RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 CPSF1Q10570 1443 aaKnown RBP12.49□□□□□ -0.41
CFDP1-206ENST00000566254 EXOC5O00471 708 aa12.49□□□□□ -0.41
CFDP1-206ENST00000566254 CSB-PGBD3P0DP91 1061 aa12.49□□□□□ -0.41
CFDP1-206ENST00000566254 LINC01559Q495D7 138 aa12.49□□□□□ -0.41
CFDP1-206ENST00000566254 CARD10Q9BWT7 1032 aa12.49□□□□□ -0.41
CFDP1-206ENST00000566254 USP6P35125 1406 aa12.48□□□□□ -0.41
CFDP1-206ENST00000566254 SKIP12755 728 aa12.48□□□□□ -0.41
CFDP1-206ENST00000566254 PHTF2Q8N3S3 785 aa12.48□□□□□ -0.41
CFDP1-206ENST00000566254 ZNF511Q8NB15 262 aa12.48□□□□□ -0.41
CFDP1-206ENST00000566254 TNS2Q63HR2 1409 aa12.47□□□□□ -0.41
CFDP1-206ENST00000566254 BRD4O60885 1362 aaPredicted RBP12.47□□□□□ -0.41
CFDP1-206ENST00000566254 PPEF1O14829 653 aaPredicted RBP12.47□□□□□ -0.41
CFDP1-206ENST00000566254 CDCA8Q53HL2 280 aa12.47□□□□□ -0.41
CFDP1-206ENST00000566254 BPHLQ86WA6 291 aaPredicted RBP12.47□□□□□ -0.41
CFDP1-206ENST00000566254 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
CFDP1-206ENST00000566254 NLGN2Q8NFZ4 835 aa12.47□□□□□ -0.41
CFDP1-206ENST00000566254 FOXJ1Q92949 421 aa12.47□□□□□ -0.41
CFDP1-206ENST00000566254 CARD14Q9BXL6 1004 aa12.47□□□□□ -0.41
CFDP1-206ENST00000566254 LRRC4BQ9NT99 713 aa12.47□□□□□ -0.41
CFDP1-206ENST00000566254 CABP1Q9NZU7 370 aa12.47□□□□□ -0.41
CFDP1-206ENST00000566254 NHSQ6T4R5 1651 aa12.46□□□□□ -0.41
CFDP1-206ENST00000566254 MAGEB6P1A0A0J9YX57 407 aa12.46□□□□□ -0.41
CFDP1-206ENST00000566254 SLFNL1Q499Z3 407 aa12.46□□□□□ -0.41
CFDP1-206ENST00000566254 C4orf48Q5BLP8 95 aa12.46□□□□□ -0.41
CFDP1-206ENST00000566254 ARHGEF25Q86VW2 580 aa12.46□□□□□ -0.41
CFDP1-206ENST00000566254 PCDH10Q9P2E7 1040 aa12.46□□□□□ -0.41
CFDP1-206ENST00000566254 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
CFDP1-206ENST00000566254 USP17L3A6NCW0 530 aa12.45□□□□□ -0.42
CFDP1-206ENST00000566254 USP17L4A6NCW7 530 aa12.45□□□□□ -0.42
CFDP1-206ENST00000566254 USP17L5A8MUK1 530 aa12.45□□□□□ -0.42
CFDP1-206ENST00000566254 RNF223E7ERA6 249 aa12.45□□□□□ -0.42
CFDP1-206ENST00000566254 ATG7O95352 703 aa12.45□□□□□ -0.42
CFDP1-206ENST00000566254 POLD1P28340 1107 aa12.45□□□□□ -0.42
CFDP1-206ENST00000566254 USP17L2Q6R6M4 530 aa12.45□□□□□ -0.42
CFDP1-206ENST00000566254 USP17L1Q7RTZ2 530 aa12.45□□□□□ -0.42
CFDP1-206ENST00000566254 RNF135Q8IUD6 432 aa12.45□□□□□ -0.42
CFDP1-206ENST00000566254 PLEKHM2Q8IWE5 1019 aa12.45□□□□□ -0.42
CFDP1-206ENST00000566254 GOLGB1Q14789 3259 aaKnown RBP12.45□□□□□ -0.42
CFDP1-206ENST00000566254 YBX3P16989 372 aaKnown RBP eCLIP12.44□□□□□ -0.42
CFDP1-206ENST00000566254 PDE4CQ08493 712 aa12.44□□□□□ -0.42
CFDP1-206ENST00000566254 AGERQ15109 404 aa12.44□□□□□ -0.42
CFDP1-206ENST00000566254 ERFEQ4G0M1 354 aa12.44□□□□□ -0.42
CFDP1-206ENST00000566254 DZIP3Q86Y13 1208 aaKnown RBP12.44□□□□□ -0.42
CFDP1-206ENST00000566254 VRTNQ9H8Y1 702 aa12.44□□□□□ -0.42
CFDP1-206ENST00000566254 CCDC7Q96M83 1385 aa12.43□□□□□ -0.42
CFDP1-206ENST00000566254 RGPD5Q99666 1765 aa12.43□□□□□ -0.42
CFDP1-206ENST00000566254 SH3BP2P78314 561 aa12.43□□□□□ -0.42
CFDP1-206ENST00000566254 NBPF1Q3BBV0 1214 aa12.43□□□□□ -0.42
CFDP1-206ENST00000566254 TRPM1Q7Z4N2 1603 aa12.43□□□□□ -0.42
CFDP1-206ENST00000566254 ABCC6O95255 1503 aa12.42□□□□□ -0.42
CFDP1-206ENST00000566254 PNPLA7Q6ZV29 1317 aa12.42□□□□□ -0.42
CFDP1-206ENST00000566254 CENPJQ9HC77 1338 aaPredicted RBP12.42□□□□□ -0.42
CFDP1-206ENST00000566254 DEPDC4Q8N2C3 294 aa12.42□□□□□ -0.42
CFDP1-206ENST00000566254 ANKLE1Q8NAG6 615 aa12.42□□□□□ -0.42
CFDP1-206ENST00000566254 KCNH5Q8NCM2 988 aa12.42□□□□□ -0.42
CFDP1-206ENST00000566254 SLC16A10Q8TF71 515 aa12.42□□□□□ -0.42
CFDP1-206ENST00000566254 C1QTNF2Q9BXJ5 285 aa12.42□□□□□ -0.42
CFDP1-206ENST00000566254 PODXL2Q9NZ53 605 aa12.42□□□□□ -0.42
CFDP1-206ENST00000566254 USTQ9Y2C2 406 aa12.42□□□□□ -0.42
CFDP1-206ENST00000566254 ATP10DQ9P241 1426 aa12.42□□□□□ -0.42
CFDP1-206ENST00000566254 BTAF1O14981 1849 aa12.41□□□□□ -0.42
CFDP1-206ENST00000566254 GGCXP38435 758 aa12.41□□□□□ -0.42
CFDP1-206ENST00000566254 KCNQ4P56696 695 aa12.41□□□□□ -0.42
CFDP1-206ENST00000566254 PLA2G2CQ5R387 149 aa12.41□□□□□ -0.42
CFDP1-206ENST00000566254 PLPP7Q8NBV4 271 aa12.41□□□□□ -0.42
CFDP1-206ENST00000566254 ZBTB24O43167 697 aaPredicted RBP12.4□□□□□ -0.42
CFDP1-206ENST00000566254 GRIN3BO60391 1043 aa12.4□□□□□ -0.42
CFDP1-206ENST00000566254 HSPA6P17066 643 aa12.4□□□□□ -0.42
CFDP1-206ENST00000566254 KCTD17Q8N5Z5 321 aa12.4□□□□□ -0.42
CFDP1-206ENST00000566254 TFCP2L1Q9NZI6 479 aa12.4□□□□□ -0.42
CFDP1-206ENST00000566254 QRICH2Q9H0J4 1663 aa12.4□□□□□ -0.42
CFDP1-206ENST00000566254 TTC21BQ7Z4L5 1316 aa12.39□□□□□ -0.43
CFDP1-206ENST00000566254 NFAT5O94916 1531 aa12.39□□□□□ -0.43
CFDP1-206ENST00000566254 LZTS3O60299 673 aaPredicted RBP12.39□□□□□ -0.43
CFDP1-206ENST00000566254 TRIM32Q13049 653 aa12.39□□□□□ -0.43
CFDP1-206ENST00000566254 MAP7D1Q3KQU3 841 aa12.39□□□□□ -0.43
CFDP1-206ENST00000566254 ZNF526Q8TF50 670 aaPredicted RBP12.39□□□□□ -0.43
CFDP1-206ENST00000566254 NLRP2Q9NX02 1062 aa12.39□□□□□ -0.43
CFDP1-206ENST00000566254 COL24A1Q17RW2 1714 aa12.38□□□□□ -0.43
CFDP1-206ENST00000566254 IL2RBP14784 551 aa12.38□□□□□ -0.43
CFDP1-206ENST00000566254 NCOA4Q13772 614 aa12.38□□□□□ -0.43
CFDP1-206ENST00000566254 SLC10A4Q96EP9 437 aa12.38□□□□□ -0.43
CFDP1-206ENST00000566254 MKRN1Q9UHC7 482 aaKnown RBP12.38□□□□□ -0.43
CFDP1-206ENST00000566254 KIAA1210Q9ULL0 1709 aa12.37□□□□□ -0.43
CFDP1-206ENST00000566254 TSGA10IPQ3SY00 556 aa12.37□□□□□ -0.43
CFDP1-206ENST00000566254 SLC27A3Q5K4L6 730 aa12.37□□□□□ -0.43
CFDP1-206ENST00000566254 PPP1R18Q6NYC8 613 aa12.37□□□□□ -0.43
CFDP1-206ENST00000566254 TRAF7Q6Q0C0 670 aa12.37□□□□□ -0.43
CFDP1-206ENST00000566254 TRMT44Q8IYL2 757 aaKnown RBP12.37□□□□□ -0.43
CFDP1-206ENST00000566254 NEUROD1Q13562 356 aa12.36□□□□□ -0.43
CFDP1-206ENST00000566254 ELOAQ14241 798 aaKnown RBP12.36□□□□□ -0.43
CFDP1-206ENST00000566254 CCDC85AQ96PX6 553 aaPredicted RBP12.36□□□□□ -0.43
CFDP1-206ENST00000566254 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.36□□□□□ -0.43
CFDP1-206ENST00000566254 TUBGCP6Q96RT7 1819 aa12.36□□□□□ -0.43
CFDP1-206ENST00000566254 QSER1Q2KHR3 1735 aa12.36□□□□□ -0.43
CFDP1-206ENST00000566254 SKOR1P84550 965 aa12.35□□□□□ -0.43
CFDP1-206ENST00000566254 MSL1Q68DK7 614 aa12.35□□□□□ -0.43
CFDP1-206ENST00000566254 TTC21AQ8NDW8 1320 aa12.35□□□□□ -0.43
CFDP1-206ENST00000566254 ADCY9O60503 1353 aa12.34□□□□□ -0.43
CFDP1-206ENST00000566254 CARNS1A5YM72 827 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms