RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 PCCAP05165 728 aaPredicted RBP10.51□□□□□ -0.73
LINC01541-201ENST00000566582 CYP19A1P11511 503 aaPredicted RBP10.51□□□□□ -0.73
LINC01541-201ENST00000566582 NCLP19338 710 aaKnown RBP10.51□□□□□ -0.73
LINC01541-201ENST00000566582 NECTIN1Q15223 517 aa10.51□□□□□ -0.73
LINC01541-201ENST00000566582 ADCK5Q3MIX3 580 aa10.51□□□□□ -0.73
LINC01541-201ENST00000566582 DDX46Q7L014 1031 aaKnown RBP10.51□□□□□ -0.73
LINC01541-201ENST00000566582 ZBTB38Q8NAP3 1195 aaPredicted RBP10.51□□□□□ -0.73
LINC01541-201ENST00000566582 MAP4K1Q92918 833 aa10.51□□□□□ -0.73
LINC01541-201ENST00000566582 ACSBG1Q96GR2 724 aa10.51□□□□□ -0.73
LINC01541-201ENST00000566582 PDRG1Q9NUG6 133 aa10.51□□□□□ -0.73
LINC01541-201ENST00000566582 CEP126Q9P2H0 1117 aa10.51□□□□□ -0.73
LINC01541-201ENST00000566582 LIMCH1Q9UPQ0 1083 aa10.51□□□□□ -0.73
LINC01541-201ENST00000566582 ZBTB1Q9Y2K1 713 aa10.51□□□□□ -0.73
LINC01541-201ENST00000566582 TRIM28Q13263 835 aaKnown RBP10.5□□□□□ -0.73
LINC01541-201ENST00000566582 HLFQ16534 295 aa10.5□□□□□ -0.73
LINC01541-201ENST00000566582 GORABQ5T7V8 394 aa10.5□□□□□ -0.73
LINC01541-201ENST00000566582 CREB3L3Q68CJ9 461 aa10.5□□□□□ -0.73
LINC01541-201ENST00000566582 HAUS7Q99871 368 aa10.5□□□□□ -0.73
LINC01541-201ENST00000566582 CDCA7Q9BWT1 371 aaPredicted RBP10.5□□□□□ -0.73
LINC01541-201ENST00000566582 PUS3Q9BZE2 481 aaKnown RBP10.5□□□□□ -0.73
LINC01541-201ENST00000566582 COL16A1Q07092 1604 aaPredicted RBP10.5□□□□□ -0.73
LINC01541-201ENST00000566582 TJP1Q07157 1748 aa10.5□□□□□ -0.73
LINC01541-201ENST00000566582 A0A1B0GUL7 405 aa10.5□□□□□ -0.73
LINC01541-201ENST00000566582 PSMA5P28066 241 aa10.5□□□□□ -0.73
LINC01541-201ENST00000566582 IFIT5Q13325 482 aaKnown RBP10.5□□□□□ -0.73
LINC01541-201ENST00000566582 HSP90AB3PQ58FF7 597 aa10.5□□□□□ -0.73
LINC01541-201ENST00000566582 ZNF589Q86UQ0 364 aaPredicted RBP10.5□□□□□ -0.73
LINC01541-201ENST00000566582 TTC14Q96N46 770 aa10.5□□□□□ -0.73
LINC01541-201ENST00000566582 SLC4A9Q96Q91 983 aa10.5□□□□□ -0.73
LINC01541-201ENST00000566582 BRPF3Q9ULD4 1205 aa10.5□□□□□ -0.73
LINC01541-201ENST00000566582 ZDHHC9Q9Y397 364 aa10.5□□□□□ -0.73
LINC01541-201ENST00000566582 COL22A1Q8NFW1 1626 aaPredicted RBP10.49□□□□□ -0.73
LINC01541-201ENST00000566582 GOLIM4O00461 696 aa10.49□□□□□ -0.73
LINC01541-201ENST00000566582 CIAO1O76071 339 aa10.49□□□□□ -0.73
LINC01541-201ENST00000566582 RUFY3Q7L099 469 aa10.49□□□□□ -0.73
LINC01541-201ENST00000566582 DZIP3Q86Y13 1208 aaKnown RBP10.49□□□□□ -0.73
LINC01541-201ENST00000566582 GPR108Q9NPR9 543 aa10.49□□□□□ -0.73
LINC01541-201ENST00000566582 TBC1D2BQ9UPU7 963 aa10.49□□□□□ -0.73
LINC01541-201ENST00000566582 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.49□□□□□ -0.73
LINC01541-201ENST00000566582 SPATA31A1Q5TZJ5 1347 aa10.49□□□□□ -0.73
LINC01541-201ENST00000566582 SLC27A2O14975 620 aa10.49□□□□□ -0.73
LINC01541-201ENST00000566582 IFIT1P09914 478 aaKnown RBP10.49□□□□□ -0.73
LINC01541-201ENST00000566582 VPS53Q5VIR6 699 aa10.49□□□□□ -0.73
LINC01541-201ENST00000566582 SYNE4Q8N205 404 aa10.49□□□□□ -0.73
LINC01541-201ENST00000566582 TM6SF1Q9BZW5 370 aa10.49□□□□□ -0.73
LINC01541-201ENST00000566582 ZSWIM6Q9HCJ5 1215 aa10.49□□□□□ -0.73
LINC01541-201ENST00000566582 PAG1Q9NWQ8 432 aa10.49□□□□□ -0.73
LINC01541-201ENST00000566582 TRMT112Q9UI30 125 aaKnown RBP10.49□□□□□ -0.73
LINC01541-201ENST00000566582 THRAP3Q9Y2W1 955 aaKnown RBP10.49□□□□□ -0.73
LINC01541-201ENST00000566582 PHLPP1O60346 1717 aa10.48□□□□□ -0.73
LINC01541-201ENST00000566582 PRPF40AO75400 957 aaKnown RBP10.48□□□□□ -0.73
LINC01541-201ENST00000566582 NLRP10Q86W26 655 aa10.48□□□□□ -0.73
LINC01541-201ENST00000566582 KBTBD3Q8NAB2 608 aa10.48□□□□□ -0.73
LINC01541-201ENST00000566582 AKAP2Q9Y2D5 859 aa10.48□□□□□ -0.73
LINC01541-201ENST00000566582 TOM1O60784 492 aa10.48□□□□□ -0.73
LINC01541-201ENST00000566582 FOXD4L6Q3SYB3 417 aaPredicted RBP10.48□□□□□ -0.73
LINC01541-201ENST00000566582 MCMDC2Q4G0Z9 681 aa10.48□□□□□ -0.73
LINC01541-201ENST00000566582 CCDC158Q5M9N0 1113 aa10.48□□□□□ -0.73
LINC01541-201ENST00000566582 BLOC1S2Q6QNY1 142 aa10.48□□□□□ -0.73
LINC01541-201ENST00000566582 FOXD4L3Q6VB84 417 aaPredicted RBP10.48□□□□□ -0.73
LINC01541-201ENST00000566582 SEC62Q99442 399 aaKnown RBP10.48□□□□□ -0.73
LINC01541-201ENST00000566582 SMC3Q9UQE7 1217 aa10.48□□□□□ -0.73
LINC01541-201ENST00000566582 PLCH1Q4KWH8 1693 aa10.48□□□□□ -0.73
LINC01541-201ENST00000566582 MED23Q9ULK4 1368 aa10.48□□□□□ -0.73
LINC01541-201ENST00000566582 TAF5LO75529 589 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 BRD1O95696 1058 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 CHGBP05060 677 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 ATP6V1AP38606 617 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 IL6STP40189 918 aaPredicted RBP10.47□□□□□ -0.73
LINC01541-201ENST00000566582 FKBP4Q02790 459 aaKnown RBP eCLIP10.47□□□□□ -0.73
LINC01541-201ENST00000566582 KLHL40Q2TBA0 621 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 TTC39AQ5SRH9 613 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 CCDC129Q6ZRS4 1044 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 SNRKQ9NRH2 765 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 IRS4O14654 1257 aaPredicted RBP10.47□□□□□ -0.73
LINC01541-201ENST00000566582 ITGA6P23229 1130 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 LDHAL6AQ6ZMR3 332 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 CCDC83Q8IWF9 413 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 KCNB2Q92953 911 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 CHAMP1Q96JM3 812 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 ZSCAN31Q96LW9 406 aaPredicted RBP10.47□□□□□ -0.73
LINC01541-201ENST00000566582 LMBRD1Q9NUN5 540 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 HMG20BQ9P0W2 317 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 WDR33Q9C0J8 1336 aaKnown RBP10.47□□□□□ -0.73
LINC01541-201ENST00000566582 ZNF609O15014 1411 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 LRP6O75581 1613 aa10.47□□□□□ -0.73
LINC01541-201ENST00000566582 FAM177BA6PVY3 158 aa10.46□□□□□ -0.73
LINC01541-201ENST00000566582 TPRNQ4KMQ1 711 aa10.46□□□□□ -0.73
LINC01541-201ENST00000566582 METTL24Q5JXM2 366 aa10.46□□□□□ -0.73
LINC01541-201ENST00000566582 PLA2G12BQ9BX93 195 aa10.46□□□□□ -0.73
LINC01541-201ENST00000566582 SH2B1Q9NRF2 756 aaPredicted RBP10.46□□□□□ -0.73
LINC01541-201ENST00000566582 CNNM1Q9NRU3 951 aa10.46□□□□□ -0.73
LINC01541-201ENST00000566582 FBXO3Q9UK99 471 aa10.46□□□□□ -0.73
LINC01541-201ENST00000566582 RFX7Q2KHR2 1363 aa10.46□□□□□ -0.73
LINC01541-201ENST00000566582 ANKRD18BA2A2Z9 1011 aa10.46□□□□□ -0.74
LINC01541-201ENST00000566582 LARGE1O95461 756 aa10.46□□□□□ -0.74
LINC01541-201ENST00000566582 CSF1RP07333 972 aa10.46□□□□□ -0.74
LINC01541-201ENST00000566582 CTSWP56202 376 aa10.46□□□□□ -0.74
LINC01541-201ENST00000566582 LTBP4Q8N2S1 1624 aa10.46□□□□□ -0.74
LINC01541-201ENST00000566582 MARCH10Q8NA82 808 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms