RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 TIMM10P62072 90 aa22.43■■□□□ 1.18
MSLN-207ENST00000566549 DNAJC10Q8IXB1 793 aa22.43■■□□□ 1.18
MSLN-207ENST00000566549 FAM43AQ8N2R8 423 aa22.43■■□□□ 1.18
MSLN-207ENST00000566549 TMEM63CQ9P1W3 806 aa22.43■■□□□ 1.18
MSLN-207ENST00000566549 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.43■■□□□ 1.18
MSLN-207ENST00000566549 NECAB1Q8N987 351 aa22.43■■□□□ 1.18
MSLN-207ENST00000566549 CCDC191Q8NCU4 936 aa22.43■■□□□ 1.18
MSLN-207ENST00000566549 TM6SF1Q9BZW5 370 aa22.43■■□□□ 1.18
MSLN-207ENST00000566549 ABCA3Q99758 1704 aa22.42■■□□□ 1.18
MSLN-207ENST00000566549 SYT1P21579 422 aa22.42■■□□□ 1.18
MSLN-207ENST00000566549 RRAGDQ9NQL2 400 aaPredicted RBP22.42■■□□□ 1.18
MSLN-207ENST00000566549 SNRKQ9NRH2 765 aa22.42■■□□□ 1.18
MSLN-207ENST00000566549 TNS2Q63HR2 1409 aa22.42■■□□□ 1.18
MSLN-207ENST00000566549 ME3Q16798 604 aa22.41■■□□□ 1.18
MSLN-207ENST00000566549 TAF5LO75529 589 aa22.41■■□□□ 1.18
MSLN-207ENST00000566549 NASPP49321 788 aaPredicted RBP22.41■■□□□ 1.18
MSLN-207ENST00000566549 ZNF445P59923 1031 aa22.41■■□□□ 1.18
MSLN-207ENST00000566549 SLFNL1Q499Z3 407 aa22.41■■□□□ 1.18
MSLN-207ENST00000566549 PUS3Q9BZE2 481 aaKnown RBP22.41■■□□□ 1.18
MSLN-207ENST00000566549 UBR2Q8IWV8 1755 aa22.4■■□□□ 1.18
MSLN-207ENST00000566549 STX6O43752 255 aa22.4■■□□□ 1.18
MSLN-207ENST00000566549 GJB2P29033 226 aa22.4■■□□□ 1.18
MSLN-207ENST00000566549 RNF20Q5VTR2 975 aa22.4■■□□□ 1.18
MSLN-207ENST00000566549 HAUS7Q99871 368 aa22.4■■□□□ 1.18
MSLN-207ENST00000566549 TPCN1Q9ULQ1 816 aa22.4■■□□□ 1.18
MSLN-207ENST00000566549 ST3GAL1Q11201 340 aa22.4■■□□□ 1.18
MSLN-207ENST00000566549 SHANK3Q9BYB0 1731 aa22.4■■□□□ 1.18
MSLN-207ENST00000566549 SYCE3A1L190 88 aa22.39■■□□□ 1.18
MSLN-207ENST00000566549 GOLIM4O00461 696 aa22.39■■□□□ 1.18
MSLN-207ENST00000566549 GADD45BO75293 160 aaPredicted RBP22.39■■□□□ 1.18
MSLN-207ENST00000566549 PRIM1P49642 420 aaKnown RBP22.39■■□□□ 1.18
MSLN-207ENST00000566549 ZNF609O15014 1411 aa22.39■■□□□ 1.17
MSLN-207ENST00000566549 ZSCAN22P10073 491 aaPredicted RBP22.39■■□□□ 1.17
MSLN-207ENST00000566549 PSMA5P28066 241 aa22.39■■□□□ 1.17
MSLN-207ENST00000566549 BLOC1S2Q6QNY1 142 aa22.39■■□□□ 1.17
MSLN-207ENST00000566549 SYTL4Q96C24 671 aaPredicted RBP22.39■■□□□ 1.17
MSLN-207ENST00000566549 FAM89AQ96GI7 184 aa22.39■■□□□ 1.17
MSLN-207ENST00000566549 IL15P40933 162 aaPredicted RBP22.38■■□□□ 1.17
MSLN-207ENST00000566549 USP48Q86UV5 1035 aa22.38■■□□□ 1.17
MSLN-207ENST00000566549 EYA2O00167 538 aa22.38■■□□□ 1.17
MSLN-207ENST00000566549 ATG3Q9NT62 314 aa22.38■■□□□ 1.17
MSLN-207ENST00000566549 CNPY2Q9Y2B0 182 aa22.38■■□□□ 1.17
MSLN-207ENST00000566549 TCIRG1Q13488 830 aa22.37■■□□□ 1.17
MSLN-207ENST00000566549 ZSCAN31Q96LW9 406 aaPredicted RBP22.37■■□□□ 1.17
MSLN-207ENST00000566549 SH2B1Q9NRF2 756 aaPredicted RBP22.37■■□□□ 1.17
MSLN-207ENST00000566549 PAPPAQ13219 1627 aa22.37■■□□□ 1.17
MSLN-207ENST00000566549 TOGARAM1Q9Y4F4 1720 aa22.37■■□□□ 1.17
MSLN-207ENST00000566549 MBD3O95983 291 aa22.37■■□□□ 1.17
MSLN-207ENST00000566549 NUP188Q5SRE5 1749 aa22.36■■□□□ 1.17
MSLN-207ENST00000566549 KIF6Q6ZMV9 814 aa22.36■■□□□ 1.17
MSLN-207ENST00000566549 ISCA1Q9BUE6 129 aa22.36■■□□□ 1.17
MSLN-207ENST00000566549 RBSNQ9H1K0 784 aa22.36■■□□□ 1.17
MSLN-207ENST00000566549 A0A1B0GUL7 405 aa22.35■■□□□ 1.17
MSLN-207ENST00000566549 RPS6KB1P23443 525 aa22.35■■□□□ 1.17
MSLN-207ENST00000566549 GPTP24298 496 aa22.35■■□□□ 1.17
MSLN-207ENST00000566549 STK3Q13188 491 aa22.35■■□□□ 1.17
MSLN-207ENST00000566549 CCDC57Q2TAC2 916 aa22.35■■□□□ 1.17
MSLN-207ENST00000566549 SYNE4Q8N205 404 aa22.35■■□□□ 1.17
MSLN-207ENST00000566549 KBTBD3Q8NAB2 608 aa22.35■■□□□ 1.17
MSLN-207ENST00000566549 PAG1Q9NWQ8 432 aa22.35■■□□□ 1.17
MSLN-207ENST00000566549 TJP1Q07157 1748 aa22.35■■□□□ 1.17
MSLN-207ENST00000566549 VPS37CA5D8V6 355 aaPredicted RBP22.35■■□□□ 1.17
MSLN-207ENST00000566549 MCMDC2Q4G0Z9 681 aa22.35■■□□□ 1.17
MSLN-207ENST00000566549 F13A1P00488 732 aa22.34■■□□□ 1.17
MSLN-207ENST00000566549 STARD3NLO95772 234 aa22.33■■□□□ 1.17
MSLN-207ENST00000566549 JCADQ9P266 1359 aa22.33■■□□□ 1.17
MSLN-207ENST00000566549 A0A0G2JS52 829 aa22.33■■□□□ 1.17
MSLN-207ENST00000566549 HLFQ16534 295 aa22.33■■□□□ 1.17
MSLN-207ENST00000566549 HMG20BQ9P0W2 317 aa22.33■■□□□ 1.17
MSLN-207ENST00000566549 FIBPO43427 364 aa22.32■■□□□ 1.16
MSLN-207ENST00000566549 TOB2Q14106 344 aaPredicted RBP22.32■■□□□ 1.16
MSLN-207ENST00000566549 TRIM44Q96DX7 344 aaPredicted RBP22.32■■□□□ 1.16
MSLN-207ENST00000566549 IFIT1P09914 478 aaKnown RBP22.32■■□□□ 1.16
MSLN-207ENST00000566549 MTMR6Q9Y217 621 aa22.32■■□□□ 1.16
MSLN-207ENST00000566549 TAF7LQ5H9L4 462 aa22.31■■□□□ 1.16
MSLN-207ENST00000566549 USPL1Q5W0Q7 1092 aa22.31■■□□□ 1.16
MSLN-207ENST00000566549 SLC4A9Q96Q91 983 aa22.31■■□□□ 1.16
MSLN-207ENST00000566549 CEP126Q9P2H0 1117 aa22.31■■□□□ 1.16
MSLN-207ENST00000566549 NHSL1Q5SYE7 1610 aa22.31■■□□□ 1.16
MSLN-207ENST00000566549 CYP21A2P08686 494 aa22.31■■□□□ 1.16
MSLN-207ENST00000566549 LRSAM1Q6UWE0 723 aa22.31■■□□□ 1.16
MSLN-207ENST00000566549 ANP32BQ92688 251 aaKnown RBP22.31■■□□□ 1.16
MSLN-207ENST00000566549 TEX13AQ9BXU3 409 aaPredicted RBP22.31■■□□□ 1.16
MSLN-207ENST00000566549 GPR108Q9NPR9 543 aa22.31■■□□□ 1.16
MSLN-207ENST00000566549 ADORA1P30542 326 aa22.3■■□□□ 1.16
MSLN-207ENST00000566549 VSIG10Q8N0Z9 540 aa22.3■■□□□ 1.16
MSLN-207ENST00000566549 LRRC2Q9BYS8 371 aa22.3■■□□□ 1.16
MSLN-207ENST00000566549 FKBP4Q02790 459 aaKnown RBP eCLIP22.3■■□□□ 1.16
MSLN-207ENST00000566549 CIAO1O76071 339 aa22.29■■□□□ 1.16
MSLN-207ENST00000566549 ANKRD1Q15327 319 aa22.29■■□□□ 1.16
MSLN-207ENST00000566549 GORABQ5T7V8 394 aa22.29■■□□□ 1.16
MSLN-207ENST00000566549 NEK1Q96PY6 1258 aa22.29■■□□□ 1.16
MSLN-207ENST00000566549 ZBTB1Q9Y2K1 713 aa22.29■■□□□ 1.16
MSLN-207ENST00000566549 U3KPZ7 1027 aaPredicted RBP22.29■■□□□ 1.16
MSLN-207ENST00000566549 RFX7Q2KHR2 1363 aa22.29■■□□□ 1.16
MSLN-207ENST00000566549 DNM1Q05193 864 aaKnown RBP22.29■■□□□ 1.16
MSLN-207ENST00000566549 RNF214Q8ND24 703 aa22.29■■□□□ 1.16
MSLN-207ENST00000566549 MAP3K15Q6ZN16 1313 aa22.29■■□□□ 1.16
MSLN-207ENST00000566549 PCCAP05165 728 aaPredicted RBP22.28■■□□□ 1.16
MSLN-207ENST00000566549 TSGA10IPQ3SY00 556 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms