RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 H7C1W4 665 aa17.38■□□□□ 0.37
SPG7-215ENST00000566682 HSP90B1P14625 803 aaKnown RBP17.38■□□□□ 0.37
SPG7-215ENST00000566682 SF3B3Q15393 1217 aaKnown RBP17.38■□□□□ 0.37
SPG7-215ENST00000566682 REM2Q8IYK8 340 aaPredicted RBP17.38■□□□□ 0.37
SPG7-215ENST00000566682 C7orf43Q8WVR3 580 aa17.38■□□□□ 0.37
SPG7-215ENST00000566682 NOB1Q9ULX3 412 aaKnown RBP17.38■□□□□ 0.37
SPG7-215ENST00000566682 CDHR2Q9BYE9 1310 aa17.38■□□□□ 0.37
SPG7-215ENST00000566682 SBF1O95248 1867 aa17.37■□□□□ 0.37
SPG7-215ENST00000566682 PDE8AO60658 829 aa17.37■□□□□ 0.37
SPG7-215ENST00000566682 UBE3BQ7Z3V4 1068 aa17.37■□□□□ 0.37
SPG7-215ENST00000566682 FER1L6Q2WGJ9 1857 aa17.37■□□□□ 0.37
SPG7-215ENST00000566682 CCDC88AQ3V6T2 1871 aa17.37■□□□□ 0.37
SPG7-215ENST00000566682 MYH3P11055 1940 aa17.37■□□□□ 0.37
SPG7-215ENST00000566682 YY1P25490 414 aa17.36■□□□□ 0.37
SPG7-215ENST00000566682 DDX46Q7L014 1031 aaKnown RBP17.36■□□□□ 0.37
SPG7-215ENST00000566682 SRCIN1Q9C0H9 1055 aa17.36■□□□□ 0.37
SPG7-215ENST00000566682 BCAR3O75815 825 aa17.35■□□□□ 0.37
SPG7-215ENST00000566682 ALDH1L1O75891 902 aa17.35■□□□□ 0.37
SPG7-215ENST00000566682 CASP7P55210 303 aa17.35■□□□□ 0.37
SPG7-215ENST00000566682 OLFM4Q6UX06 510 aa17.35■□□□□ 0.37
SPG7-215ENST00000566682 ABCC4O15439 1325 aa17.35■□□□□ 0.37
SPG7-215ENST00000566682 RASSF7Q02833 373 aa17.34■□□□□ 0.37
SPG7-215ENST00000566682 SOGA3Q5TF21 947 aa17.34■□□□□ 0.37
SPG7-215ENST00000566682 KIF16BQ96L93 1317 aa17.33■□□□□ 0.36
SPG7-215ENST00000566682 NFKBIEO00221 500 aa17.33■□□□□ 0.36
SPG7-215ENST00000566682 PPEF1O14829 653 aaPredicted RBP17.33■□□□□ 0.36
SPG7-215ENST00000566682 BBOX1O75936 387 aa17.33■□□□□ 0.36
SPG7-215ENST00000566682 GRAPQ13588 217 aa17.33■□□□□ 0.36
SPG7-215ENST00000566682 CCDC93Q567U6 631 aa17.33■□□□□ 0.36
SPG7-215ENST00000566682 GRAPLQ8TC17 118 aaPredicted RBP17.33■□□□□ 0.36
SPG7-215ENST00000566682 C9orf78Q9NZ63 289 aaPredicted RBP17.33■□□□□ 0.36
SPG7-215ENST00000566682 GRM8O00222 908 aa17.32■□□□□ 0.36
SPG7-215ENST00000566682 CTSWP56202 376 aa17.32■□□□□ 0.36
SPG7-215ENST00000566682 CCDC152Q4G0S7 254 aa17.32■□□□□ 0.36
SPG7-215ENST00000566682 TTLL11Q8NHH1 800 aa17.32■□□□□ 0.36
SPG7-215ENST00000566682 ARHGAP45Q92619 1136 aa17.32■□□□□ 0.36
SPG7-215ENST00000566682 CELF1Q92879 486 aaKnown RBP17.32■□□□□ 0.36
SPG7-215ENST00000566682 CCDC85AQ96PX6 553 aaPredicted RBP17.32■□□□□ 0.36
SPG7-215ENST00000566682 PLA2G12BQ9BX93 195 aa17.32■□□□□ 0.36
SPG7-215ENST00000566682 API5Q9BZZ5 524 aaKnown RBP17.32■□□□□ 0.36
SPG7-215ENST00000566682 PRELPP51888 382 aa17.31■□□□□ 0.36
SPG7-215ENST00000566682 CC2D2BQ6DHV5 1058 aa17.31■□□□□ 0.36
SPG7-215ENST00000566682 SLC51AQ86UW1 340 aa17.31■□□□□ 0.36
SPG7-215ENST00000566682 FRAT1Q92837 279 aaPredicted RBP17.31■□□□□ 0.36
SPG7-215ENST00000566682 SEC31BQ9NQW1 1179 aa17.31■□□□□ 0.36
SPG7-215ENST00000566682 ATP6V0A2Q9Y487 856 aa17.31■□□□□ 0.36
SPG7-215ENST00000566682 COL4A1P02462 1669 aa17.31■□□□□ 0.36
SPG7-215ENST00000566682 IPO8O15397 1037 aaKnown RBP17.3■□□□□ 0.36
SPG7-215ENST00000566682 C9orf131Q5VYM1 1079 aa17.3■□□□□ 0.36
SPG7-215ENST00000566682 SP8Q8IXZ3 490 aa17.3■□□□□ 0.36
SPG7-215ENST00000566682 RTKN2Q8IZC4 609 aa17.3■□□□□ 0.36
SPG7-215ENST00000566682 YTHDC1Q96MU7 727 aaKnown RBP17.3■□□□□ 0.36
SPG7-215ENST00000566682 TAOK3Q9H2K8 898 aa17.3■□□□□ 0.36
SPG7-215ENST00000566682 LTBP3Q9NS15 1303 aa17.29■□□□□ 0.36
SPG7-215ENST00000566682 NBPF7P0C2Y1 421 aaPredicted RBP17.29■□□□□ 0.36
SPG7-215ENST00000566682 LMNB1P20700 586 aa17.29■□□□□ 0.36
SPG7-215ENST00000566682 RPS8P62241 208 aaKnown RBP17.29■□□□□ 0.36
SPG7-215ENST00000566682 TMX4Q9H1E5 349 aaPredicted RBP17.29■□□□□ 0.36
SPG7-215ENST00000566682 RNF181Q9P0P0 153 aa17.29■□□□□ 0.36
SPG7-215ENST00000566682 DICER1Q9UPY3 1922 aaKnown RBP17.29■□□□□ 0.36
SPG7-215ENST00000566682 SNED1Q8TER0 1413 aa17.29■□□□□ 0.36
SPG7-215ENST00000566682 UTYO14607 1347 aa17.28■□□□□ 0.36
SPG7-215ENST00000566682 CSF1RP07333 972 aa17.28■□□□□ 0.36
SPG7-215ENST00000566682 CCT4P50991 539 aaKnown RBP17.28■□□□□ 0.36
SPG7-215ENST00000566682 FOXO4P98177 505 aa17.28■□□□□ 0.36
SPG7-215ENST00000566682 FKBP4Q02790 459 aaKnown RBP eCLIP17.28■□□□□ 0.36
SPG7-215ENST00000566682 GRIPAP1Q4V328 841 aa17.28■□□□□ 0.36
SPG7-215ENST00000566682 ATF7IPQ6VMQ6 1270 aa17.28■□□□□ 0.36
SPG7-215ENST00000566682 TMC4Q7Z404 712 aa17.28■□□□□ 0.36
SPG7-215ENST00000566682 USP44Q9H0E7 712 aa17.28■□□□□ 0.36
SPG7-215ENST00000566682 GREM2Q9H772 168 aa17.28■□□□□ 0.36
SPG7-215ENST00000566682 TRIM27P14373 513 aa17.27■□□□□ 0.36
SPG7-215ENST00000566682 EPHA10Q5JZY3 1008 aa17.27■□□□□ 0.36
SPG7-215ENST00000566682 TNNQ9UQP3 1299 aa17.27■□□□□ 0.36
SPG7-215ENST00000566682 ZKSCAN2Q63HK3 967 aa17.26■□□□□ 0.35
SPG7-215ENST00000566682 SUCLG2Q96I99 432 aa17.26■□□□□ 0.35
SPG7-215ENST00000566682 PSMD1Q99460 953 aa17.26■□□□□ 0.35
SPG7-215ENST00000566682 LRRC37AA6NMS7 1700 aa17.26■□□□□ 0.35
SPG7-215ENST00000566682 RTL9Q8NET4 1388 aa17.26■□□□□ 0.35
SPG7-215ENST00000566682 SPEF2Q9C093 1822 aa17.26■□□□□ 0.35
SPG7-215ENST00000566682 ITGA6P23229 1130 aa17.25■□□□□ 0.35
SPG7-215ENST00000566682 FAM161AQ3B820 660 aa17.25■□□□□ 0.35
SPG7-215ENST00000566682 INTS3Q68E01 1043 aaKnown RBP17.25■□□□□ 0.35
SPG7-215ENST00000566682 LMBR1LQ6UX01 489 aa17.25■□□□□ 0.35
SPG7-215ENST00000566682 ANKRD18AQ8IVF6 992 aa17.25■□□□□ 0.35
SPG7-215ENST00000566682 MPNDQ8N594 471 aa17.25■□□□□ 0.35
SPG7-215ENST00000566682 CLUAP1Q96AJ1 413 aa17.25■□□□□ 0.35
SPG7-215ENST00000566682 KAZALD1Q96I82 304 aa17.25■□□□□ 0.35
SPG7-215ENST00000566682 CDC5LQ99459 802 aaKnown RBP17.25■□□□□ 0.35
SPG7-215ENST00000566682 ZNF277Q9NRM2 450 aaPredicted RBP17.25■□□□□ 0.35
SPG7-215ENST00000566682 ZNF784Q8NCA9 323 aaPredicted RBP17.24■□□□□ 0.35
SPG7-215ENST00000566682 CHMP3Q9Y3E7 222 aa17.24■□□□□ 0.35
SPG7-215ENST00000566682 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
SPG7-215ENST00000566682 PITPNM1O00562 1244 aa17.23■□□□□ 0.35
SPG7-215ENST00000566682 IARSP41252 1262 aaKnown RBP17.23■□□□□ 0.35
SPG7-215ENST00000566682 DPP8Q6V1X1 898 aaPredicted RBP17.23■□□□□ 0.35
SPG7-215ENST00000566682 RCAN3Q9UKA8 241 aa17.23■□□□□ 0.35
SPG7-215ENST00000566682 NSFL1CQ9UNZ2 370 aaKnown RBP17.23■□□□□ 0.35
SPG7-215ENST00000566682 ANKRD18BA2A2Z9 1011 aa17.22■□□□□ 0.35
SPG7-215ENST00000566682 GPSM2P81274 684 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms