.05□□□□□ -1.44
HERPUD1-213ENST00000568358 COPS6Q7L5N1 327 aa6.05□□□□□ -1.44
HERPUD1-213ENST00000568358 ZNF34Q8IZ26 560 aa6.05□□□□□ -1.44
HERPUD1-213ENST00000568358 C7orf43Q8WVR3 580 aa6.05□□□□□ -1.44
HERPUD1-213ENST00000568358 CRAMP1Q96RY5 1269 aa6.05□□□□□ -1.44
HERPUD1-213ENST00000568358 FAM117AQ9C073 453 aa6.05□□□□□ -1.44
HERPUD1-213ENST00000568358 MTMR7Q9Y216 660 aa6.05□□□□□ -1.44
HERPUD1-213ENST00000568358 CHL1O00533 1208 aa6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 TCERG1O14776 1098 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 HMGB1P09429 215 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 LMOD1P29536 600 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 HOXA10P31260 410 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 HTRA3P83110 453 aa6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 CRY2Q49AN0 593 aa6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 EAPPQ56P03 285 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 DDX46Q7L014 1031 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 PNMA8AQ86V59 439 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 LDHDQ86WU2 507 aa6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 LARGE2Q8N3Y3 721 aa6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 SLAIN1Q8ND83 568 aa6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 SUPT20HQ8NEM7 779 aa6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 PSMD1Q99460 953 aa6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 VPS33BQ9H267 617 aa6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 DDX21Q9NR30 783 aaKnown RBP eCLIP6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 TRMT112Q9UI30 125 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 HACL1Q9UJ83 578 aa6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 ADAMTS8Q9UP79 889 aa6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 IBTKQ9P2D0 1353 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-213ENST00000568358 RNF123Q5XPI4 1314 aa6.03□□□□□ -1.44
HERPUD1-213ENST00000568358 CEP350Q5VT06 3117 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms