RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 HSPA1BP0DMV9 641 aaKnown RBP20.67■□□□□ 0.9
SCAMP2-208ENST00000566557 NPR1P16066 1061 aa20.67■□□□□ 0.9
SCAMP2-208ENST00000566557 HSP90B1P14625 803 aaKnown RBP20.66■□□□□ 0.9
SCAMP2-208ENST00000566557 SLC10A5Q5PT55 438 aa20.66■□□□□ 0.9
SCAMP2-208ENST00000566557 ZKSCAN2Q63HK3 967 aa20.66■□□□□ 0.9
SCAMP2-208ENST00000566557 STYK1Q6J9G0 422 aa20.66■□□□□ 0.9
SCAMP2-208ENST00000566557 TTLL6Q8N841 843 aa20.66■□□□□ 0.9
SCAMP2-208ENST00000566557 C9orf78Q9NZ63 289 aaPredicted RBP20.66■□□□□ 0.9
SCAMP2-208ENST00000566557 ZNF219Q9P2Y4 722 aaPredicted RBP20.66■□□□□ 0.9
SCAMP2-208ENST00000566557 ARFGEF1Q9Y6D6 1849 aa20.66■□□□□ 0.9
SCAMP2-208ENST00000566557 MYH3P11055 1940 aa20.66■□□□□ 0.9
SCAMP2-208ENST00000566557 CDHR2Q9BYE9 1310 aa20.65■□□□□ 0.9
SCAMP2-208ENST00000566557 ATF7IPQ6VMQ6 1270 aa20.65■□□□□ 0.9
SCAMP2-208ENST00000566557 ARHGAP45Q92619 1136 aa20.65■□□□□ 0.9
SCAMP2-208ENST00000566557 CNKSR1Q969H4 720 aa20.65■□□□□ 0.9
SCAMP2-208ENST00000566557 CLUAP1Q96AJ1 413 aa20.65■□□□□ 0.9
SCAMP2-208ENST00000566557 TNNQ9UQP3 1299 aa20.65■□□□□ 0.9
SCAMP2-208ENST00000566557 KLRG2A4D1S0 409 aaPredicted RBP20.64■□□□□ 0.89
SCAMP2-208ENST00000566557 GRM8O00222 908 aa20.64■□□□□ 0.89
SCAMP2-208ENST00000566557 TRIM27P14373 513 aa20.64■□□□□ 0.89
SCAMP2-208ENST00000566557 CRY2Q49AN0 593 aa20.64■□□□□ 0.89
SCAMP2-208ENST00000566557 RBM17Q96I25 401 aaKnown RBP20.64■□□□□ 0.89
SCAMP2-208ENST00000566557 ABCC4O15439 1325 aa20.63■□□□□ 0.89
SCAMP2-208ENST00000566557 H7C1W4 665 aa20.63■□□□□ 0.89
SCAMP2-208ENST00000566557 PDE8AO60658 829 aa20.63■□□□□ 0.89
SCAMP2-208ENST00000566557 CCT4P50991 539 aaKnown RBP20.63■□□□□ 0.89
SCAMP2-208ENST00000566557 PRPF40BQ6NWY9 871 aaKnown RBP20.63■□□□□ 0.89
SCAMP2-208ENST00000566557 FTSJ3Q8IY81 847 aaKnown RBP20.63■□□□□ 0.89
SCAMP2-208ENST00000566557 CCDC85AQ96PX6 553 aaPredicted RBP20.63■□□□□ 0.89
SCAMP2-208ENST00000566557 SLX4Q8IY92 1834 aa20.62■□□□□ 0.89
SCAMP2-208ENST00000566557 DDX46Q7L014 1031 aaKnown RBP20.62■□□□□ 0.89
SCAMP2-208ENST00000566557 ALDH1B1P30837 517 aa20.61■□□□□ 0.89
SCAMP2-208ENST00000566557 CTSWP56202 376 aa20.61■□□□□ 0.89
SCAMP2-208ENST00000566557 VEGFAP15692 232 aaPredicted RBP20.6■□□□□ 0.89
SCAMP2-208ENST00000566557 CCDC152Q4G0S7 254 aa20.6■□□□□ 0.89
SCAMP2-208ENST00000566557 TAF1P21675 1872 aa20.6■□□□□ 0.89
SCAMP2-208ENST00000566557 C21orf2O43822 256 aa20.59■□□□□ 0.89
SCAMP2-208ENST00000566557 CASP7P55210 303 aa20.59■□□□□ 0.89
SCAMP2-208ENST00000566557 SPEF2Q9C093 1822 aa20.59■□□□□ 0.89
SCAMP2-208ENST00000566557 PPEF1O14829 653 aaPredicted RBP20.58■□□□□ 0.89
SCAMP2-208ENST00000566557 HOXA10P31260 410 aaPredicted RBP20.58■□□□□ 0.89
SCAMP2-208ENST00000566557 SF3B3Q15393 1217 aaKnown RBP20.58■□□□□ 0.89
SCAMP2-208ENST00000566557 DZIP1LQ8IYY4 767 aaKnown RBP20.58■□□□□ 0.89
SCAMP2-208ENST00000566557 CRAMP1Q96RY5 1269 aa20.58■□□□□ 0.89
SCAMP2-208ENST00000566557 CHMP3Q9Y3E7 222 aa20.58■□□□□ 0.89
SCAMP2-208ENST00000566557 NBPF7P0C2Y1 421 aaPredicted RBP20.57■□□□□ 0.88
SCAMP2-208ENST00000566557 RASSF7Q02833 373 aa20.57■□□□□ 0.88
SCAMP2-208ENST00000566557 TMEM57Q8N5G2 664 aa20.57■□□□□ 0.88
SCAMP2-208ENST00000566557 SUCLG2Q96I99 432 aa20.57■□□□□ 0.88
SCAMP2-208ENST00000566557 GLTPD2A6NH11 291 aa20.56■□□□□ 0.88
SCAMP2-208ENST00000566557 PLIN1O60240 522 aa20.56■□□□□ 0.88
SCAMP2-208ENST00000566557 GRAPQ13588 217 aa20.56■□□□□ 0.88
SCAMP2-208ENST00000566557 INTS3Q68E01 1043 aaKnown RBP20.56■□□□□ 0.88
SCAMP2-208ENST00000566557 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.56■□□□□ 0.88
SCAMP2-208ENST00000566557 GRAPLQ8TC17 118 aaPredicted RBP20.56■□□□□ 0.88
SCAMP2-208ENST00000566557 COL4A1P02462 1669 aa20.55■□□□□ 0.88
SCAMP2-208ENST00000566557 UBTFL1P0CB47 393 aaPredicted RBP20.55■□□□□ 0.88
SCAMP2-208ENST00000566557 ITPRIPQ8IWB1 547 aa20.55■□□□□ 0.88
SCAMP2-208ENST00000566557 TTLL11Q8NHH1 800 aa20.55■□□□□ 0.88
SCAMP2-208ENST00000566557 PLA2G12BQ9BX93 195 aa20.55■□□□□ 0.88
SCAMP2-208ENST00000566557 USP44Q9H0E7 712 aa20.55■□□□□ 0.88
SCAMP2-208ENST00000566557 TMX4Q9H1E5 349 aaPredicted RBP20.55■□□□□ 0.88
SCAMP2-208ENST00000566557 SEC31BQ9NQW1 1179 aa20.55■□□□□ 0.88
SCAMP2-208ENST00000566557 UTYO14607 1347 aa20.54■□□□□ 0.88
SCAMP2-208ENST00000566557 LMNB1P20700 586 aa20.54■□□□□ 0.88
SCAMP2-208ENST00000566557 FAM161AQ3B820 660 aa20.54■□□□□ 0.88
SCAMP2-208ENST00000566557 CCDC93Q567U6 631 aa20.54■□□□□ 0.88
SCAMP2-208ENST00000566557 OLFM4Q6UX06 510 aa20.54■□□□□ 0.88
SCAMP2-208ENST00000566557 CELF1Q92879 486 aaKnown RBP20.54■□□□□ 0.88
SCAMP2-208ENST00000566557 GREM2Q9H772 168 aa20.54■□□□□ 0.88
SCAMP2-208ENST00000566557 ZC3H4Q9UPT8 1303 aaKnown RBP20.53■□□□□ 0.88
SCAMP2-208ENST00000566557 MS4A1P11836 297 aa20.53■□□□□ 0.88
SCAMP2-208ENST00000566557 RLBP1P12271 317 aa20.53■□□□□ 0.88
SCAMP2-208ENST00000566557 EPHA10Q5JZY3 1008 aa20.53■□□□□ 0.88
SCAMP2-208ENST00000566557 SOGA3Q5TF21 947 aa20.53■□□□□ 0.88
SCAMP2-208ENST00000566557 LMBR1LQ6UX01 489 aa20.53■□□□□ 0.88
SCAMP2-208ENST00000566557 PANK1Q8TE04 598 aa20.53■□□□□ 0.88
SCAMP2-208ENST00000566557 MEIS3Q99687 375 aa20.53■□□□□ 0.88
SCAMP2-208ENST00000566557 FOXO4P98177 505 aa20.52■□□□□ 0.88
SCAMP2-208ENST00000566557 SLC51AQ86UW1 340 aa20.52■□□□□ 0.88
SCAMP2-208ENST00000566557 CDC5LQ99459 802 aaKnown RBP20.52■□□□□ 0.88
SCAMP2-208ENST00000566557 BICC1Q9H694 974 aaKnown RBP20.52■□□□□ 0.88
SCAMP2-208ENST00000566557 FER1L6Q2WGJ9 1857 aa20.52■□□□□ 0.87
SCAMP2-208ENST00000566557 LRRC37AA6NMS7 1700 aa20.51■□□□□ 0.87
SCAMP2-208ENST00000566557 ITGA6P23229 1130 aa20.51■□□□□ 0.87
SCAMP2-208ENST00000566557 ANKRD18AQ8IVF6 992 aa20.51■□□□□ 0.87
SCAMP2-208ENST00000566557 RTL9Q8NET4 1388 aa20.5■□□□□ 0.87
SCAMP2-208ENST00000566557 BBOX1O75936 387 aa20.5■□□□□ 0.87
SCAMP2-208ENST00000566557 GNAI3P08754 354 aa20.5■□□□□ 0.87
SCAMP2-208ENST00000566557 TAF7LQ5H9L4 462 aa20.5■□□□□ 0.87
SCAMP2-208ENST00000566557 ANKRD18BA2A2Z9 1011 aa20.49■□□□□ 0.87
SCAMP2-208ENST00000566557 CSF1RP07333 972 aa20.49■□□□□ 0.87
SCAMP2-208ENST00000566557 RPS8P62241 208 aaKnown RBP20.49■□□□□ 0.87
SCAMP2-208ENST00000566557 IFIT5Q13325 482 aaKnown RBP20.49■□□□□ 0.87
SCAMP2-208ENST00000566557 TMC4Q7Z404 712 aa20.49■□□□□ 0.87
SCAMP2-208ENST00000566557 C7orf43Q8WVR3 580 aa20.49■□□□□ 0.87
SCAMP2-208ENST00000566557 KAZALD1Q96I82 304 aa20.49■□□□□ 0.87
SCAMP2-208ENST00000566557 HDAC5Q9UQL6 1122 aa20.49■□□□□ 0.87
SCAMP2-208ENST00000566557 ATP6V0A2Q9Y487 856 aa20.49■□□□□ 0.87
SCAMP2-208ENST00000566557 LRRFIP2Q9Y608 721 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms