RNA–Protein interactions for RNA: ENST00000568316.1

RBBP6-211, Transcript of RB binding protein 6, ubiquitin ligase, human

TSL 5

Gene RBBP6, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP6-211	ENST00000568316	PDE3A	Q14432	1141 aa		31.23	■■■□□ 2.59
RBBP6-211	ENST00000568316	PELP1	Q8IZL8	1130 aa	Known RBP	31.23	■■■□□ 2.59
RBBP6-211	ENST00000568316	RBM17	Q96I25	401 aa	Known RBP	31.23	■■■□□ 2.59
RBBP6-211	ENST00000568316	BRCA1	P38398	1863 aa	Known RBP	31.23	■■■□□ 2.59
RBBP6-211	ENST00000568316	HOXA10	P31260	410 aa	Predicted RBP	31.22	■■■□□ 2.59
RBBP6-211	ENST00000568316	FOXO4	P98177	505 aa		31.22	■■■□□ 2.59
RBBP6-211	ENST00000568316	CCDC152	Q4G0S7	254 aa		31.22	■■■□□ 2.59
RBBP6-211	ENST00000568316	TTLL11	Q8NHH1	800 aa		31.22	■■■□□ 2.59
RBBP6-211	ENST00000568316	KAZALD1	Q96I82	304 aa		31.22	■■■□□ 2.59
RBBP6-211	ENST00000568316	SUPT16H	Q9Y5B9	1047 aa	Known RBP	31.22	■■■□□ 2.59
RBBP6-211	ENST00000568316	MYH3	P11055	1940 aa		31.22	■■■□□ 2.59
RBBP6-211	ENST00000568316	DDX46	Q7L014	1031 aa	Known RBP	31.21	■■■□□ 2.59
RBBP6-211	ENST00000568316	TTLL6	Q8N841	843 aa		31.21	■■■□□ 2.59
RBBP6-211	ENST00000568316	CNKSR1	Q969H4	720 aa		31.21	■■■□□ 2.59
RBBP6-211	ENST00000568316	BCS1L	Q9Y276	419 aa		31.21	■■■□□ 2.59
RBBP6-211	ENST00000568316	GNAI3	P08754	354 aa		31.2	■■■□□ 2.59
RBBP6-211	ENST00000568316	MVP	Q14764	893 aa	Known RBP	31.2	■■■□□ 2.59
RBBP6-211	ENST00000568316	DALRD3	Q5D0E6	543 aa	Known RBP	31.2	■■■□□ 2.59
RBBP6-211	ENST00000568316	LMBR1L	Q6UX01	489 aa		31.19	■■■□□ 2.58
RBBP6-211	ENST00000568316	CRAMP1	Q96RY5	1269 aa		31.19	■■■□□ 2.58
RBBP6-211	ENST00000568316	BICC1	Q9H694	974 aa	Known RBP	31.19	■■■□□ 2.58
RBBP6-211	ENST00000568316	GREM2	Q9H772	168 aa		31.19	■■■□□ 2.58
RBBP6-211	ENST00000568316	CHMP3	Q9Y3E7	222 aa		31.19	■■■□□ 2.58
RBBP6-211	ENST00000568316	CACNA1S	Q13698	1873 aa		31.18	■■■□□ 2.58
RBBP6-211	ENST00000568316	PRPF40B	Q6NWY9	871 aa	Known RBP	31.18	■■■□□ 2.58
RBBP6-211	ENST00000568316	SEC31B	Q9NQW1	1179 aa		31.18	■■■□□ 2.58
RBBP6-211	ENST00000568316	LRRFIP2	Q9Y608	721 aa	Known RBP	31.18	■■■□□ 2.58
RBBP6-211	ENST00000568316	CSF1R	P07333	972 aa		31.17	■■■□□ 2.58
RBBP6-211	ENST00000568316	ALDH1B1	P30837	517 aa		31.17	■■■□□ 2.58
RBBP6-211	ENST00000568316	FAM161A	Q3B820	660 aa		31.17	■■■□□ 2.58
RBBP6-211	ENST00000568316	ZBTB7B	O15156	539 aa	Predicted RBP	31.16	■■■□□ 2.58
RBBP6-211	ENST00000568316	ZNF219	Q9P2Y4	722 aa	Predicted RBP	31.16	■■■□□ 2.58
RBBP6-211	ENST00000568316	SLX4	Q8IY92	1834 aa		31.15	■■■□□ 2.58
RBBP6-211	ENST00000568316	TAF1	P21675	1872 aa		31.15	■■■□□ 2.58
RBBP6-211	ENST00000568316	YBX3	P16989	372 aa	Known RBP eCLIP	31.15	■■■□□ 2.58
RBBP6-211	ENST00000568316	GRAP	Q13588	217 aa		31.15	■■■□□ 2.58
RBBP6-211	ENST00000568316	ANKRD44	Q8N8A2	993 aa		31.15	■■■□□ 2.58
RBBP6-211	ENST00000568316	GRAPL	Q8TC17	118 aa	Predicted RBP	31.15	■■■□□ 2.58
RBBP6-211	ENST00000568316	COL4A1	P02462	1669 aa		31.15	■■■□□ 2.58
RBBP6-211	ENST00000568316	GPR162	Q16538	588 aa		31.14	■■■□□ 2.58
RBBP6-211	ENST00000568316	CELF1	Q92879	486 aa	Known RBP	31.14	■■■□□ 2.58
RBBP6-211	ENST00000568316	DDX19B	Q9UMR2	479 aa		31.14	■■■□□ 2.58
RBBP6-211	ENST00000568316	HDAC5	Q9UQL6	1122 aa		31.14	■■■□□ 2.58
RBBP6-211	ENST00000568316	RTL9	Q8NET4	1388 aa		31.14	■■■□□ 2.58
RBBP6-211	ENST00000568316	ITGA6	P23229	1130 aa		31.13	■■■□□ 2.57
RBBP6-211	ENST00000568316	RABL6	Q3YEC7	729 aa	Predicted RBP	31.13	■■■□□ 2.57
RBBP6-211	ENST00000568316	PPEF1	O14829	653 aa	Predicted RBP	31.12	■■■□□ 2.57
RBBP6-211	ENST00000568316	GNAI2	P04899	355 aa		31.12	■■■□□ 2.57
RBBP6-211	ENST00000568316	C1orf115	Q9H7X2	142 aa		31.12	■■■□□ 2.57
RBBP6-211	ENST00000568316	SLC51A	Q86UW1	340 aa		31.11	■■■□□ 2.57
RBBP6-211	ENST00000568316	C21orf2	O43822	256 aa		31.1	■■■□□ 2.57
RBBP6-211	ENST00000568316	ANKRD18B	A2A2Z9	1011 aa		31.09	■■■□□ 2.57
RBBP6-211	ENST00000568316	BBOX1	O75936	387 aa		31.09	■■■□□ 2.57
RBBP6-211	ENST00000568316	RPS8	P62241	208 aa	Known RBP	31.09	■■■□□ 2.57
RBBP6-211	ENST00000568316	IFIT5	Q13325	482 aa	Known RBP	31.09	■■■□□ 2.57
RBBP6-211	ENST00000568316	OLFM4	Q6UX06	510 aa		31.09	■■■□□ 2.57
RBBP6-211	ENST00000568316	CDC5L	Q99459	802 aa	Known RBP	31.09	■■■□□ 2.57
RBBP6-211	ENST00000568316	CENPB	P07199	599 aa	Predicted RBP	31.08	■■■□□ 2.57
RBBP6-211	ENST00000568316	CCDC57	Q2TAC2	916 aa		31.08	■■■□□ 2.57
RBBP6-211	ENST00000568316	ANKRD18A	Q8IVF6	992 aa		31.08	■■■□□ 2.57
RBBP6-211	ENST00000568316	ARFGEF1	Q9Y6D6	1849 aa		31.08	■■■□□ 2.57
RBBP6-211	ENST00000568316	C7orf43	Q8WVR3	580 aa		31.07	■■■□□ 2.56
RBBP6-211	ENST00000568316	CRBN	Q96SW2	442 aa		31.07	■■■□□ 2.56
RBBP6-211	ENST00000568316	TAF7L	Q5H9L4	462 aa		31.05	■■■□□ 2.56
RBBP6-211	ENST00000568316	ZNF594	Q96JF6	807 aa	Predicted RBP	31.05	■■■□□ 2.56
RBBP6-211	ENST00000568316	SPEF2	Q9C093	1822 aa		31.04	■■■□□ 2.56
RBBP6-211	ENST00000568316	CHMP4B	Q9H444	224 aa	Known RBP	31.04	■■■□□ 2.56
RBBP6-211	ENST00000568316	ZBTB40	Q9NUA8	1239 aa		31.04	■■■□□ 2.56
RBBP6-211	ENST00000568316	ATP6V0A2	Q9Y487	856 aa		31.04	■■■□□ 2.56
RBBP6-211	ENST00000568316	DCAF8L1	A6NGE4	600 aa		31.03	■■■□□ 2.56
RBBP6-211	ENST00000568316	IGHMBP2	P38935	993 aa	Known RBP	31.03	■■■□□ 2.56
RBBP6-211	ENST00000568316	TMC4	Q7Z404	712 aa		31.02	■■■□□ 2.56
RBBP6-211	ENST00000568316	CCDC93	Q567U6	631 aa		31.01	■■■□□ 2.55
RBBP6-211	ENST00000568316	ARHGAP27	Q6ZUM4	889 aa		31.01	■■■□□ 2.55
RBBP6-211	ENST00000568316	SP8	Q8IXZ3	490 aa		31.01	■■■□□ 2.55
RBBP6-211	ENST00000568316	MPHOSPH8	Q99549	860 aa		31.01	■■■□□ 2.55
RBBP6-211	ENST00000568316	TMX4	Q9H1E5	349 aa	Predicted RBP	31.01	■■■□□ 2.55
RBBP6-211	ENST00000568316	SRGAP3	O43295	1099 aa		31	■■■□□ 2.55
RBBP6-211	ENST00000568316	IRX6	P78412	446 aa	Predicted RBP	31	■■■□□ 2.55
RBBP6-211	ENST00000568316	MTX1	Q13505	466 aa		31	■■■□□ 2.55
RBBP6-211	ENST00000568316	SOGA3	Q5TF21	947 aa		31	■■■□□ 2.55
RBBP6-211	ENST00000568316	KLHDC4	Q8TBB5	520 aa		31	■■■□□ 2.55
RBBP6-211	ENST00000568316	GRIN3B	O60391	1043 aa		30.99	■■■□□ 2.55
RBBP6-211	ENST00000568316	BSDC1	Q9NW68	430 aa	Predicted RBP	30.99	■■■□□ 2.55
RBBP6-211	ENST00000568316	PNMA6E	A0A0J9YXQ4	647 aa		30.98	■■■□□ 2.55
RBBP6-211	ENST00000568316	RFX5	P48382	616 aa	Predicted RBP	30.98	■■■□□ 2.55
RBBP6-211	ENST00000568316	CC2D2B	Q6DHV5	1058 aa		30.98	■■■□□ 2.55
RBBP6-211	ENST00000568316	LRRC37A	A6NMS7	1700 aa		30.98	■■■□□ 2.55
RBBP6-211	ENST00000568316	CEP85	Q6P2H3	762 aa		30.96	■■■□□ 2.55
RBBP6-211	ENST00000568316	LDHAL6A	Q6ZMR3	332 aa		30.96	■■■□□ 2.55
RBBP6-211	ENST00000568316	ATP8B2	P98198	1209 aa		30.95	■■■□□ 2.55
RBBP6-211	ENST00000568316	RASSF7	Q02833	373 aa		30.95	■■■□□ 2.55
RBBP6-211	ENST00000568316	RTKN2	Q8IZC4	609 aa		30.95	■■■□□ 2.55
RBBP6-211	ENST00000568316	PUS3	Q9BZE2	481 aa	Known RBP	30.95	■■■□□ 2.55
RBBP6-211	ENST00000568316	CNNM1	Q9NRU3	951 aa		30.95	■■■□□ 2.55
RBBP6-211	ENST00000568316	MINPP1	Q9UNW1	487 aa		30.95	■■■□□ 2.55
RBBP6-211	ENST00000568316	SNED1	Q8TER0	1413 aa		30.95	■■■□□ 2.54
RBBP6-211	ENST00000568316	NFKBIE	O00221	500 aa		30.94	■■■□□ 2.54
RBBP6-211	ENST00000568316	GPSM2	P81274	684 aa		30.94	■■■□□ 2.54
RBBP6-211	ENST00000568316	PTPN12	Q05209	780 aa	Known RBP	30.94	■■■□□ 2.54

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms