RNA–Protein interactions for RNA: ENST00000568190.1

SIN3A-209, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-209ENST00000568190 CRAMP1Q96RY5 1269 aa10.47□□□□□ -0.73
SIN3A-209ENST00000568190 CCDC88AQ3V6T2 1871 aa10.47□□□□□ -0.73
SIN3A-209ENST00000568190 MS4A1P11836 297 aa10.46□□□□□ -0.73
SIN3A-209ENST00000568190 ALDH1B1P30837 517 aa10.46□□□□□ -0.73
SIN3A-209ENST00000568190 CTSWP56202 376 aa10.46□□□□□ -0.73
SIN3A-209ENST00000568190 DALRD3Q5D0E6 543 aaKnown RBP10.46□□□□□ -0.73
SIN3A-209ENST00000568190 RPGRQ92834 1020 aaKnown RBP10.46□□□□□ -0.73
SIN3A-209ENST00000568190 USP44Q9H0E7 712 aa10.46□□□□□ -0.73
SIN3A-209ENST00000568190 C9orf78Q9NZ63 289 aaPredicted RBP10.46□□□□□ -0.73
SIN3A-209ENST00000568190 SUPT16HQ9Y5B9 1047 aaKnown RBP10.46□□□□□ -0.73
SIN3A-209ENST00000568190 SNED1Q8TER0 1413 aa10.46□□□□□ -0.74
SIN3A-209ENST00000568190 COL4A1P02462 1669 aa10.46□□□□□ -0.74
SIN3A-209ENST00000568190 YBX3P16989 372 aaKnown RBP eCLIP10.45□□□□□ -0.74
SIN3A-209ENST00000568190 CCDC152Q4G0S7 254 aa10.45□□□□□ -0.74
SIN3A-209ENST00000568190 PRPF40BQ6NWY9 871 aaKnown RBP10.45□□□□□ -0.74
SIN3A-209ENST00000568190 DZIP1LQ8IYY4 767 aaKnown RBP10.45□□□□□ -0.74
SIN3A-209ENST00000568190 RBM17Q96I25 401 aaKnown RBP10.45□□□□□ -0.74
SIN3A-209ENST00000568190 GRIN3BO60391 1043 aa10.44□□□□□ -0.74
SIN3A-209ENST00000568190 CSF1RP07333 972 aa10.44□□□□□ -0.74
SIN3A-209ENST00000568190 NBPF7P0C2Y1 421 aaPredicted RBP10.44□□□□□ -0.74
SIN3A-209ENST00000568190 FOXO4P98177 505 aa10.44□□□□□ -0.74
SIN3A-209ENST00000568190 PDE3AQ14432 1141 aa10.44□□□□□ -0.74
SIN3A-209ENST00000568190 RABL6Q3YEC7 729 aaPredicted RBP10.44□□□□□ -0.74
SIN3A-209ENST00000568190 RTL5Q5HYW3 569 aaPredicted RBP10.44□□□□□ -0.74
SIN3A-209ENST00000568190 SOGA3Q5TF21 947 aa10.44□□□□□ -0.74
SIN3A-209ENST00000568190 TMC4Q7Z404 712 aa10.44□□□□□ -0.74
SIN3A-209ENST00000568190 FTSJ3Q8IY81 847 aaKnown RBP10.44□□□□□ -0.74
SIN3A-209ENST00000568190 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.44□□□□□ -0.74
SIN3A-209ENST00000568190 TTLL11Q8NHH1 800 aa10.44□□□□□ -0.74
SIN3A-209ENST00000568190 C7orf43Q8WVR3 580 aa10.44□□□□□ -0.74
SIN3A-209ENST00000568190 HDAC5Q9UQL6 1122 aa10.44□□□□□ -0.74
SIN3A-209ENST00000568190 BBOX1O75936 387 aa10.43□□□□□ -0.74
SIN3A-209ENST00000568190 RLBP1P12271 317 aa10.43□□□□□ -0.74
SIN3A-209ENST00000568190 GRAPQ13588 217 aa10.43□□□□□ -0.74
SIN3A-209ENST00000568190 GRIPAP1Q4V328 841 aa10.43□□□□□ -0.74
SIN3A-209ENST00000568190 CC2D2BQ6DHV5 1058 aa10.43□□□□□ -0.74
SIN3A-209ENST00000568190 DDX46Q7L014 1031 aaKnown RBP10.43□□□□□ -0.74
SIN3A-209ENST00000568190 TMEM57Q8N5G2 664 aa10.43□□□□□ -0.74
SIN3A-209ENST00000568190 GRAPLQ8TC17 118 aaPredicted RBP10.43□□□□□ -0.74
SIN3A-209ENST00000568190 ZNF622Q969S3 477 aaKnown RBP eCLIP10.43□□□□□ -0.74
SIN3A-209ENST00000568190 KAZALD1Q96I82 304 aa10.43□□□□□ -0.74
SIN3A-209ENST00000568190 TNNQ9UQP3 1299 aa10.43□□□□□ -0.74
SIN3A-209ENST00000568190 TIAM2Q8IVF5 1701 aa10.42□□□□□ -0.74
SIN3A-209ENST00000568190 LTBP3Q9NS15 1303 aa10.42□□□□□ -0.74
SIN3A-209ENST00000568190 DCAF8L1A6NGE4 600 aa10.42□□□□□ -0.74
SIN3A-209ENST00000568190 GNAI3P08754 354 aa10.42□□□□□ -0.74
SIN3A-209ENST00000568190 UBTFL1P0CB47 393 aaPredicted RBP10.42□□□□□ -0.74
SIN3A-209ENST00000568190 GPR162Q16538 588 aa10.42□□□□□ -0.74
SIN3A-209ENST00000568190 JARID2Q92833 1246 aaPredicted RBP10.42□□□□□ -0.74
SIN3A-209ENST00000568190 CLUAP1Q96AJ1 413 aa10.42□□□□□ -0.74
SIN3A-209ENST00000568190 BCS1LQ9Y276 419 aa10.42□□□□□ -0.74
SIN3A-209ENST00000568190 DUOX1Q9NRD9 1551 aa10.42□□□□□ -0.74
SIN3A-209ENST00000568190 PPEF1O14829 653 aaPredicted RBP10.41□□□□□ -0.74
SIN3A-209ENST00000568190 EPHA10Q5JZY3 1008 aa10.41□□□□□ -0.74
SIN3A-209ENST00000568190 ANKRD44Q8N8A2 993 aa10.41□□□□□ -0.74
SIN3A-209ENST00000568190 SUCLG2Q96I99 432 aa10.41□□□□□ -0.74
SIN3A-209ENST00000568190 CDC5LQ99459 802 aaKnown RBP10.41□□□□□ -0.74
SIN3A-209ENST00000568190 MEIS3Q99687 375 aa10.41□□□□□ -0.74
SIN3A-209ENST00000568190 GREM2Q9H772 168 aa10.41□□□□□ -0.74
SIN3A-209ENST00000568190 ATP6V0A2Q9Y487 856 aa10.41□□□□□ -0.74
SIN3A-209ENST00000568190 RRP1P56182 461 aaKnown RBP10.4□□□□□ -0.74
SIN3A-209ENST00000568190 RPS8P62241 208 aaKnown RBP10.4□□□□□ -0.74
SIN3A-209ENST00000568190 MTX1Q13505 466 aa10.4□□□□□ -0.74
SIN3A-209ENST00000568190 MVPQ14764 893 aaKnown RBP10.4□□□□□ -0.74
SIN3A-209ENST00000568190 FAM161AQ3B820 660 aa10.4□□□□□ -0.74
SIN3A-209ENST00000568190 CCDC93Q567U6 631 aa10.4□□□□□ -0.74
SIN3A-209ENST00000568190 LMBR1LQ6UX01 489 aa10.4□□□□□ -0.74
SIN3A-209ENST00000568190 SP8Q8IXZ3 490 aa10.4□□□□□ -0.74
SIN3A-209ENST00000568190 RTKN2Q8IZC4 609 aa10.4□□□□□ -0.74
SIN3A-209ENST00000568190 BICC1Q9H694 974 aaKnown RBP10.4□□□□□ -0.74
SIN3A-209ENST00000568190 ZBTB7BO15156 539 aaPredicted RBP10.39□□□□□ -0.75
SIN3A-209ENST00000568190 C21orf2O43822 256 aa10.39□□□□□ -0.75
SIN3A-209ENST00000568190 ITGA6P23229 1130 aa10.39□□□□□ -0.75
SIN3A-209ENST00000568190 IFIT5Q13325 482 aaKnown RBP10.39□□□□□ -0.75
SIN3A-209ENST00000568190 ITPRIPQ8IWB1 547 aa10.39□□□□□ -0.75
SIN3A-209ENST00000568190 PANK1Q8TE04 598 aa10.39□□□□□ -0.75
SIN3A-209ENST00000568190 CELF1Q92879 486 aaKnown RBP10.39□□□□□ -0.75
SIN3A-209ENST00000568190 PSMD1Q99460 953 aa10.39□□□□□ -0.75
SIN3A-209ENST00000568190 CHMP4BQ9H444 224 aaKnown RBP10.39□□□□□ -0.75
SIN3A-209ENST00000568190 SEC31BQ9NQW1 1179 aa10.39□□□□□ -0.75
SIN3A-209ENST00000568190 BSDC1Q9NW68 430 aaPredicted RBP10.39□□□□□ -0.75
SIN3A-209ENST00000568190 DDX19BQ9UMR2 479 aa10.39□□□□□ -0.75
SIN3A-209ENST00000568190 PSME4Q14997 1843 aa10.39□□□□□ -0.75
SIN3A-209ENST00000568190 ANKRD18BA2A2Z9 1011 aa10.38□□□□□ -0.75
SIN3A-209ENST00000568190 NFKBIEO00221 500 aa10.38□□□□□ -0.75
SIN3A-209ENST00000568190 PLIN1O60240 522 aa10.38□□□□□ -0.75
SIN3A-209ENST00000568190 GNAI2P04899 355 aa10.38□□□□□ -0.75
SIN3A-209ENST00000568190 ANKRD18AQ8IVF6 992 aa10.38□□□□□ -0.75
SIN3A-209ENST00000568190 RTFDC1Q9BY42 306 aaPredicted RBP10.38□□□□□ -0.75
SIN3A-209ENST00000568190 PODXL2Q9NZ53 605 aa10.38□□□□□ -0.75
SIN3A-209ENST00000568190 LRRFIP2Q9Y608 721 aaKnown RBP10.38□□□□□ -0.75
SIN3A-209ENST00000568190 ZC3H4Q9UPT8 1303 aaKnown RBP10.37□□□□□ -0.75
SIN3A-209ENST00000568190 FKBP4Q02790 459 aaKnown RBP eCLIP10.37□□□□□ -0.751e-6■■■■■ 33.9
SIN3A-209ENST00000568190 CCDC57Q2TAC2 916 aa10.37□□□□□ -0.75
SIN3A-209ENST00000568190 C20orf194Q5TEA3 1177 aa10.37□□□□□ -0.75
SIN3A-209ENST00000568190 ARAP2Q8WZ64 1704 aa10.37□□□□□ -0.75
SIN3A-209ENST00000568190 TMX4Q9H1E5 349 aaPredicted RBP10.37□□□□□ -0.75
SIN3A-209ENST00000568190 VPS33BQ9H267 617 aa10.37□□□□□ -0.75
SIN3A-209ENST00000568190 TAOK3Q9H2K8 898 aa10.37□□□□□ -0.75
SIN3A-209ENST00000568190 ZBTB40Q9NUA8 1239 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms