RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 EYA2O00167 538 aa13.27□□□□□ -0.29
VPS9D1-206ENST00000567379 PDE8AO60658 829 aa13.27□□□□□ -0.29
VPS9D1-206ENST00000567379 CIAO1O76071 339 aa13.27□□□□□ -0.29
VPS9D1-206ENST00000567379 HMGB2P26583 209 aaKnown RBP13.27□□□□□ -0.29
VPS9D1-206ENST00000567379 TAF7LQ5H9L4 462 aa13.27□□□□□ -0.29
VPS9D1-206ENST00000567379 PI4K2BQ8TCG2 481 aa13.27□□□□□ -0.29
VPS9D1-206ENST00000567379 DAXXQ9UER7 740 aaPredicted RBP13.27□□□□□ -0.29
VPS9D1-206ENST00000567379 NIP7Q9Y221 180 aaKnown RBP eCLIP13.27□□□□□ -0.29
VPS9D1-206ENST00000567379 UBN2Q6ZU65 1347 aa13.27□□□□□ -0.29
VPS9D1-206ENST00000567379 AK9Q5TCS8 1911 aa13.27□□□□□ -0.29
VPS9D1-206ENST00000567379 CTSWP56202 376 aa13.26□□□□□ -0.29
VPS9D1-206ENST00000567379 KCNQ4P56696 695 aa13.26□□□□□ -0.29
VPS9D1-206ENST00000567379 TFCP2Q12800 502 aa13.26□□□□□ -0.29
VPS9D1-206ENST00000567379 IFIT5Q13325 482 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-206ENST00000567379 TAF1LQ8IZX4 1826 aa13.26□□□□□ -0.29
VPS9D1-206ENST00000567379 CNTROBQ8N137 903 aa13.26□□□□□ -0.29
VPS9D1-206ENST00000567379 SH3TC1Q8TE82 1336 aa13.26□□□□□ -0.29
VPS9D1-206ENST00000567379 EAF2Q96CJ1 260 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-206ENST00000567379 CCDC8Q9H0W5 538 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-206ENST00000567379 GPR108Q9NPR9 543 aa13.26□□□□□ -0.29
VPS9D1-206ENST00000567379 RTCBQ9Y3I0 505 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-206ENST00000567379 GNPATO15228 680 aa13.25□□□□□ -0.29
VPS9D1-206ENST00000567379 TNNI3KQ59H18 835 aa13.25□□□□□ -0.29
VPS9D1-206ENST00000567379 SUSD4Q5VX71 490 aa13.25□□□□□ -0.29
VPS9D1-206ENST00000567379 ERICH6Q7L0X2 663 aa13.25□□□□□ -0.29
VPS9D1-206ENST00000567379 TTLL11Q8NHH1 800 aa13.25□□□□□ -0.29
VPS9D1-206ENST00000567379 SPON1Q9HCB6 807 aa13.25□□□□□ -0.29
VPS9D1-206ENST00000567379 FPGT-TNNI3KV9GXZ4 949 aa13.25□□□□□ -0.29
VPS9D1-206ENST00000567379 ANKRD18BA2A2Z9 1011 aa13.24□□□□□ -0.29
VPS9D1-206ENST00000567379 ZPR1O75312 459 aa13.24□□□□□ -0.29
VPS9D1-206ENST00000567379 REC8O95072 547 aa13.24□□□□□ -0.29
VPS9D1-206ENST00000567379 RBM25P49756 843 aaKnown RBP13.24□□□□□ -0.29
VPS9D1-206ENST00000567379 BECN1Q14457 450 aa13.24□□□□□ -0.29
VPS9D1-206ENST00000567379 EZH2Q15910 746 aaKnown RBP13.24□□□□□ -0.29
VPS9D1-206ENST00000567379 ATG9AQ7Z3C6 839 aa13.24□□□□□ -0.29
VPS9D1-206ENST00000567379 SYNE4Q8N205 404 aa13.24□□□□□ -0.29
VPS9D1-206ENST00000567379 ZNF594Q96JF6 807 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-206ENST00000567379 CEP126Q9P2H0 1117 aa13.24□□□□□ -0.29
VPS9D1-206ENST00000567379 NARFQ9UHQ1 456 aa13.24□□□□□ -0.29
VPS9D1-206ENST00000567379 SCN7AQ01118 1682 aa13.24□□□□□ -0.29
VPS9D1-206ENST00000567379 C4BP0C0L5 1744 aa13.23□□□□□ -0.29
VPS9D1-206ENST00000567379 FAM177BA6PVY3 158 aa13.23□□□□□ -0.29
VPS9D1-206ENST00000567379 MSH5O43196 834 aa13.23□□□□□ -0.29
VPS9D1-206ENST00000567379 CHMLP26374 656 aa13.23□□□□□ -0.29
VPS9D1-206ENST00000567379 SLC27A3Q5K4L6 730 aa13.23□□□□□ -0.29
VPS9D1-206ENST00000567379 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.23□□□□□ -0.29
VPS9D1-206ENST00000567379 TRIM37O94972 964 aa13.22□□□□□ -0.29
VPS9D1-206ENST00000567379 NTSR2O95665 410 aa13.22□□□□□ -0.29
VPS9D1-206ENST00000567379 MAP4K4O95819 1239 aaPredicted RBP13.22□□□□□ -0.29
VPS9D1-206ENST00000567379 ITGA6P23229 1130 aa13.22□□□□□ -0.29
VPS9D1-206ENST00000567379 LRRC24Q50LG9 513 aa13.22□□□□□ -0.29
VPS9D1-206ENST00000567379 EVI5LQ96CN4 794 aa13.22□□□□□ -0.29
VPS9D1-206ENST00000567379 CCDC85AQ96PX6 553 aaPredicted RBP13.22□□□□□ -0.29
VPS9D1-206ENST00000567379 ESYT1Q9BSJ8 1104 aa13.22□□□□□ -0.29
VPS9D1-206ENST00000567379 GREM2Q9H772 168 aa13.22□□□□□ -0.29
VPS9D1-206ENST00000567379 AKAP2Q9Y2D5 859 aa13.22□□□□□ -0.29
VPS9D1-206ENST00000567379 LAMB2P55268 1798 aa13.22□□□□□ -0.29
VPS9D1-206ENST00000567379 CHD4Q14839 1912 aa13.21□□□□□ -0.29
VPS9D1-206ENST00000567379 HCLS1P14317 486 aaPredicted RBP13.21□□□□□ -0.29
VPS9D1-206ENST00000567379 ADRA2BP18089 450 aa13.21□□□□□ -0.29
VPS9D1-206ENST00000567379 ATP5JP18859 108 aa13.21□□□□□ -0.29
VPS9D1-206ENST00000567379 CCDC152Q4G0S7 254 aa13.21□□□□□ -0.29
VPS9D1-206ENST00000567379 TRAPPC3LQ5T215 181 aa13.21□□□□□ -0.29
VPS9D1-206ENST00000567379 USPL1Q5W0Q7 1092 aa13.21□□□□□ -0.29
VPS9D1-206ENST00000567379 NEUROD6Q96NK8 337 aa13.21□□□□□ -0.29
VPS9D1-206ENST00000567379 CAMKK2Q96RR4 588 aa13.21□□□□□ -0.29
VPS9D1-206ENST00000567379 USP26Q9BXU7 913 aa13.21□□□□□ -0.29
VPS9D1-206ENST00000567379 PUS3Q9BZE2 481 aaKnown RBP13.21□□□□□ -0.29
VPS9D1-206ENST00000567379 NYXQ9GZU5 481 aa13.21□□□□□ -0.29
VPS9D1-206ENST00000567379 TLR7Q9NYK1 1049 aaKnown RBP13.21□□□□□ -0.29
VPS9D1-206ENST00000567379 HIP1O00291 1037 aa13.2□□□□□ -0.3
VPS9D1-206ENST00000567379 RFC4P35249 363 aa13.2□□□□□ -0.3
VPS9D1-206ENST00000567379 LDHAL6AQ6ZMR3 332 aa13.2□□□□□ -0.3
VPS9D1-206ENST00000567379 RUFY2Q8WXA3 655 aa13.2□□□□□ -0.3
VPS9D1-206ENST00000567379 ARHGEF1Q92888 912 aaKnown RBP13.2□□□□□ -0.3
VPS9D1-206ENST00000567379 SETDB2Q96T68 719 aa13.2□□□□□ -0.3
VPS9D1-206ENST00000567379 CNNM1Q9NRU3 951 aa13.2□□□□□ -0.3
VPS9D1-206ENST00000567379 DBNLQ9UJU6 430 aaKnown RBP13.2□□□□□ -0.3
VPS9D1-206ENST00000567379 ZNF609O15014 1411 aa13.2□□□□□ -0.3
VPS9D1-206ENST00000567379 DDX60Q8IY21 1712 aaKnown RBP13.19□□□□□ -0.3
VPS9D1-206ENST00000567379 GTF2E1P29083 439 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-206ENST00000567379 METTL24Q5JXM2 366 aa13.19□□□□□ -0.3
VPS9D1-206ENST00000567379 BICDL1Q6ZP65 573 aa13.19□□□□□ -0.3
VPS9D1-206ENST00000567379 DBNDD2Q9BQY9 259 aa13.19□□□□□ -0.3
VPS9D1-206ENST00000567379 BOLA2Q9H3K6 86 aa13.19□□□□□ -0.3
VPS9D1-206ENST00000567379 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
VPS9D1-206ENST00000567379 DIAPH3Q9NSV4 1193 aa13.19□□□□□ -0.3
VPS9D1-206ENST00000567379 SRP68Q9UHB9 627 aaKnown RBP13.19□□□□□ -0.3
VPS9D1-206ENST00000567379 RTL9Q8NET4 1388 aa13.19□□□□□ -0.3
VPS9D1-206ENST00000567379 EPB41L2O43491 1005 aaKnown RBP13.18□□□□□ -0.3
VPS9D1-206ENST00000567379 MCCP23508 829 aa13.18□□□□□ -0.3
VPS9D1-206ENST00000567379 TBC1D9BQ66K14 1250 aa13.18□□□□□ -0.3
VPS9D1-206ENST00000567379 LRRC4BQ9NT99 713 aa13.18□□□□□ -0.3
VPS9D1-206ENST00000567379 RIPOR2Q9Y4F9 1068 aa13.18□□□□□ -0.3
VPS9D1-206ENST00000567379 CEP350Q5VT06 3117 aa13.18□□□□□ -0.3
VPS9D1-206ENST00000567379 A0A1B0GUL7 405 aa13.17□□□□□ -0.3
VPS9D1-206ENST00000567379 PHF14O94880 888 aa13.17□□□□□ -0.3
VPS9D1-206ENST00000567379 TIMM10P62072 90 aa13.17□□□□□ -0.3
VPS9D1-206ENST00000567379 ERFEQ4G0M1 354 aa13.17□□□□□ -0.3
VPS9D1-206ENST00000567379 SLC10A5Q5PT55 438 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms