RNA–Protein interactions for RNA: ENST00000568006.1

GBP3-211, Transcript of guanylate binding protein 3, humanhuman

TSL 5

Gene GBP3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-211ENST00000568006 G2E3Q7L622 706 aa9.47□□□□□ -0.89
GBP3-211ENST00000568006 ZNF784Q8NCA9 323 aaPredicted RBP9.47□□□□□ -0.89
GBP3-211ENST00000568006 ZNF622Q969S3 477 aaKnown RBP eCLIP9.47□□□□□ -0.89
GBP3-211ENST00000568006 METTL22Q9BUU2 404 aaPredicted RBP9.47□□□□□ -0.89
GBP3-211ENST00000568006 STK31Q9BXU1 1019 aa9.47□□□□□ -0.89
GBP3-211ENST00000568006 LTBP3Q9NS15 1303 aa9.47□□□□□ -0.89
GBP3-211ENST00000568006 LRRC37AA6NMS7 1700 aa9.47□□□□□ -0.89
GBP3-211ENST00000568006 TIAM2Q8IVF5 1701 aa9.47□□□□□ -0.89
GBP3-211ENST00000568006 NFKBIEO00221 500 aa9.46□□□□□ -0.9
GBP3-211ENST00000568006 NPHP1O15259 732 aa9.46□□□□□ -0.9
GBP3-211ENST00000568006 DDX58O95786 925 aaKnown RBP9.46□□□□□ -0.9
GBP3-211ENST00000568006 GTF2E1P29083 439 aaPredicted RBP9.46□□□□□ -0.9
GBP3-211ENST00000568006 PRELPP51888 382 aa9.46□□□□□ -0.9
GBP3-211ENST00000568006 FLIIQ13045 1269 aa9.46□□□□□ -0.9
GBP3-211ENST00000568006 PRPF40BQ6NWY9 871 aaKnown RBP9.46□□□□□ -0.9
GBP3-211ENST00000568006 RIC3Q7Z5B4 369 aa9.46□□□□□ -0.9
GBP3-211ENST00000568006 CCDC191Q8NCU4 936 aa9.46□□□□□ -0.9
GBP3-211ENST00000568006 SH3TC1Q8TE82 1336 aa9.46□□□□□ -0.9
GBP3-211ENST00000568006 CCDC88AQ3V6T2 1871 aa9.46□□□□□ -0.9
GBP3-211ENST00000568006 COL4A1P02462 1669 aa9.45□□□□□ -0.9
GBP3-211ENST00000568006 UTRNP46939 3433 aa9.45□□□□□ -0.9
GBP3-211ENST00000568006 PI4KAP2A4QPH2 592 aa9.45□□□□□ -0.9
GBP3-211ENST00000568006 ATP5J2-PTCD1G3V325 749 aa9.45□□□□□ -0.9
GBP3-211ENST00000568006 IGKV5-2P06315 115 aa9.45□□□□□ -0.9
GBP3-211ENST00000568006 ALDH1B1P30837 517 aa9.45□□□□□ -0.9
GBP3-211ENST00000568006 IRX6P78412 446 aaPredicted RBP9.45□□□□□ -0.9
GBP3-211ENST00000568006 ARHGAP27Q6ZUM4 889 aa9.45□□□□□ -0.9
GBP3-211ENST00000568006 SYNE4Q8N205 404 aa9.45□□□□□ -0.9
GBP3-211ENST00000568006 PI4KAP1Q8N8J0 262 aa9.45□□□□□ -0.9
GBP3-211ENST00000568006 CDCA7LQ96GN5 454 aa9.45□□□□□ -0.9
GBP3-211ENST00000568006 NLRP3Q96P20 1036 aa9.45□□□□□ -0.9
GBP3-211ENST00000568006 CRAMP1Q96RY5 1269 aa9.45□□□□□ -0.9
GBP3-211ENST00000568006 TRMT112Q9UI30 125 aaKnown RBP9.45□□□□□ -0.9
GBP3-211ENST00000568006 MAP3K2Q9Y2U5 619 aa9.45□□□□□ -0.9
GBP3-211ENST00000568006 C21orf2O43822 256 aa9.44□□□□□ -0.9
GBP3-211ENST00000568006 RASSF7Q02833 373 aa9.44□□□□□ -0.9
GBP3-211ENST00000568006 SF3B3Q15393 1217 aaKnown RBP9.44□□□□□ -0.9
GBP3-211ENST00000568006 SOGA3Q5TF21 947 aa9.44□□□□□ -0.9
GBP3-211ENST00000568006 ZBTB38Q8NAP3 1195 aaPredicted RBP9.44□□□□□ -0.9
GBP3-211ENST00000568006 ZNF428Q96B54 188 aa9.44□□□□□ -0.9
GBP3-211ENST00000568006 MYD88Q99836 296 aa9.44□□□□□ -0.9
GBP3-211ENST00000568006 ZC3H4Q9UPT8 1303 aaKnown RBP9.44□□□□□ -0.9
GBP3-211ENST00000568006 MYH3P11055 1940 aa9.43□□□□□ -0.9
GBP3-211ENST00000568006 TAF1P21675 1872 aa9.43□□□□□ -0.9
GBP3-211ENST00000568006 LTBP1Q14766 1721 aa9.43□□□□□ -0.9
GBP3-211ENST00000568006 CDHR2Q9BYE9 1310 aa9.43□□□□□ -0.9
GBP3-211ENST00000568006 PCCAP05165 728 aaPredicted RBP9.43□□□□□ -0.9
GBP3-211ENST00000568006 C9orf131Q5VYM1 1079 aa9.43□□□□□ -0.9
GBP3-211ENST00000568006 FAM89AQ96GI7 184 aa9.43□□□□□ -0.9
GBP3-211ENST00000568006 CWC25Q9NXE8 425 aaPredicted RBP9.43□□□□□ -0.9
GBP3-211ENST00000568006 ABCC4O15439 1325 aa9.42□□□□□ -0.9
GBP3-211ENST00000568006 NEURL1BA8MQ27 555 aa9.42□□□□□ -0.9
GBP3-211ENST00000568006 CT47B1P0C2W7 299 aaPredicted RBP9.42□□□□□ -0.9
GBP3-211ENST00000568006 HCLS1P14317 486 aaPredicted RBP9.42□□□□□ -0.9
GBP3-211ENST00000568006 LMNB1P20700 586 aa9.42□□□□□ -0.9
GBP3-211ENST00000568006 CCDC93Q567U6 631 aa9.42□□□□□ -0.9
GBP3-211ENST00000568006 CC2D2BQ6DHV5 1058 aa9.42□□□□□ -0.9
GBP3-211ENST00000568006 MRPL50Q8N5N7 158 aaKnown RBP9.42□□□□□ -0.9
GBP3-211ENST00000568006 DNAAF4Q8WXU2 420 aa9.42□□□□□ -0.9
GBP3-211ENST00000568006 RPGRQ92834 1020 aaKnown RBP9.42□□□□□ -0.9
GBP3-211ENST00000568006 RBM17Q96I25 401 aaKnown RBP9.42□□□□□ -0.9
GBP3-211ENST00000568006 DUOX1Q9NRD9 1551 aa9.41□□□□□ -0.9
GBP3-211ENST00000568006 H7C1W4 665 aa9.41□□□□□ -0.9
GBP3-211ENST00000568006 IRS4O14654 1257 aaPredicted RBP9.41□□□□□ -0.9
GBP3-211ENST00000568006 BRPF1P55201 1214 aaPredicted RBP9.41□□□□□ -0.9
GBP3-211ENST00000568006 CASP7P55210 303 aa9.41□□□□□ -0.9
GBP3-211ENST00000568006 FKBP4Q02790 459 aaKnown RBP eCLIP9.41□□□□□ -0.9
GBP3-211ENST00000568006 FKBP5Q13451 457 aaPredicted RBP9.41□□□□□ -0.9
GBP3-211ENST00000568006 GRAPQ13588 217 aa9.41□□□□□ -0.9
GBP3-211ENST00000568006 CWF19L2Q2TBE0 894 aaKnown RBP9.41□□□□□ -0.9
GBP3-211ENST00000568006 ALDH1L2Q3SY69 923 aa9.41□□□□□ -0.9
GBP3-211ENST00000568006 GRIPAP1Q4V328 841 aa9.41□□□□□ -0.9
GBP3-211ENST00000568006 BEND3Q5T5X7 828 aa9.41□□□□□ -0.9
GBP3-211ENST00000568006 OLFM4Q6UX06 510 aa9.41□□□□□ -0.9
GBP3-211ENST00000568006 LINS1Q8NG48 757 aa9.41□□□□□ -0.9
GBP3-211ENST00000568006 GRAPLQ8TC17 118 aaPredicted RBP9.41□□□□□ -0.9
GBP3-211ENST00000568006 PSMD1Q99460 953 aa9.41□□□□□ -0.9
GBP3-211ENST00000568006 TAOK3Q9H2K8 898 aa9.41□□□□□ -0.9
GBP3-211ENST00000568006 WDR90Q96KV7 1748 aa9.41□□□□□ -0.9
GBP3-211ENST00000568006 RTL9Q8NET4 1388 aa9.4□□□□□ -0.9
GBP3-211ENST00000568006 COL4A5P29400 1685 aa9.4□□□□□ -0.9
GBP3-211ENST00000568006 PPEF1O14829 653 aaPredicted RBP9.4□□□□□ -0.9
GBP3-211ENST00000568006 PDE8AO60658 829 aa9.4□□□□□ -0.9
GBP3-211ENST00000568006 BBOX1O75936 387 aa9.4□□□□□ -0.9
GBP3-211ENST00000568006 MNX1P50219 401 aaPredicted RBP9.4□□□□□ -0.9
GBP3-211ENST00000568006 NEXNQ0ZGT2 675 aa9.4□□□□□ -0.9
GBP3-211ENST00000568006 GCKRQ14397 625 aa9.4□□□□□ -0.9
GBP3-211ENST00000568006 SLC51AQ86UW1 340 aa9.4□□□□□ -0.9
GBP3-211ENST00000568006 IFNLR1Q8IU57 520 aaPredicted RBP9.4□□□□□ -0.9
GBP3-211ENST00000568006 RTKN2Q8IZC4 609 aa9.4□□□□□ -0.9
GBP3-211ENST00000568006 SSH1Q8WYL5 1049 aa9.4□□□□□ -0.9
GBP3-211ENST00000568006 PLA2G12BQ9BX93 195 aa9.4□□□□□ -0.9
GBP3-211ENST00000568006 RNF181Q9P0P0 153 aa9.4□□□□□ -0.9
GBP3-211ENST00000568006 ATP6V0A2Q9Y487 856 aa9.4□□□□□ -0.9
GBP3-211ENST00000568006 GOLGB1Q14789 3259 aaKnown RBP9.4□□□□□ -0.9
GBP3-211ENST00000568006 PTPRCP08575 1304 aa9.39□□□□□ -0.91
GBP3-211ENST00000568006 F6X3S4 739 aa9.39□□□□□ -0.91
GBP3-211ENST00000568006 GABBR2O75899 941 aa9.39□□□□□ -0.91
GBP3-211ENST00000568006 HSP90B1P14625 803 aaKnown RBP9.39□□□□□ -0.91
GBP3-211ENST00000568006 GSE1Q14687 1217 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms