RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 EIF5P55010 431 aaKnown RBP7.2□□□□□ -1.26
CDH13-209ENST00000567109 BIRC2Q13490 618 aa7.2□□□□□ -1.26
CDH13-209ENST00000567109 PLS1Q14651 629 aa7.2□□□□□ -1.26
CDH13-209ENST00000567109 SMC1AQ14683 1233 aaKnown RBP7.2□□□□□ -1.26
CDH13-209ENST00000567109 FAM177A1Q8N128 213 aaPredicted RBP7.2□□□□□ -1.26
CDH13-209ENST00000567109 USHBP1Q8N6Y0 703 aa7.2□□□□□ -1.26
CDH13-209ENST00000567109 CCDC113Q9H0I3 377 aa7.2□□□□□ -1.26
CDH13-209ENST00000567109 USP21Q9UK80 565 aa7.2□□□□□ -1.26
CDH13-209ENST00000567109 ERBB4Q15303 1308 aa7.2□□□□□ -1.26
CDH13-209ENST00000567109 IDH1O75874 414 aaKnown RBP7.2□□□□□ -1.26
CDH13-209ENST00000567109 ATF7IPQ6VMQ6 1270 aa7.2□□□□□ -1.26
CDH13-209ENST00000567109 ARHGAP45Q92619 1136 aa7.2□□□□□ -1.26
CDH13-209ENST00000567109 POLR3GO15318 223 aaPredicted RBP7.2□□□□□ -1.26
CDH13-209ENST00000567109 SH3BP5O60239 455 aa7.2□□□□□ -1.26
CDH13-209ENST00000567109 MAP4K4O95819 1239 aaPredicted RBP7.2□□□□□ -1.26
CDH13-209ENST00000567109 UNC5CLQ8IV45 518 aa7.2□□□□□ -1.26
CDH13-209ENST00000567109 WASF1Q92558 559 aa7.2□□□□□ -1.26
CDH13-209ENST00000567109 TAF4BQ92750 862 aa7.2□□□□□ -1.26
CDH13-209ENST00000567109 CDC45O75419 566 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 ERLIN1O75477 346 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 MTHFSDQ2M296 383 aaKnown RBP7.19□□□□□ -1.26
CDH13-209ENST00000567109 DBF4Q9UBU7 674 aaPredicted RBP7.19□□□□□ -1.26
CDH13-209ENST00000567109 MAP3K5Q99683 1374 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 IGSF1Q8N6C5 1336 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 FGFR1OPO95684 399 aaKnown RBP7.19□□□□□ -1.26
CDH13-209ENST00000567109 AIDAQ96BJ3 306 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 CARD10Q9BWT7 1032 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 SYCP3Q8IZU3 236 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 RAB34Q9BZG1 259 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 C6orf229H3BNL8 230 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 RFC4P35249 363 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 VPS36Q86VN1 386 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 EXOC6Q8TAG9 804 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 BICD1Q96G01 975 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 CCDC85AQ96PX6 553 aaPredicted RBP7.19□□□□□ -1.26
CDH13-209ENST00000567109 TRMT1LQ7Z2T5 733 aaKnown RBP7.19□□□□□ -1.26
CDH13-209ENST00000567109 RPAP2Q8IXW5 612 aaPredicted RBP7.19□□□□□ -1.26
CDH13-209ENST00000567109 OTUD6BQ8N6M0 293 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 SPC24Q8NBT2 197 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 TULP4Q9NRJ4 1543 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 BAG6P46379 1132 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 SMAP1Q8IYB5 467 aaPredicted RBP7.19□□□□□ -1.26
CDH13-209ENST00000567109 RAB3IL1Q8TBN0 382 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 ZNF526Q8TF50 670 aaPredicted RBP7.19□□□□□ -1.26
CDH13-209ENST00000567109 SYNCQ9H7C4 482 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 USP19O94966 1318 aa7.19□□□□□ -1.26
CDH13-209ENST00000567109 WDR33Q9C0J8 1336 aaKnown RBP7.19□□□□□ -1.26
CDH13-209ENST00000567109 ALDH1L1O75891 902 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 AEBP1Q8IUX7 1158 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 ODF2LQ9ULJ1 636 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 A6NNZ2 444 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 TUBB8Q3ZCM7 444 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 NBPF6Q5VWK0 638 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 DDX11Q96FC9 970 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 NBPF4Q96M43 638 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 LRRCC1Q9C099 1032 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 ABCA6Q8N139 1617 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 TMEM266Q2M3C6 531 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 PRC1O43663 620 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 CTNNA3Q9UI47 895 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 CBFA2T2O43439 604 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 BAG4O95429 457 aaKnown RBP7.18□□□□□ -1.26
CDH13-209ENST00000567109 LMOD1P29536 600 aaPredicted RBP7.18□□□□□ -1.26
CDH13-209ENST00000567109 MPRIPQ6WCQ1 1025 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 CEP126Q9P2H0 1117 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 CGNQ9P2M7 1197 aaKnown RBP7.18□□□□□ -1.26
CDH13-209ENST00000567109 CYP46A1Q9Y6A2 500 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 RNF17Q9BXT8 1623 aaKnown RBP7.18□□□□□ -1.26
CDH13-209ENST00000567109 GOLGA6L9A6NEM1 432 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 RNMTO43148 476 aaKnown RBP7.18□□□□□ -1.26
CDH13-209ENST00000567109 NLRP5P59047 1200 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 CETN1Q12798 172 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 UBE4AQ14139 1066 aa7.18□□□□□ -1.26
CDH13-209ENST00000567109 CCDC117Q8IWD4 279 aaPredicted RBP7.18□□□□□ -1.26
CDH13-209ENST00000567109 ERVV-2B6SEH9 535 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 SLC4A2P04920 1241 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 CCDC192P0DO97 292 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 CACNA2D4Q7Z3S7 1137 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 SREK1Q8WXA9 508 aaKnown RBP7.17□□□□□ -1.26
CDH13-209ENST00000567109 CFAP45Q9UL16 551 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 ERBB3P21860 1342 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 KMT5BQ4FZB7 885 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.17□□□□□ -1.26
CDH13-209ENST00000567109 HYPKQ9NX55 129 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 IMMTQ16891 758 aaKnown RBP7.17□□□□□ -1.26
CDH13-209ENST00000567109 DUSP27Q5VZP5 1158 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 TSPY26PQ9H489 355 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 STK32BQ9NY57 414 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 V9GYY5 206 aaPredicted RBP7.17□□□□□ -1.26
CDH13-209ENST00000567109 SOS2Q07890 1332 aaPredicted RBP7.17□□□□□ -1.26
CDH13-209ENST00000567109 POTEB2H3BUK9 544 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 CCDC178Q5BJE1 867 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 PAXBP1Q9Y5B6 917 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 TNMDQ9H2S6 317 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 AKAP2Q9Y2D5 859 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 HLA-DOAP06340 250 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 AACSQ86V21 672 aa7.17□□□□□ -1.26
CDH13-209ENST00000567109 BCCIPQ9P287 314 aaKnown RBP eCLIP7.17□□□□□ -1.26
CDH13-209ENST00000567109 NOC2LQ9Y3T9 749 aaKnown RBP7.17□□□□□ -1.26
CDH13-209ENST00000567109 MCM10Q7L590 875 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms