RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 MAP3K7CLP57077 242 aa12.15□□□□□ -0.47
SNX29-205ENST00000566228 GLRX3O76003 335 aaKnown RBP12.14□□□□□ -0.47
SNX29-205ENST00000566228 CETN3O15182 167 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 TSNAXIP1Q2TAA8 658 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 ZSCAN16Q9H4T2 348 aaPredicted RBP12.14□□□□□ -0.47
SNX29-205ENST00000566228 GSTO1P78417 241 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 HYPKQ9NX55 129 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 KLHL10Q6JEL2 608 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 SDCCAG8Q86SQ7 713 aaPredicted RBP12.14□□□□□ -0.47
SNX29-205ENST00000566228 SUDS3Q9H7L9 328 aaPredicted RBP12.14□□□□□ -0.47
SNX29-205ENST00000566228 GOLGA6CA6NDK9 693 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 GOLGA6BA6NDN3 693 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 GOLGA6DP0CG33 693 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 CHMP4BP1P59074 171 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 RAB11FIP4Q86YS3 637 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 GOLGA6AQ9NYA3 693 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 ANKIB1Q9P2G1 1089 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 RASSF2P50749 326 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 CALM1P0DP23 149 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 CALM2P0DP24 149 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 CALM3P0DP25 149 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 GNAQP50148 359 aa12.14□□□□□ -0.47
SNX29-205ENST00000566228 SLC5A1P13866 664 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 ATP2A3Q93084 1043 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 GOLGA8QA0A0J9YX86 632 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 GOLGA8OA6NCC3 632 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 GOLGA8NF8WBI6 632 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 MYCNP04198 464 aaPredicted RBP12.13□□□□□ -0.47
SNX29-205ENST00000566228 KRT83P78385 493 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 RPGRQ92834 1020 aaKnown RBP12.13□□□□□ -0.47
SNX29-205ENST00000566228 ANKFY1Q9P2R3 1169 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 GIGYF1O75420 1035 aaPredicted RBP12.13□□□□□ -0.47
SNX29-205ENST00000566228 INPP1P49441 399 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 TMTC2Q8N394 836 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 CCT6AP40227 531 aaKnown RBP12.13□□□□□ -0.47
SNX29-205ENST00000566228 MTHFSP49914 203 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 NEDD9Q14511 834 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 LGSNQ5TDP6 509 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 AACSQ86V21 672 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 NSMCE1Q8WV22 266 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 PRIMPOLQ96LW4 560 aa12.13□□□□□ -0.47
SNX29-205ENST00000566228 ZC3H15Q8WU90 426 aaKnown RBP12.13□□□□□ -0.47
SNX29-205ENST00000566228 CTAGE9A4FU28 777 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 BRDTQ58F21 947 aaPredicted RBP12.12□□□□□ -0.47
SNX29-205ENST00000566228 NKIRAS1Q9NYS0 192 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 NESP48681 1621 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 GOLGA8AA7E2F4 631 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 GOLGA8BA8MQT2 603 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 PFDN6O15212 129 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 CKAP2LQ8IYA6 745 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 AQRO60306 1485 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNX29-205ENST00000566228 PLCB4Q15147 1175 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 INTS8Q75QN2 995 aaKnown RBP12.12□□□□□ -0.47
SNX29-205ENST00000566228 EXOC6Q8TAG9 804 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 ANKRD24Q8TF21 1146 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 PPP1R2P41236 205 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 PPFIA1Q13136 1202 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 STK3Q13188 491 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 PDCD2Q16342 344 aaPredicted RBP12.12□□□□□ -0.47
SNX29-205ENST00000566228 WHAMMQ8TF30 809 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 KIF1BPQ96EK5 621 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 CALML3P27482 149 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 CCDC62Q6P9F0 684 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 KIFAP3Q92845 792 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 JAKMIP1Q96N16 626 aaKnown RBP12.12□□□□□ -0.47
SNX29-205ENST00000566228 AKR1B10O60218 316 aa12.12□□□□□ -0.47
SNX29-205ENST00000566228 SNW1Q13573 536 aaKnown RBP12.12□□□□□ -0.47
SNX29-205ENST00000566228 TOM1L2Q6ZVM7 507 aa12.11□□□□□ -0.47
SNX29-205ENST00000566228 CCDC124Q96CT7 223 aaKnown RBP12.11□□□□□ -0.47
SNX29-205ENST00000566228 KRT86O43790 486 aa12.11□□□□□ -0.47
SNX29-205ENST00000566228 IDH1O75874 414 aaKnown RBP12.11□□□□□ -0.47
SNX29-205ENST00000566228 MCM10Q7L590 875 aa12.11□□□□□ -0.47
SNX29-205ENST00000566228 CPLX4Q7Z7G2 160 aa12.11□□□□□ -0.47
SNX29-205ENST00000566228 TRIML1Q8N9V2 468 aa12.11□□□□□ -0.47
SNX29-205ENST00000566228 ABCF2Q9UG63 623 aa12.11□□□□□ -0.47
SNX29-205ENST00000566228 XPCQ01831 940 aaPredicted RBP12.11□□□□□ -0.47
SNX29-205ENST00000566228 METTL24Q5JXM2 366 aa12.11□□□□□ -0.47
SNX29-205ENST00000566228 STK24Q9Y6E0 443 aa12.11□□□□□ -0.47
SNX29-205ENST00000566228 GAPVD1Q14C86 1478 aa12.11□□□□□ -0.47
SNX29-205ENST00000566228 GOLGA8CPA6NN73 597 aa12.11□□□□□ -0.47
SNX29-205ENST00000566228 VAV2P52735 878 aa12.11□□□□□ -0.47
SNX29-205ENST00000566228 KDM4AO75164 1064 aa12.11□□□□□ -0.47
SNX29-205ENST00000566228 C16orf71Q8IYS4 520 aaPredicted RBP12.11□□□□□ -0.47
SNX29-205ENST00000566228 HMOX1P09601 288 aa12.1□□□□□ -0.47
SNX29-205ENST00000566228 RBM10P98175 930 aaKnown RBP12.1□□□□□ -0.47
SNX29-205ENST00000566228 KRT23Q9C075 422 aa12.1□□□□□ -0.47
SNX29-205ENST00000566228 C6orf50Q9HD87 102 aa12.1□□□□□ -0.47
SNX29-205ENST00000566228 RBM28Q9NW13 759 aaKnown RBP12.1□□□□□ -0.47
SNX29-205ENST00000566228 TPCN1Q9ULQ1 816 aa12.1□□□□□ -0.47
SNX29-205ENST00000566228 BICDL2A1A5D9 508 aa12.1□□□□□ -0.47
SNX29-205ENST00000566228 RNF8O76064 485 aa12.1□□□□□ -0.47
SNX29-205ENST00000566228 TWISTNBQ3B726 338 aaPredicted RBP12.1□□□□□ -0.47
SNX29-205ENST00000566228 ATRIPQ8WXE1 791 aa12.1□□□□□ -0.47
SNX29-205ENST00000566228 CCDC114Q96M63 670 aa12.1□□□□□ -0.47
SNX29-205ENST00000566228 TSPYL2Q9H2G4 693 aaPredicted RBP12.1□□□□□ -0.47
SNX29-205ENST00000566228 RAD54L2Q9Y4B4 1467 aa12.1□□□□□ -0.47
SNX29-205ENST00000566228 HSPA8P11142 646 aaKnown RBP12.1□□□□□ -0.47
SNX29-205ENST00000566228 TAF7Q15545 349 aaPredicted RBP12.1□□□□□ -0.47
SNX29-205ENST00000566228 SLC4A8Q2Y0W8 1093 aa12.1□□□□□ -0.47
SNX29-205ENST00000566228 EVI5LQ96CN4 794 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 636.7 ms