RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 XAGE3Q8WTP9 111 aa20.38■□□□□ 0.85
PALB2-205ENST00000567003 RTFDC1Q9BY42 306 aaPredicted RBP20.38■□□□□ 0.85
PALB2-205ENST00000567003 RIPK4P57078 832 aa20.37■□□□□ 0.85
PALB2-205ENST00000567003 FAM161AQ3B820 660 aa20.37■□□□□ 0.85
PALB2-205ENST00000567003 COPS6Q7L5N1 327 aa20.37■□□□□ 0.85
PALB2-205ENST00000567003 NLRP10Q86W26 655 aa20.37■□□□□ 0.85
PALB2-205ENST00000567003 BEGAINQ9BUH8 593 aa20.37■□□□□ 0.85
PALB2-205ENST00000567003 ZNF408Q9H9D4 720 aa20.37■□□□□ 0.85
PALB2-205ENST00000567003 DUOX1Q9NRD9 1551 aa20.37■□□□□ 0.85
PALB2-205ENST00000567003 HIRAP54198 1017 aaPredicted RBP20.36■□□□□ 0.85
PALB2-205ENST00000567003 KRT24Q2M2I5 525 aa20.36■□□□□ 0.85
PALB2-205ENST00000567003 CIAPIN1Q6FI81 312 aa20.36■□□□□ 0.85
PALB2-205ENST00000567003 SP8Q8IXZ3 490 aa20.36■□□□□ 0.85
PALB2-205ENST00000567003 MPNDQ8N594 471 aa20.36■□□□□ 0.85
PALB2-205ENST00000567003 SUPT20HQ8NEM7 779 aa20.36■□□□□ 0.85
PALB2-205ENST00000567003 CCDC85CA6NKD9 419 aa20.35■□□□□ 0.85
PALB2-205ENST00000567003 YDJCA8MPS7 323 aa20.35■□□□□ 0.85
PALB2-205ENST00000567003 KIAA2012Q0VF49 1180 aa20.35■□□□□ 0.85
PALB2-205ENST00000567003 DLK2Q6UY11 383 aa20.35■□□□□ 0.85
PALB2-205ENST00000567003 SAPCD2Q86UD0 394 aa20.35■□□□□ 0.85
PALB2-205ENST00000567003 CNKSR2Q8WXI2 1034 aa20.35■□□□□ 0.85
PALB2-205ENST00000567003 BCL2L13Q9BXK5 485 aa20.35■□□□□ 0.85
PALB2-205ENST00000567003 VPS33BQ9H267 617 aa20.35■□□□□ 0.85
PALB2-205ENST00000567003 COL4A1P02462 1669 aa20.35■□□□□ 0.85
PALB2-205ENST00000567003 DDX60Q8IY21 1712 aaKnown RBP20.34■□□□□ 0.85
PALB2-205ENST00000567003 BBOX1O75936 387 aa20.34■□□□□ 0.85
PALB2-205ENST00000567003 DDX46Q7L014 1031 aaKnown RBP20.34■□□□□ 0.85
PALB2-205ENST00000567003 TRMT112Q9UI30 125 aaKnown RBP20.34■□□□□ 0.85
PALB2-205ENST00000567003 CASP8AP2Q9UKL3 1982 aa20.34■□□□□ 0.85
PALB2-205ENST00000567003 MAPK8IP2Q13387 824 aaPredicted RBP20.33■□□□□ 0.85
PALB2-205ENST00000567003 GRAPQ13588 217 aa20.33■□□□□ 0.85
PALB2-205ENST00000567003 GRAPLQ8TC17 118 aaPredicted RBP20.33■□□□□ 0.85
PALB2-205ENST00000567003 PNNQ9H307 717 aaKnown RBP20.33■□□□□ 0.85
PALB2-205ENST00000567003 LRRC37AA6NMS7 1700 aa20.33■□□□□ 0.84
PALB2-205ENST00000567003 TCIRG1Q13488 830 aa20.32■□□□□ 0.84
PALB2-205ENST00000567003 HSP90AB3PQ58FF7 597 aa20.32■□□□□ 0.84
PALB2-205ENST00000567003 SH3TC1Q8TE82 1336 aa20.31■□□□□ 0.84
PALB2-205ENST00000567003 MAP2K2P36507 400 aa20.31■□□□□ 0.84
PALB2-205ENST00000567003 TMPOP42166 694 aaKnown RBP20.31■□□□□ 0.84
PALB2-205ENST00000567003 ZIC5Q96T25 663 aa20.31■□□□□ 0.84
PALB2-205ENST00000567003 PGAP2Q9UHJ9 254 aa20.31■□□□□ 0.84
PALB2-205ENST00000567003 CNOT7Q9UIV1 285 aaKnown RBP20.31■□□□□ 0.84
PALB2-205ENST00000567003 ZBTB12Q9Y330 459 aaPredicted RBP20.31■□□□□ 0.84
PALB2-205ENST00000567003 TNIP1Q15025 636 aa20.3■□□□□ 0.84
PALB2-205ENST00000567003 NEUROD2Q15784 382 aa20.3■□□□□ 0.84
PALB2-205ENST00000567003 USP48Q86UV5 1035 aa20.3■□□□□ 0.84
PALB2-205ENST00000567003 MICALL2Q8IY33 904 aa20.3■□□□□ 0.84
PALB2-205ENST00000567003 CCDC146Q8IYE0 955 aa20.3■□□□□ 0.84
PALB2-205ENST00000567003 CDHR2Q9BYE9 1310 aa20.29■□□□□ 0.84
PALB2-205ENST00000567003 DBNDD1Q9H9R9 158 aa20.29■□□□□ 0.84
PALB2-205ENST00000567003 CHPF2Q9P2E5 772 aa20.29■□□□□ 0.84
PALB2-205ENST00000567003 RIMBP2O15034 1052 aa20.28■□□□□ 0.84
PALB2-205ENST00000567003 SAMD7Q7Z3H4 446 aa20.28■□□□□ 0.84
PALB2-205ENST00000567003 CELF1Q92879 486 aaKnown RBP20.28■□□□□ 0.84
PALB2-205ENST00000567003 BABAM1Q9NWV8 329 aa20.28■□□□□ 0.84
PALB2-205ENST00000567003 LAS1LQ9Y4W2 734 aaKnown RBP20.28■□□□□ 0.84
PALB2-205ENST00000567003 POLR2AP24928 1970 aaKnown RBP20.28■□□□□ 0.84
PALB2-205ENST00000567003 PSMD14O00487 310 aa20.27■□□□□ 0.84
PALB2-205ENST00000567003 EGFRP00533 1210 aa20.27■□□□□ 0.84
PALB2-205ENST00000567003 RTL5Q5HYW3 569 aaPredicted RBP20.27■□□□□ 0.84
PALB2-205ENST00000567003 CDC37L1Q7L3B6 337 aa20.27■□□□□ 0.84
PALB2-205ENST00000567003 ZC3H15Q8WU90 426 aaKnown RBP20.27■□□□□ 0.84
PALB2-205ENST00000567003 FAM89AQ96GI7 184 aa20.27■□□□□ 0.84
PALB2-205ENST00000567003 MCOLN1Q9GZU1 580 aa20.27■□□□□ 0.84
PALB2-205ENST00000567003 ATP5J2-PTCD1G3V325 749 aa20.26■□□□□ 0.83
PALB2-205ENST00000567003 H7C1D1 291 aa20.26■□□□□ 0.83
PALB2-205ENST00000567003 NPM3O75607 178 aaKnown RBP20.26■□□□□ 0.83
PALB2-205ENST00000567003 BRPF1P55201 1214 aaPredicted RBP20.26■□□□□ 0.83
PALB2-205ENST00000567003 LMOD3Q0VAK6 560 aa20.26■□□□□ 0.83
PALB2-205ENST00000567003 TBC1D10BQ4KMP7 808 aaPredicted RBP20.26■□□□□ 0.83
PALB2-205ENST00000567003 HHIPL1Q96JK4 782 aa20.26■□□□□ 0.83
PALB2-205ENST00000567003 CFAP44Q96MT7 982 aa20.26■□□□□ 0.83
PALB2-205ENST00000567003 KCNQ5Q9NR82 932 aa20.26■□□□□ 0.83
PALB2-205ENST00000567003 HUNKP57058 714 aa20.25■□□□□ 0.83
PALB2-205ENST00000567003 GPSM2P81274 684 aa20.25■□□□□ 0.83
PALB2-205ENST00000567003 POLLQ9UGP5 575 aa20.25■□□□□ 0.83
PALB2-205ENST00000567003 NSFL1CQ9UNZ2 370 aaKnown RBP20.25■□□□□ 0.83
PALB2-205ENST00000567003 ADM5C9JUS6 153 aa20.24■□□□□ 0.83
PALB2-205ENST00000567003 C6orf229H3BNL8 230 aa20.24■□□□□ 0.83
PALB2-205ENST00000567003 CHL1O00533 1208 aa20.24■□□□□ 0.83
PALB2-205ENST00000567003 MLLT1Q03111 559 aaPredicted RBP20.24■□□□□ 0.83
PALB2-205ENST00000567003 DOK7Q18PE1 504 aa20.24■□□□□ 0.83
PALB2-205ENST00000567003 WASHC4Q2M389 1173 aa20.24■□□□□ 0.83
PALB2-205ENST00000567003 RBM26Q5T8P6 1007 aaKnown RBP20.24■□□□□ 0.83
PALB2-205ENST00000567003 HDGFL1Q5TGJ6 251 aa20.24■□□□□ 0.83
PALB2-205ENST00000567003 ISCA1Q9BUE6 129 aa20.24■□□□□ 0.83
PALB2-205ENST00000567003 RTL9Q8NET4 1388 aa20.23■□□□□ 0.83
PALB2-205ENST00000567003 SCN9AQ15858 1988 aa20.23■□□□□ 0.83
PALB2-205ENST00000567003 CA12O43570 354 aa20.23■□□□□ 0.83
PALB2-205ENST00000567003 TMC4Q7Z404 712 aa20.23■□□□□ 0.83
PALB2-205ENST00000567003 PLBD2Q8NHP8 589 aa20.23■□□□□ 0.83
PALB2-205ENST00000567003 TRIM35Q9UPQ4 493 aa20.23■□□□□ 0.83
PALB2-205ENST00000567003 ECE2O60344 883 aa20.22■□□□□ 0.83
PALB2-205ENST00000567003 DGKZQ13574 1117 aa20.22■□□□□ 0.83
PALB2-205ENST00000567003 KRT26Q7Z3Y9 468 aa20.22■□□□□ 0.83
PALB2-205ENST00000567003 SF3B3Q15393 1217 aaKnown RBP20.21■□□□□ 0.83
PALB2-205ENST00000567003 ANKRD13DQ6ZTN6 518 aa20.21■□□□□ 0.83
PALB2-205ENST00000567003 DPF2Q92785 391 aa20.21■□□□□ 0.83
PALB2-205ENST00000567003 ASTN2O75129 1339 aaPredicted RBP20.21■□□□□ 0.83
PALB2-205ENST00000567003 TNRC18O15417 2968 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms