RNA–Protein interactions for RNA: ENST00000568292.1

CDH3-207, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-207ENST00000568292 EIF6P56537 245 aaKnown RBP13.13□□□□□ -0.31
CDH3-207ENST00000568292 RPS8P62241 208 aaKnown RBP13.13□□□□□ -0.31
CDH3-207ENST00000568292 FSTL1Q12841 308 aa13.13□□□□□ -0.31
CDH3-207ENST00000568292 DPP8Q6V1X1 898 aaPredicted RBP13.13□□□□□ -0.31
CDH3-207ENST00000568292 LARGE2Q8N3Y3 721 aa13.13□□□□□ -0.31
CDH3-207ENST00000568292 JARID2Q92833 1246 aaPredicted RBP13.13□□□□□ -0.31
CDH3-207ENST00000568292 NEURL1BA8MQ27 555 aa13.12□□□□□ -0.31
CDH3-207ENST00000568292 POTECB2RU33 542 aa13.12□□□□□ -0.31
CDH3-207ENST00000568292 H7C1W4 665 aa13.12□□□□□ -0.31
CDH3-207ENST00000568292 FZD9O00144 591 aa13.12□□□□□ -0.31
CDH3-207ENST00000568292 CCDC152Q4G0S7 254 aa13.12□□□□□ -0.31
CDH3-207ENST00000568292 DIEXFQ68CQ4 756 aaKnown RBP13.12□□□□□ -0.31
CDH3-207ENST00000568292 DNAAF4Q8WXU2 420 aa13.12□□□□□ -0.31
CDH3-207ENST00000568292 RTFDC1Q9BY42 306 aaPredicted RBP13.12□□□□□ -0.31
CDH3-207ENST00000568292 CDHR2Q9BYE9 1310 aa13.12□□□□□ -0.31
CDH3-207ENST00000568292 CACNA1SQ13698 1873 aa13.11□□□□□ -0.31
CDH3-207ENST00000568292 PPIP5K2O43314 1243 aa13.11□□□□□ -0.31
CDH3-207ENST00000568292 SLFN5Q08AF3 891 aa13.11□□□□□ -0.31
CDH3-207ENST00000568292 CWF19L2Q2TBE0 894 aaKnown RBP13.11□□□□□ -0.31
CDH3-207ENST00000568292 NIM1KQ8IY84 436 aa13.11□□□□□ -0.31
CDH3-207ENST00000568292 SMC1BQ8NDV3 1235 aa13.11□□□□□ -0.31
CDH3-207ENST00000568292 LINS1Q8NG48 757 aa13.11□□□□□ -0.31
CDH3-207ENST00000568292 CELF1Q92879 486 aaKnown RBP13.11□□□□□ -0.31
CDH3-207ENST00000568292 CCDC88AQ3V6T2 1871 aa13.1□□□□□ -0.31
CDH3-207ENST00000568292 IQCA1LA6NCM1 817 aa13.1□□□□□ -0.31
CDH3-207ENST00000568292 GCKRQ14397 625 aa13.1□□□□□ -0.31
CDH3-207ENST00000568292 NSFL1CQ9UNZ2 370 aaKnown RBP13.1□□□□□ -0.31
CDH3-207ENST00000568292 SNED1Q8TER0 1413 aa13.1□□□□□ -0.31
CDH3-207ENST00000568292 AOC3Q16853 763 aa13.09□□□□□ -0.31
CDH3-207ENST00000568292 SLC51AQ86UW1 340 aa13.09□□□□□ -0.31
CDH3-207ENST00000568292 GPC2Q8N158 579 aa13.09□□□□□ -0.31
CDH3-207ENST00000568292 L3MBTL3Q96JM7 780 aaPredicted RBP13.09□□□□□ -0.31
CDH3-207ENST00000568292 SEC31BQ9NQW1 1179 aa13.09□□□□□ -0.31
CDH3-207ENST00000568292 APLP1P51693 650 aa13.08□□□□□ -0.32
CDH3-207ENST00000568292 CTSWP56202 376 aa13.08□□□□□ -0.32
CDH3-207ENST00000568292 UBE3BQ7Z3V4 1068 aa13.08□□□□□ -0.32
CDH3-207ENST00000568292 ANKRD18AQ8IVF6 992 aa13.08□□□□□ -0.32
CDH3-207ENST00000568292 TTLL11Q8NHH1 800 aa13.08□□□□□ -0.32
CDH3-207ENST00000568292 CCDC85AQ96PX6 553 aaPredicted RBP13.08□□□□□ -0.32
CDH3-207ENST00000568292 ZNRF3Q9ULT6 936 aa13.08□□□□□ -0.32
CDH3-207ENST00000568292 GJA3Q9Y6H8 435 aa13.08□□□□□ -0.32
CDH3-207ENST00000568292 ZNF541Q9H0D2 1346 aa13.08□□□□□ -0.32
CDH3-207ENST00000568292 DICER1Q9UPY3 1922 aaKnown RBP13.07□□□□□ -0.32
CDH3-207ENST00000568292 F6X3S4 739 aa13.07□□□□□ -0.32
CDH3-207ENST00000568292 C6orf229H3BNL8 230 aa13.07□□□□□ -0.32
CDH3-207ENST00000568292 GPSM2P81274 684 aa13.07□□□□□ -0.32
CDH3-207ENST00000568292 KIAA2012Q0VF49 1180 aa13.07□□□□□ -0.32
CDH3-207ENST00000568292 WASHC4Q2M389 1173 aa13.07□□□□□ -0.32
CDH3-207ENST00000568292 BEND3Q5T5X7 828 aa13.07□□□□□ -0.32
CDH3-207ENST00000568292 TRMT2AQ8IZ69 625 aaKnown RBP13.07□□□□□ -0.32
CDH3-207ENST00000568292 MIER1Q8N108 512 aa13.07□□□□□ -0.32
CDH3-207ENST00000568292 PIAS4Q8N2W9 510 aaPredicted RBP13.07□□□□□ -0.32
CDH3-207ENST00000568292 CDCA7LQ96GN5 454 aa13.07□□□□□ -0.32
CDH3-207ENST00000568292 CDC5LQ99459 802 aaKnown RBP13.07□□□□□ -0.32
CDH3-207ENST00000568292 EYA3Q99504 573 aa13.07□□□□□ -0.32
CDH3-207ENST00000568292 PLA2G12BQ9BX93 195 aa13.07□□□□□ -0.32
CDH3-207ENST00000568292 TAF1DQ9H5J8 278 aaPredicted RBP13.07□□□□□ -0.32
CDH3-207ENST00000568292 HACL1Q9UJ83 578 aa13.07□□□□□ -0.32
CDH3-207ENST00000568292 TIAM2Q8IVF5 1701 aa13.06□□□□□ -0.32
CDH3-207ENST00000568292 WDR90Q96KV7 1748 aa13.06□□□□□ -0.32
CDH3-207ENST00000568292 TNIP1Q15025 636 aa13.06□□□□□ -0.32
CDH3-207ENST00000568292 MRPL50Q8N5N7 158 aaKnown RBP13.06□□□□□ -0.32
CDH3-207ENST00000568292 ANKIB1Q9P2G1 1089 aa13.06□□□□□ -0.32
CDH3-207ENST00000568292 RIMBP2O15034 1052 aa13.05□□□□□ -0.32
CDH3-207ENST00000568292 ALDH1L1O75891 902 aa13.05□□□□□ -0.32
CDH3-207ENST00000568292 LMOD1P29536 600 aaPredicted RBP13.05□□□□□ -0.32
CDH3-207ENST00000568292 EPHX2P34913 555 aa13.05□□□□□ -0.32
CDH3-207ENST00000568292 CASP7P55210 303 aa13.05□□□□□ -0.32
CDH3-207ENST00000568292 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
CDH3-207ENST00000568292 SLC4A10Q6U841 1118 aa13.05□□□□□ -0.32
CDH3-207ENST00000568292 PNMA8AQ86V59 439 aaPredicted RBP13.05□□□□□ -0.32
CDH3-207ENST00000568292 ZC3H12CQ9C0D7 883 aaKnown RBP13.05□□□□□ -0.32
CDH3-207ENST00000568292 PODXL2Q9NZ53 605 aa13.05□□□□□ -0.32
CDH3-207ENST00000568292 POLLQ9UGP5 575 aa13.05□□□□□ -0.32
CDH3-207ENST00000568292 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
CDH3-207ENST00000568292 UTRNP46939 3433 aa13.05□□□□□ -0.32
CDH3-207ENST00000568292 DDX60Q8IY21 1712 aaKnown RBP13.05□□□□□ -0.32
CDH3-207ENST00000568292 LAMB2P55268 1798 aa13.04□□□□□ -0.32
CDH3-207ENST00000568292 G3V3G9 751 aa13.04□□□□□ -0.32
CDH3-207ENST00000568292 CSF1RP07333 972 aa13.04□□□□□ -0.32
CDH3-207ENST00000568292 CXCL9Q07325 125 aa13.04□□□□□ -0.32
CDH3-207ENST00000568292 ALDH1L2Q3SY69 923 aa13.04□□□□□ -0.32
CDH3-207ENST00000568292 EAPPQ56P03 285 aaPredicted RBP13.04□□□□□ -0.32
CDH3-207ENST00000568292 DCAF8Q5TAQ9 597 aa13.04□□□□□ -0.32
CDH3-207ENST00000568292 CIAPIN1Q6FI81 312 aa13.04□□□□□ -0.32
CDH3-207ENST00000568292 TBC1D16Q8TBP0 767 aa13.04□□□□□ -0.32
CDH3-207ENST00000568292 SRCIN1Q9C0H9 1055 aa13.04□□□□□ -0.32
CDH3-207ENST00000568292 GREM2Q9H772 168 aa13.04□□□□□ -0.32
CDH3-207ENST00000568292 BSDC1Q9NW68 430 aaPredicted RBP13.04□□□□□ -0.32
CDH3-207ENST00000568292 C9orf78Q9NZ63 289 aaPredicted RBP13.04□□□□□ -0.32
CDH3-207ENST00000568292 GGA1Q9UJY5 639 aa13.04□□□□□ -0.32
CDH3-207ENST00000568292 CT47B1P0C2W7 299 aaPredicted RBP13.03□□□□□ -0.32
CDH3-207ENST00000568292 ATP2B4P23634 1241 aa13.03□□□□□ -0.32
CDH3-207ENST00000568292 IGHMBP2P38935 993 aaKnown RBP13.03□□□□□ -0.32
CDH3-207ENST00000568292 LDHDQ86WU2 507 aa13.03□□□□□ -0.32
CDH3-207ENST00000568292 SSH1Q8WYL5 1049 aa13.03□□□□□ -0.32
CDH3-207ENST00000568292 CACNA1FO60840 1977 aa13.02□□□□□ -0.32
CDH3-207ENST00000568292 GRM8O00222 908 aa13.02□□□□□ -0.33
CDH3-207ENST00000568292 RAD17O75943 681 aa13.02□□□□□ -0.33
CDH3-207ENST00000568292 ITGA6P23229 1130 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms