RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 DDX58O95786 925 aaKnown RBP12.65□□□□□ -0.38
PALB2-206ENST00000568219 HDGFP51858 240 aaKnown RBP12.65□□□□□ -0.38
PALB2-206ENST00000568219 FKBP4Q02790 459 aaKnown RBP eCLIP12.65□□□□□ -0.38
PALB2-206ENST00000568219 TSR1Q2NL82 804 aaKnown RBP12.65□□□□□ -0.38
PALB2-206ENST00000568219 CCDC150Q8NCX0 1101 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 CAGE1Q8TC20 777 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 ACBD3Q9H3P7 528 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 SLC52A1Q9NWF4 448 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 WASLO00401 505 aaPredicted RBP12.64□□□□□ -0.39
PALB2-206ENST00000568219 SLC27A2O14975 620 aa12.64□□□□□ -0.39
PALB2-206ENST00000568219 TRDNQ13061 729 aa12.64□□□□□ -0.39
PALB2-206ENST00000568219 SMC1AQ14683 1233 aaKnown RBP12.64□□□□□ -0.39
PALB2-206ENST00000568219 CWF19L2Q2TBE0 894 aaKnown RBP12.64□□□□□ -0.39
PALB2-206ENST00000568219 PCMTD1Q96MG8 357 aaPredicted RBP12.64□□□□□ -0.39
PALB2-206ENST00000568219 LSG1Q9H089 658 aaKnown RBP12.64□□□□□ -0.39
PALB2-206ENST00000568219 MRPS27Q92552 414 aaKnown RBP12.64□□□□□ -0.39
PALB2-206ENST00000568219 DRC1Q96MC2 740 aa12.64□□□□□ -0.39
PALB2-206ENST00000568219 ADAMTS12P58397 1594 aa12.64□□□□□ -0.39
PALB2-206ENST00000568219 CLASP1Q7Z460 1538 aa12.64□□□□□ -0.39
PALB2-206ENST00000568219 CBFA2T2O43439 604 aa12.64□□□□□ -0.39
PALB2-206ENST00000568219 ZNF853P0CG23 659 aa12.64□□□□□ -0.39
PALB2-206ENST00000568219 ZSCAN16Q9H4T2 348 aaPredicted RBP12.64□□□□□ -0.39
PALB2-206ENST00000568219 MORC2Q9Y6X9 1032 aaPredicted RBP12.64□□□□□ -0.39
PALB2-206ENST00000568219 KDM5AP29375 1690 aaKnown RBP12.64□□□□□ -0.39
PALB2-206ENST00000568219 RAI14Q9P0K7 980 aa12.63□□□□□ -0.39
PALB2-206ENST00000568219 CTIFO43310 598 aaKnown RBP12.63□□□□□ -0.39
PALB2-206ENST00000568219 MAP3K2Q9Y2U5 619 aa12.63□□□□□ -0.39
PALB2-206ENST00000568219 MPRIPQ6WCQ1 1025 aa12.63□□□□□ -0.39
PALB2-206ENST00000568219 CCDC85AQ96PX6 553 aaPredicted RBP12.63□□□□□ -0.39
PALB2-206ENST00000568219 ATP10AO60312 1499 aa12.63□□□□□ -0.39
PALB2-206ENST00000568219 ABTB2Q8N961 1025 aa12.62□□□□□ -0.39
PALB2-206ENST00000568219 TDRD7Q8NHU6 1098 aaKnown RBP12.62□□□□□ -0.39
PALB2-206ENST00000568219 CENPHQ9H3R5 247 aa12.62□□□□□ -0.39
PALB2-206ENST00000568219 BTBD11A6QL63 1104 aa12.62□□□□□ -0.39
PALB2-206ENST00000568219 PNMA6AP0CW24 399 aaPredicted RBP12.62□□□□□ -0.39
PALB2-206ENST00000568219 HOOK1Q9UJC3 728 aaKnown RBP12.62□□□□□ -0.39
PALB2-206ENST00000568219 PTPDC1A2A3K4 754 aa12.62□□□□□ -0.39
PALB2-206ENST00000568219 PPP2R3AQ06190 1150 aa12.62□□□□□ -0.39
PALB2-206ENST00000568219 SLC26A8Q96RN1 970 aa12.62□□□□□ -0.39
PALB2-206ENST00000568219 USP28Q96RU2 1077 aa12.62□□□□□ -0.39
PALB2-206ENST00000568219 MNAT1P51948 309 aa12.61□□□□□ -0.39
PALB2-206ENST00000568219 PPARDQ03181 441 aa12.61□□□□□ -0.39
PALB2-206ENST00000568219 TMEM87AQ8NBN3 555 aa12.61□□□□□ -0.39
PALB2-206ENST00000568219 GDAP1L1Q96MZ0 367 aa12.61□□□□□ -0.39
PALB2-206ENST00000568219 KIF5CO60282 957 aa12.61□□□□□ -0.39
PALB2-206ENST00000568219 RPS6KB1P23443 525 aa12.61□□□□□ -0.39
PALB2-206ENST00000568219 FAM160A1Q05DH4 1040 aa12.61□□□□□ -0.39
PALB2-206ENST00000568219 MICALL1Q8N3F8 863 aa12.61□□□□□ -0.39
PALB2-206ENST00000568219 CNNM3Q8NE01 707 aa12.61□□□□□ -0.39
PALB2-206ENST00000568219 ORC3Q9UBD5 711 aaPredicted RBP12.61□□□□□ -0.39
PALB2-206ENST00000568219 ETF1P62495 437 aaKnown RBP12.61□□□□□ -0.39
PALB2-206ENST00000568219 ZNF530Q6P9A1 599 aaPredicted RBP12.61□□□□□ -0.39
PALB2-206ENST00000568219 RUFY1Q96T51 708 aa12.61□□□□□ -0.39
PALB2-206ENST00000568219 ZSWIM6Q9HCJ5 1215 aa12.61□□□□□ -0.39
PALB2-206ENST00000568219 SNRKQ9NRH2 765 aa12.61□□□□□ -0.39
PALB2-206ENST00000568219 PLCH2O75038 1416 aa12.6□□□□□ -0.39
PALB2-206ENST00000568219 ADCY10Q96PN6 1610 aa12.6□□□□□ -0.39
PALB2-206ENST00000568219 GOLIM4O00461 696 aa12.6□□□□□ -0.39
PALB2-206ENST00000568219 EPB41L2O43491 1005 aaKnown RBP12.6□□□□□ -0.39
PALB2-206ENST00000568219 IPO7O95373 1038 aaKnown RBP12.6□□□□□ -0.39
PALB2-206ENST00000568219 RAD51AP2Q09MP3 1159 aa12.6□□□□□ -0.39
PALB2-206ENST00000568219 DESI2Q9BSY9 194 aa12.6□□□□□ -0.39
PALB2-206ENST00000568219 PLEKHA4Q9H4M7 779 aa12.6□□□□□ -0.39
PALB2-206ENST00000568219 TRIM66O15016 1216 aa12.6□□□□□ -0.39
PALB2-206ENST00000568219 HSP90AB3PQ58FF7 597 aa12.6□□□□□ -0.39
PALB2-206ENST00000568219 RRP12Q5JTH9 1297 aaKnown RBP12.6□□□□□ -0.39
PALB2-206ENST00000568219 PGBD1Q96JS3 809 aa12.6□□□□□ -0.39
PALB2-206ENST00000568219 PPP1R13BQ96KQ4 1090 aa12.6□□□□□ -0.39
PALB2-206ENST00000568219 CSB-PGBD3P0DP91 1061 aa12.6□□□□□ -0.39
PALB2-206ENST00000568219 SYKP43405 635 aa12.6□□□□□ -0.39
PALB2-206ENST00000568219 FANCCQ00597 558 aa12.6□□□□□ -0.39
PALB2-206ENST00000568219 CHMP4CQ96CF2 233 aa12.6□□□□□ -0.39
PALB2-206ENST00000568219 A0A0D9SFI3 127 aa12.59□□□□□ -0.39
PALB2-206ENST00000568219 DHX16O60231 1041 aaKnown RBP12.59□□□□□ -0.39
PALB2-206ENST00000568219 PIP4K2AP48426 406 aaPredicted RBP12.59□□□□□ -0.39
PALB2-206ENST00000568219 MRFAP1L1Q96HT8 127 aa12.59□□□□□ -0.39
PALB2-206ENST00000568219 HINFPQ9BQA5 517 aa12.59□□□□□ -0.39
PALB2-206ENST00000568219 RPAP1Q9BWH6 1393 aaPredicted RBP12.59□□□□□ -0.39
PALB2-206ENST00000568219 DNAJC21Q5F1R6 531 aaKnown RBP12.59□□□□□ -0.39
PALB2-206ENST00000568219 SEC62Q99442 399 aaKnown RBP12.59□□□□□ -0.39
PALB2-206ENST00000568219 NAP1L1P55209 391 aaKnown RBP12.59□□□□□ -0.39
PALB2-206ENST00000568219 SAFBQ15424 915 aaKnown RBP eCLIP12.59□□□□□ -0.39
PALB2-206ENST00000568219 TTC31Q49AM3 519 aaPredicted RBP12.59□□□□□ -0.39
PALB2-206ENST00000568219 JMYQ8N9B5 988 aa12.59□□□□□ -0.39
PALB2-206ENST00000568219 PUS7Q96PZ0 661 aaKnown RBP12.59□□□□□ -0.39
PALB2-206ENST00000568219 MAST1Q9Y2H9 1570 aa12.59□□□□□ -0.39
PALB2-206ENST00000568219 GOLGA8BA8MQT2 603 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 SPTLC2O15270 562 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 ADKP55263 362 aaKnown RBP12.58□□□□□ -0.4
PALB2-206ENST00000568219 DPCR1Q3MIW9 517 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 SMARCC1Q92922 1105 aaPredicted RBP12.58□□□□□ -0.4
PALB2-206ENST00000568219 CRACR2AQ9BSW2 395 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 STAP2Q9UGK3 403 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 E9PCH4 1651 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 ST5P78524 1137 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 SPECC1Q5M775 1068 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 FKBP15Q5T1M5 1219 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 GOLGA1Q92805 767 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 RXRAP19793 462 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 RBM6P78332 1123 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms