RNA–Protein interactions for RNA: ENST00000566540.5

PMM2-211, Transcript of phosphomannomutase 2, humanhuman

TSL 1 (best)

Gene PMM2, Length 1,557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-211ENST00000566540 CCDC85AQ96PX6 553 aaPredicted RBP18.86■□□□□ 0.61
PMM2-211ENST00000566540 PDZRN3Q9UPQ7 1066 aa18.86■□□□□ 0.61
PMM2-211ENST00000566540 EXOC6BQ9Y2D4 811 aa18.86■□□□□ 0.61
PMM2-211ENST00000566540 MMP10P09238 476 aa18.85■□□□□ 0.61
PMM2-211ENST00000566540 PTPN12Q05209 780 aaKnown RBP18.85■□□□□ 0.61
PMM2-211ENST00000566540 RIC1Q4ADV7 1423 aa18.85■□□□□ 0.61
PMM2-211ENST00000566540 SKAP1Q86WV1 359 aa18.85■□□□□ 0.61
PMM2-211ENST00000566540 CNBD1Q8NA66 436 aa18.85■□□□□ 0.61
PMM2-211ENST00000566540 GREM2Q9H772 168 aa18.85■□□□□ 0.61
PMM2-211ENST00000566540 COPRSQ9NQ92 184 aa18.85■□□□□ 0.61
PMM2-211ENST00000566540 CHMP3Q9Y3E7 222 aa18.85■□□□□ 0.61
PMM2-211ENST00000566540 SURF6O75683 361 aaKnown RBP18.85■□□□□ 0.61
PMM2-211ENST00000566540 HSP90B1P14625 803 aaKnown RBP18.85■□□□□ 0.61
PMM2-211ENST00000566540 GTF2E1P29083 439 aaPredicted RBP18.85■□□□□ 0.61
PMM2-211ENST00000566540 NUCB1Q02818 461 aa18.84■□□□□ 0.61
PMM2-211ENST00000566540 SF3B3Q15393 1217 aaKnown RBP18.84■□□□□ 0.61
PMM2-211ENST00000566540 RTL9Q8NET4 1388 aa18.83■□□□□ 0.61
PMM2-211ENST00000566540 SLC16A10Q8TF71 515 aa18.83■□□□□ 0.6
PMM2-211ENST00000566540 COL4A1P02462 1669 aa18.83■□□□□ 0.6
PMM2-211ENST00000566540 ITGA6P23229 1130 aa18.82■□□□□ 0.6
PMM2-211ENST00000566540 ZNF594Q96JF6 807 aaPredicted RBP18.82■□□□□ 0.6
PMM2-211ENST00000566540 R3HDM1Q15032 1099 aaKnown RBP18.81■□□□□ 0.6
PMM2-211ENST00000566540 CCDC57Q2TAC2 916 aa18.81■□□□□ 0.6
PMM2-211ENST00000566540 ANKRD45Q5TZF3 282 aa18.81■□□□□ 0.6
PMM2-211ENST00000566540 PARP3Q9Y6F1 533 aa18.81■□□□□ 0.6
PMM2-211ENST00000566540 LRP5O75197 1615 aa18.81■□□□□ 0.6
PMM2-211ENST00000566540 APBB1O00213 710 aa18.81■□□□□ 0.6
PMM2-211ENST00000566540 RAB11FIP3O75154 756 aa18.81■□□□□ 0.6
PMM2-211ENST00000566540 IFIT5Q13325 482 aaKnown RBP18.81■□□□□ 0.6
PMM2-211ENST00000566540 CCDC152Q4G0S7 254 aa18.81■□□□□ 0.6
PMM2-211ENST00000566540 CHD1LQ86WJ1 897 aa18.81■□□□□ 0.6
PMM2-211ENST00000566540 NLRP3Q96P20 1036 aa18.81■□□□□ 0.6
PMM2-211ENST00000566540 SIL1Q9H173 461 aa18.81■□□□□ 0.6
PMM2-211ENST00000566540 SEC31BQ9NQW1 1179 aa18.81■□□□□ 0.6
PMM2-211ENST00000566540 ANKRD31Q8N7Z5 1873 aa18.8■□□□□ 0.6
PMM2-211ENST00000566540 ANKRD18BA2A2Z9 1011 aa18.8■□□□□ 0.6
PMM2-211ENST00000566540 NPHP1O15259 732 aa18.8■□□□□ 0.6
PMM2-211ENST00000566540 SMARCA5O60264 1052 aaPredicted RBP18.8■□□□□ 0.6
PMM2-211ENST00000566540 PDE4AP27815 886 aa18.8■□□□□ 0.6
PMM2-211ENST00000566540 ST5P78524 1137 aa18.8■□□□□ 0.6
PMM2-211ENST00000566540 ATG9AQ7Z3C6 839 aa18.8■□□□□ 0.6
PMM2-211ENST00000566540 SASH1O94885 1247 aa18.79■□□□□ 0.6
PMM2-211ENST00000566540 HSP90AB4PQ58FF6 505 aa18.79■□□□□ 0.6
PMM2-211ENST00000566540 RHPN1Q8TCX5 695 aa18.79■□□□□ 0.6
PMM2-211ENST00000566540 PUS3Q9BZE2 481 aaKnown RBP18.79■□□□□ 0.6
PMM2-211ENST00000566540 LNPKQ9C0E8 428 aa18.79■□□□□ 0.6
PMM2-211ENST00000566540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.79■□□□□ 0.6
PMM2-211ENST00000566540 KLRG2A4D1S0 409 aaPredicted RBP18.78■□□□□ 0.6
PMM2-211ENST00000566540 G3BP1Q13283 466 aaKnown RBP eCLIP18.78■□□□□ 0.6
PMM2-211ENST00000566540 LRRC24Q50LG9 513 aa18.78■□□□□ 0.6
PMM2-211ENST00000566540 LRRCC1Q9C099 1032 aa18.78■□□□□ 0.6
PMM2-211ENST00000566540 EYA2O00167 538 aa18.77■□□□□ 0.6
PMM2-211ENST00000566540 CIAO1O76071 339 aa18.77■□□□□ 0.6
PMM2-211ENST00000566540 CRY2Q49AN0 593 aa18.77■□□□□ 0.6
PMM2-211ENST00000566540 PSDA5PKW4 1024 aaPredicted RBP18.76■□□□□ 0.59
PMM2-211ENST00000566540 KIF1BPQ96EK5 621 aa18.76■□□□□ 0.59
PMM2-211ENST00000566540 TAF1P21675 1872 aa18.76■□□□□ 0.59
PMM2-211ENST00000566540 ZBTB7AO95365 584 aa18.76■□□□□ 0.59
PMM2-211ENST00000566540 OS9Q13438 667 aaPredicted RBP18.76■□□□□ 0.59
PMM2-211ENST00000566540 ERC1Q8IUD2 1116 aa18.76■□□□□ 0.59
PMM2-211ENST00000566540 C16orf71Q8IYS4 520 aaPredicted RBP18.76■□□□□ 0.59
PMM2-211ENST00000566540 BRIP1Q9BX63 1249 aa18.76■□□□□ 0.59
PMM2-211ENST00000566540 FBXO3Q9UK99 471 aa18.76■□□□□ 0.59
PMM2-211ENST00000566540 TAF7LQ5H9L4 462 aa18.75■□□□□ 0.59
PMM2-211ENST00000566540 IL1RAPL2Q9NP60 686 aa18.75■□□□□ 0.59
PMM2-211ENST00000566540 RIPOR2Q9Y4F9 1068 aa18.75■□□□□ 0.59
PMM2-211ENST00000566540 SPEF2Q9C093 1822 aa18.74■□□□□ 0.59
PMM2-211ENST00000566540 IL15P40933 162 aaPredicted RBP18.74■□□□□ 0.59
PMM2-211ENST00000566540 TFCP2Q12800 502 aa18.74■□□□□ 0.59
PMM2-211ENST00000566540 OTUD7AQ8TE49 926 aaPredicted RBP18.74■□□□□ 0.59
PMM2-211ENST00000566540 CELF1Q92879 486 aaKnown RBP18.74■□□□□ 0.59
PMM2-211ENST00000566540 MTFR1LQ9H019 292 aa18.74■□□□□ 0.59
PMM2-211ENST00000566540 LDHAL6AQ6ZMR3 332 aa18.73■□□□□ 0.59
PMM2-211ENST00000566540 COL11A2P13942 1736 aaPredicted RBP18.73■□□□□ 0.59
PMM2-211ENST00000566540 SALL3Q9BXA9 1300 aa18.73■□□□□ 0.59
PMM2-211ENST00000566540 RGS3P49796 1198 aa18.72■□□□□ 0.59
PMM2-211ENST00000566540 CDC5LQ99459 802 aaKnown RBP18.72■□□□□ 0.59
PMM2-211ENST00000566540 ATF5Q9Y2D1 282 aaPredicted RBP18.72■□□□□ 0.59
PMM2-211ENST00000566540 HOXA10P31260 410 aaPredicted RBP18.72■□□□□ 0.59
PMM2-211ENST00000566540 C10orf71Q711Q0 1435 aa18.72■□□□□ 0.59
PMM2-211ENST00000566540 IGHMBP2P38935 993 aaKnown RBP18.71■□□□□ 0.59
PMM2-211ENST00000566540 DDX46Q7L014 1031 aaKnown RBP18.71■□□□□ 0.59
PMM2-211ENST00000566540 ANKRD18AQ8IVF6 992 aa18.71■□□□□ 0.59
PMM2-211ENST00000566540 SGIP1Q9BQI5 828 aa18.71■□□□□ 0.59
PMM2-211ENST00000566540 CNNM1Q9NRU3 951 aa18.71■□□□□ 0.59
PMM2-211ENST00000566540 SRGNP10124 158 aa18.7■□□□□ 0.58
PMM2-211ENST00000566540 PDE6BP35913 854 aa18.7■□□□□ 0.58
PMM2-211ENST00000566540 RPS8P62241 208 aaKnown RBP18.7■□□□□ 0.58
PMM2-211ENST00000566540 GRAPQ13588 217 aa18.7■□□□□ 0.58
PMM2-211ENST00000566540 PLEKHM2Q8IWE5 1019 aa18.7■□□□□ 0.58
PMM2-211ENST00000566540 VGLL2Q8N8G2 317 aa18.7■□□□□ 0.58
PMM2-211ENST00000566540 GRAPLQ8TC17 118 aaPredicted RBP18.7■□□□□ 0.58
PMM2-211ENST00000566540 RPGRQ92834 1020 aaKnown RBP18.7■□□□□ 0.58
PMM2-211ENST00000566540 EAF2Q96CJ1 260 aaPredicted RBP18.7■□□□□ 0.58
PMM2-211ENST00000566540 BCL11AQ9H165 835 aa18.7■□□□□ 0.58
PMM2-211ENST00000566540 ZBTB47Q9UFB7 747 aaPredicted RBP18.7■□□□□ 0.58
PMM2-211ENST00000566540 MPHOSPH8Q99549 860 aa18.69■□□□□ 0.58
PMM2-211ENST00000566540 GPR108Q9NPR9 543 aa18.69■□□□□ 0.58
PMM2-211ENST00000566540 BSDC1Q9NW68 430 aaPredicted RBP18.69■□□□□ 0.58
PMM2-211ENST00000566540 A0A1B0GUL6 1792 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms