RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 JARID2Q92833 1246 aaPredicted RBP9.21□□□□□ -0.94
SMPD3-210ENST00000567811 SPINK5Q9NQ38 1064 aaPredicted RBP9.21□□□□□ -0.94
SMPD3-210ENST00000567811 CWC25Q9NXE8 425 aaPredicted RBP9.21□□□□□ -0.94
SMPD3-210ENST00000567811 ABCC4O15439 1325 aa9.21□□□□□ -0.94
SMPD3-210ENST00000567811 TIAM2Q8IVF5 1701 aa9.2□□□□□ -0.94
SMPD3-210ENST00000567811 SCN4AP35499 1836 aa9.2□□□□□ -0.94
SMPD3-210ENST00000567811 PDE8AO60658 829 aa9.2□□□□□ -0.94
SMPD3-210ENST00000567811 APLP1P51693 650 aa9.2□□□□□ -0.94
SMPD3-210ENST00000567811 EIF6P56537 245 aaKnown RBP9.2□□□□□ -0.94
SMPD3-210ENST00000567811 LARGE2Q8N3Y3 721 aa9.2□□□□□ -0.94
SMPD3-210ENST00000567811 SMC1BQ8NDV3 1235 aa9.2□□□□□ -0.94
SMPD3-210ENST00000567811 FANCIQ9NVI1 1328 aa9.2□□□□□ -0.94
SMPD3-210ENST00000567811 DDX60Q8IY21 1712 aaKnown RBP9.19□□□□□ -0.94
SMPD3-210ENST00000567811 WDR90Q96KV7 1748 aa9.19□□□□□ -0.94
SMPD3-210ENST00000567811 IQCA1LA6NCM1 817 aa9.19□□□□□ -0.94
SMPD3-210ENST00000567811 CCER2I3L3R5 266 aa9.19□□□□□ -0.94
SMPD3-210ENST00000567811 IGKV5-2P06315 115 aa9.19□□□□□ -0.94
SMPD3-210ENST00000567811 DPP8Q6V1X1 898 aaPredicted RBP9.19□□□□□ -0.94
SMPD3-210ENST00000567811 GPC2Q8N158 579 aa9.19□□□□□ -0.94
SMPD3-210ENST00000567811 CELF1Q92879 486 aaKnown RBP9.19□□□□□ -0.94
SMPD3-210ENST00000567811 RTFDC1Q9BY42 306 aaPredicted RBP9.19□□□□□ -0.94
SMPD3-210ENST00000567811 NSFL1CQ9UNZ2 370 aaKnown RBP9.19□□□□□ -0.94
SMPD3-210ENST00000567811 H7C1W4 665 aa9.18□□□□□ -0.94
SMPD3-210ENST00000567811 PPIP5K2O43314 1243 aa9.18□□□□□ -0.94
SMPD3-210ENST00000567811 MYH3P11055 1940 aa9.18□□□□□ -0.94
SMPD3-210ENST00000567811 FLIIQ13045 1269 aa9.18□□□□□ -0.94
SMPD3-210ENST00000567811 FKBP5Q13451 457 aaPredicted RBP9.18□□□□□ -0.94
SMPD3-210ENST00000567811 CCDC152Q4G0S7 254 aa9.18□□□□□ -0.94
SMPD3-210ENST00000567811 NIM1KQ8IY84 436 aa9.18□□□□□ -0.94
SMPD3-210ENST00000567811 L3MBTL3Q96JM7 780 aaPredicted RBP9.18□□□□□ -0.94
SMPD3-210ENST00000567811 GJA3Q9Y6H8 435 aa9.18□□□□□ -0.94
SMPD3-210ENST00000567811 POLR2AP24928 1970 aaKnown RBP9.17□□□□□ -0.94
SMPD3-210ENST00000567811 NEURL1BA8MQ27 555 aa9.17□□□□□ -0.94
SMPD3-210ENST00000567811 AOC3Q16853 763 aa9.17□□□□□ -0.94
SMPD3-210ENST00000567811 WASHC4Q2M389 1173 aa9.17□□□□□ -0.94
SMPD3-210ENST00000567811 CWF19L2Q2TBE0 894 aaKnown RBP9.17□□□□□ -0.94
SMPD3-210ENST00000567811 DNAAF4Q8WXU2 420 aa9.17□□□□□ -0.94
SMPD3-210ENST00000567811 TAF1DQ9H5J8 278 aaPredicted RBP9.17□□□□□ -0.94
SMPD3-210ENST00000567811 SEC31BQ9NQW1 1179 aa9.17□□□□□ -0.94
SMPD3-210ENST00000567811 HACL1Q9UJ83 578 aa9.17□□□□□ -0.94
SMPD3-210ENST00000567811 ZNRF3Q9ULT6 936 aa9.17□□□□□ -0.94
SMPD3-210ENST00000567811 CLEC11AQ9Y240 323 aa9.17□□□□□ -0.94
SMPD3-210ENST00000567811 SNED1Q8TER0 1413 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 ZNF521Q96K83 1311 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 CDHR2Q9BYE9 1310 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 ZNF541Q9H0D2 1346 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 E9PSI1 815 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 C6orf229H3BNL8 230 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 CXCL9Q07325 125 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 SLFN5Q08AF3 891 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 KIAA2012Q0VF49 1180 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 GCKRQ14397 625 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 CHADLQ6NUI6 762 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 SLC51AQ86UW1 340 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 PNMA8AQ86V59 439 aaPredicted RBP9.16□□□□□ -0.94
SMPD3-210ENST00000567811 DNAJC5GQ8N7S2 189 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 LINS1Q8NG48 757 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 TTLL11Q8NHH1 800 aa9.16□□□□□ -0.94
SMPD3-210ENST00000567811 CCDC85AQ96PX6 553 aaPredicted RBP9.16□□□□□ -0.94
SMPD3-210ENST00000567811 RIMBP2O15034 1052 aa9.15□□□□□ -0.94
SMPD3-210ENST00000567811 LMOD1P29536 600 aaPredicted RBP9.15□□□□□ -0.94
SMPD3-210ENST00000567811 EPHX2P34913 555 aa9.15□□□□□ -0.94
SMPD3-210ENST00000567811 GPSM2P81274 684 aa9.15□□□□□ -0.94
SMPD3-210ENST00000567811 TNIP1Q15025 636 aa9.15□□□□□ -0.94
SMPD3-210ENST00000567811 EAPPQ56P03 285 aaPredicted RBP9.15□□□□□ -0.94
SMPD3-210ENST00000567811 UBE3BQ7Z3V4 1068 aa9.15□□□□□ -0.94
SMPD3-210ENST00000567811 ANKRD18AQ8IVF6 992 aa9.15□□□□□ -0.94
SMPD3-210ENST00000567811 ZC3H12CQ9C0D7 883 aaKnown RBP9.15□□□□□ -0.94
SMPD3-210ENST00000567811 ANKIB1Q9P2G1 1089 aa9.15□□□□□ -0.94
SMPD3-210ENST00000567811 POLLQ9UGP5 575 aa9.15□□□□□ -0.94
SMPD3-210ENST00000567811 F6X3S4 739 aa9.14□□□□□ -0.95
SMPD3-210ENST00000567811 G3V3G9 751 aa9.14□□□□□ -0.95
SMPD3-210ENST00000567811 CSF1RP07333 972 aa9.14□□□□□ -0.95
SMPD3-210ENST00000567811 POTEIP0CG38 1075 aa9.14□□□□□ -0.95
SMPD3-210ENST00000567811 POTEJP0CG39 1038 aa9.14□□□□□ -0.95
SMPD3-210ENST00000567811 EPS15P42566 896 aa9.14□□□□□ -0.95
SMPD3-210ENST00000567811 BEND3Q5T5X7 828 aa9.14□□□□□ -0.95
SMPD3-210ENST00000567811 DCAF8Q5TAQ9 597 aa9.14□□□□□ -0.95
SMPD3-210ENST00000567811 CIAPIN1Q6FI81 312 aa9.14□□□□□ -0.95
SMPD3-210ENST00000567811 LDHDQ86WU2 507 aa9.14□□□□□ -0.95
SMPD3-210ENST00000567811 TBC1D16Q8TBP0 767 aa9.14□□□□□ -0.95
SMPD3-210ENST00000567811 CDC5LQ99459 802 aaKnown RBP9.14□□□□□ -0.95
SMPD3-210ENST00000567811 EYA3Q99504 573 aa9.14□□□□□ -0.95
SMPD3-210ENST00000567811 PLA2G12BQ9BX93 195 aa9.14□□□□□ -0.95
SMPD3-210ENST00000567811 PODXL2Q9NZ53 605 aa9.14□□□□□ -0.95
SMPD3-210ENST00000567811 RAD17O75943 681 aa9.13□□□□□ -0.95
SMPD3-210ENST00000567811 CTSWP56202 376 aa9.13□□□□□ -0.95
SMPD3-210ENST00000567811 HTRA3P83110 453 aa9.13□□□□□ -0.95
SMPD3-210ENST00000567811 DIEXFQ68CQ4 756 aaKnown RBP9.13□□□□□ -0.95
SMPD3-210ENST00000567811 TRMT2AQ8IZ69 625 aaKnown RBP9.13□□□□□ -0.95
SMPD3-210ENST00000567811 CNTROBQ8N137 903 aa9.13□□□□□ -0.95
SMPD3-210ENST00000567811 CDCA7LQ96GN5 454 aa9.13□□□□□ -0.95
SMPD3-210ENST00000567811 BCL2L13Q9BXK5 485 aa9.13□□□□□ -0.95
SMPD3-210ENST00000567811 GREM2Q9H772 168 aa9.13□□□□□ -0.95
SMPD3-210ENST00000567811 BSDC1Q9NW68 430 aaPredicted RBP9.13□□□□□ -0.95
SMPD3-210ENST00000567811 ALDH1L1O75891 902 aa9.12□□□□□ -0.95
SMPD3-210ENST00000567811 ITGBL1O95965 494 aaPredicted RBP9.12□□□□□ -0.95
SMPD3-210ENST00000567811 ATP2B4P23634 1241 aa9.12□□□□□ -0.95
SMPD3-210ENST00000567811 SCNN1DP51172 638 aa9.12□□□□□ -0.95
SMPD3-210ENST00000567811 CASP7P55210 303 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms