RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 VEGFAP15692 232 aaPredicted RBP24.65■■□□□ 1.54
CCDC113-204ENST00000566498 SLFN5Q08AF3 891 aa24.65■■□□□ 1.54
CCDC113-204ENST00000566498 SLC51AQ86UW1 340 aa24.65■■□□□ 1.54
CCDC113-204ENST00000566498 DNAAF4Q8WXU2 420 aa24.65■■□□□ 1.54
CCDC113-204ENST00000566498 TIAM2Q8IVF5 1701 aa24.64■■□□□ 1.54
CCDC113-204ENST00000566498 DDX60Q8IY21 1712 aaKnown RBP24.64■■□□□ 1.54
CCDC113-204ENST00000566498 NEURL1BA8MQ27 555 aa24.64■■□□□ 1.54
CCDC113-204ENST00000566498 PDE8AO60658 829 aa24.64■■□□□ 1.54
CCDC113-204ENST00000566498 JDP2Q8WYK2 163 aa24.64■■□□□ 1.54
CCDC113-204ENST00000566498 CDCA7LQ96GN5 454 aa24.63■■□□□ 1.53
CCDC113-204ENST00000566498 TAF1P21675 1872 aa24.63■■□□□ 1.53
CCDC113-204ENST00000566498 DDNO94850 711 aaPredicted RBP24.62■■□□□ 1.53
CCDC113-204ENST00000566498 CCDC152Q4G0S7 254 aa24.62■■□□□ 1.53
CCDC113-204ENST00000566498 DPP8Q6V1X1 898 aaPredicted RBP24.62■■□□□ 1.53
CCDC113-204ENST00000566498 TMC4Q7Z404 712 aa24.62■■□□□ 1.53
CCDC113-204ENST00000566498 MPNDQ8N594 471 aa24.62■■□□□ 1.53
CCDC113-204ENST00000566498 CELF1Q92879 486 aaKnown RBP24.62■■□□□ 1.53
CCDC113-204ENST00000566498 F6X3S4 739 aa24.61■■□□□ 1.53
CCDC113-204ENST00000566498 RPS8P62241 208 aaKnown RBP24.61■■□□□ 1.53
CCDC113-204ENST00000566498 LARGE2Q8N3Y3 721 aa24.61■■□□□ 1.53
CCDC113-204ENST00000566498 SUPT20HQ8NEM7 779 aa24.61■■□□□ 1.53
CCDC113-204ENST00000566498 CCDC85AQ96PX6 553 aaPredicted RBP24.61■■□□□ 1.53
CCDC113-204ENST00000566498 LINS1Q8NG48 757 aa24.6■■□□□ 1.53
CCDC113-204ENST00000566498 GCKRQ14397 625 aa24.59■■□□□ 1.53
CCDC113-204ENST00000566498 UBE3BQ7Z3V4 1068 aa24.59■■□□□ 1.53
CCDC113-204ENST00000566498 SEC31BQ9NQW1 1179 aa24.59■■□□□ 1.53
CCDC113-204ENST00000566498 CDHR2Q9BYE9 1310 aa24.59■■□□□ 1.53
CCDC113-204ENST00000566498 H7C1W4 665 aa24.58■■□□□ 1.53
CCDC113-204ENST00000566498 PPIP5K2O43314 1243 aa24.58■■□□□ 1.53
CCDC113-204ENST00000566498 NSFL1CQ9UNZ2 370 aaKnown RBP24.58■■□□□ 1.53
CCDC113-204ENST00000566498 SNED1Q8TER0 1413 aa24.58■■□□□ 1.53
CCDC113-204ENST00000566498 FZD9O00144 591 aa24.57■■□□□ 1.52
CCDC113-204ENST00000566498 SLC4A10Q6U841 1118 aa24.57■■□□□ 1.52
CCDC113-204ENST00000566498 RBM46Q8TBY0 533 aaKnown RBP24.57■■□□□ 1.52
CCDC113-204ENST00000566498 EIF6P56537 245 aaKnown RBP24.56■■□□□ 1.52
CCDC113-204ENST00000566498 AOC3Q16853 763 aa24.56■■□□□ 1.52
CCDC113-204ENST00000566498 NIM1KQ8IY84 436 aa24.56■■□□□ 1.52
CCDC113-204ENST00000566498 RTFDC1Q9BY42 306 aaPredicted RBP24.56■■□□□ 1.52
CCDC113-204ENST00000566498 VPS33BQ9H267 617 aa24.56■■□□□ 1.52
CCDC113-204ENST00000566498 POTECB2RU33 542 aa24.55■■□□□ 1.52
CCDC113-204ENST00000566498 CTSWP56202 376 aa24.55■■□□□ 1.52
CCDC113-204ENST00000566498 ZNF541Q9H0D2 1346 aa24.55■■□□□ 1.52
CCDC113-204ENST00000566498 TTLL11Q8NHH1 800 aa24.54■■□□□ 1.52
CCDC113-204ENST00000566498 GJA3Q9Y6H8 435 aa24.54■■□□□ 1.52
CCDC113-204ENST00000566498 C6orf229H3BNL8 230 aa24.53■■□□□ 1.52
CCDC113-204ENST00000566498 BEND3Q5T5X7 828 aa24.53■■□□□ 1.52
CCDC113-204ENST00000566498 ANKRD18AQ8IVF6 992 aa24.53■■□□□ 1.52
CCDC113-204ENST00000566498 TRMT2AQ8IZ69 625 aaKnown RBP24.53■■□□□ 1.52
CCDC113-204ENST00000566498 MRPL50Q8N5N7 158 aaKnown RBP24.53■■□□□ 1.52
CCDC113-204ENST00000566498 HSPA6P17066 643 aa24.52■■□□□ 1.52
CCDC113-204ENST00000566498 GPSM2P81274 684 aa24.52■■□□□ 1.52
CCDC113-204ENST00000566498 SSH1Q8WYL5 1049 aa24.52■■□□□ 1.52
CCDC113-204ENST00000566498 IQCA1LA6NCM1 817 aa24.51■■□□□ 1.51
CCDC113-204ENST00000566498 FSTL1Q12841 308 aa24.51■■□□□ 1.51
CCDC113-204ENST00000566498 GPC2Q8N158 579 aa24.51■■□□□ 1.51
CCDC113-204ENST00000566498 CDC5LQ99459 802 aaKnown RBP24.51■■□□□ 1.51
CCDC113-204ENST00000566498 GREM2Q9H772 168 aa24.51■■□□□ 1.51
CCDC113-204ENST00000566498 ANKIB1Q9P2G1 1089 aa24.51■■□□□ 1.51
CCDC113-204ENST00000566498 WDR90Q96KV7 1748 aa24.51■■□□□ 1.51
CCDC113-204ENST00000566498 KIAA2012Q0VF49 1180 aa24.5■■□□□ 1.51
CCDC113-204ENST00000566498 WASHC4Q2M389 1173 aa24.5■■□□□ 1.51
CCDC113-204ENST00000566498 SMC1BQ8NDV3 1235 aa24.5■■□□□ 1.51
CCDC113-204ENST00000566498 BCL2L13Q9BXK5 485 aa24.5■■□□□ 1.51
CCDC113-204ENST00000566498 C9orf78Q9NZ63 289 aaPredicted RBP24.5■■□□□ 1.51
CCDC113-204ENST00000566498 ZNRF3Q9ULT6 936 aa24.5■■□□□ 1.51
CCDC113-204ENST00000566498 RIMBP2O15034 1052 aa24.49■■□□□ 1.51
CCDC113-204ENST00000566498 CASP7P55210 303 aa24.49■■□□□ 1.51
CCDC113-204ENST00000566498 L3MBTL3Q96JM7 780 aaPredicted RBP24.49■■□□□ 1.51
CCDC113-204ENST00000566498 SRCIN1Q9C0H9 1055 aa24.49■■□□□ 1.51
CCDC113-204ENST00000566498 PLA2G12BQ9BX93 195 aa24.48■■□□□ 1.51
CCDC113-204ENST00000566498 POLLQ9UGP5 575 aa24.48■■□□□ 1.51
CCDC113-204ENST00000566498 HACL1Q9UJ83 578 aa24.48■■□□□ 1.51
CCDC113-204ENST00000566498 COL4A5P29400 1685 aa24.47■■□□□ 1.51
CCDC113-204ENST00000566498 ALDH1L1O75891 902 aa24.47■■□□□ 1.51
CCDC113-204ENST00000566498 HNRNPUQ00839 825 aaKnown RBP eCLIP24.47■■□□□ 1.51
CCDC113-204ENST00000566498 ALDH1L2Q3SY69 923 aa24.47■■□□□ 1.51
CCDC113-204ENST00000566498 EYA3Q99504 573 aa24.47■■□□□ 1.51
CCDC113-204ENST00000566498 SMC4Q9NTJ3 1288 aa24.47■■□□□ 1.51
CCDC113-204ENST00000566498 COL4A1P02462 1669 aa24.46■■□□□ 1.51
CCDC113-204ENST00000566498 PTPRCP08575 1304 aa24.46■■□□□ 1.51
CCDC113-204ENST00000566498 MYH3P11055 1940 aa24.46■■□□□ 1.51
CCDC113-204ENST00000566498 GRM8O00222 908 aa24.46■■□□□ 1.51
CCDC113-204ENST00000566498 TBC1D16Q8TBP0 767 aa24.46■■□□□ 1.51
CCDC113-204ENST00000566498 ZC3H12CQ9C0D7 883 aaKnown RBP24.46■■□□□ 1.51
CCDC113-204ENST00000566498 TAF1DQ9H5J8 278 aaPredicted RBP24.46■■□□□ 1.51
CCDC113-204ENST00000566498 G3V3G9 751 aa24.45■■□□□ 1.5
CCDC113-204ENST00000566498 CSF1RP07333 972 aa24.45■■□□□ 1.5
CCDC113-204ENST00000566498 CT47B1P0C2W7 299 aaPredicted RBP24.45■■□□□ 1.5
CCDC113-204ENST00000566498 ITGA6P23229 1130 aa24.45■■□□□ 1.5
CCDC113-204ENST00000566498 CXCL9Q07325 125 aa24.45■■□□□ 1.5
CCDC113-204ENST00000566498 EAPPQ56P03 285 aaPredicted RBP24.45■■□□□ 1.5
CCDC113-204ENST00000566498 DCAF8Q5TAQ9 597 aa24.45■■□□□ 1.5
CCDC113-204ENST00000566498 GGA1Q9UJY5 639 aa24.45■■□□□ 1.5
CCDC113-204ENST00000566498 CHMP3Q9Y3E7 222 aa24.45■■□□□ 1.5
CCDC113-204ENST00000566498 UFL1O94874 794 aa24.44■■□□□ 1.5
CCDC113-204ENST00000566498 LMOD1P29536 600 aaPredicted RBP24.44■■□□□ 1.5
CCDC113-204ENST00000566498 IGHMBP2P38935 993 aaKnown RBP24.44■■□□□ 1.5
CCDC113-204ENST00000566498 GPR101Q96P66 508 aaPredicted RBP24.44■■□□□ 1.5
CCDC113-204ENST00000566498 BSDC1Q9NW68 430 aaPredicted RBP24.44■■□□□ 1.5
CCDC113-204ENST00000566498 PODXL2Q9NZ53 605 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms