RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 ARFGEF1Q9Y6D6 1849 aa15.87■□□□□ 0.13
SHCBP1-204ENST00000565887 CSF1RP07333 972 aa15.86■□□□□ 0.13
SHCBP1-204ENST00000565887 CASP7P55210 303 aa15.86■□□□□ 0.13
SHCBP1-204ENST00000565887 RPS8P62241 208 aaKnown RBP15.86■□□□□ 0.13
SHCBP1-204ENST00000565887 CCDC93Q567U6 631 aa15.86■□□□□ 0.13
SHCBP1-204ENST00000565887 C3orf67Q6ZVT6 689 aa15.86■□□□□ 0.13
SHCBP1-204ENST00000565887 SP8Q8IXZ3 490 aa15.86■□□□□ 0.13
SHCBP1-204ENST00000565887 TTLL11Q8NHH1 800 aa15.86■□□□□ 0.13
SHCBP1-204ENST00000565887 YTHDC1Q96MU7 727 aaKnown RBP15.86■□□□□ 0.13
SHCBP1-204ENST00000565887 CDC5LQ99459 802 aaKnown RBP15.86■□□□□ 0.13
SHCBP1-204ENST00000565887 PPEF1O14829 653 aaPredicted RBP15.85■□□□□ 0.13
SHCBP1-204ENST00000565887 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.85■□□□□ 0.13
SHCBP1-204ENST00000565887 JARID2Q92833 1246 aaPredicted RBP15.85■□□□□ 0.13
SHCBP1-204ENST00000565887 ATP6V0A2Q9Y487 856 aa15.85■□□□□ 0.13
SHCBP1-204ENST00000565887 RTL9Q8NET4 1388 aa15.85■□□□□ 0.13
SHCBP1-204ENST00000565887 TRIM27P14373 513 aa15.84■□□□□ 0.13
SHCBP1-204ENST00000565887 USP44Q9H0E7 712 aa15.84■□□□□ 0.13
SHCBP1-204ENST00000565887 VPS33BQ9H267 617 aa15.84■□□□□ 0.13
SHCBP1-204ENST00000565887 ABCC4O15439 1325 aa15.84■□□□□ 0.13
SHCBP1-204ENST00000565887 LTBP3Q9NS15 1303 aa15.84■□□□□ 0.13
SHCBP1-204ENST00000565887 GNAI3P08754 354 aa15.83■□□□□ 0.12
SHCBP1-204ENST00000565887 ANKRD18AQ8IVF6 992 aa15.83■□□□□ 0.12
SHCBP1-204ENST00000565887 FTSJ3Q8IY81 847 aaKnown RBP15.83■□□□□ 0.12
SHCBP1-204ENST00000565887 DZIP1LQ8IYY4 767 aaKnown RBP15.83■□□□□ 0.12
SHCBP1-204ENST00000565887 COL11A2P13942 1736 aaPredicted RBP15.82■□□□□ 0.12
SHCBP1-204ENST00000565887 SLX4Q8IY92 1834 aa15.82■□□□□ 0.12
SHCBP1-204ENST00000565887 NBPF7P0C2Y1 421 aaPredicted RBP15.82■□□□□ 0.12
SHCBP1-204ENST00000565887 LMNB1P20700 586 aa15.82■□□□□ 0.12
SHCBP1-204ENST00000565887 IFIT5Q13325 482 aaKnown RBP15.82■□□□□ 0.12
SHCBP1-204ENST00000565887 SUPT20HQ8NEM7 779 aa15.82■□□□□ 0.12
SHCBP1-204ENST00000565887 PSMD1Q99460 953 aa15.82■□□□□ 0.12
SHCBP1-204ENST00000565887 TAOK3Q9H2K8 898 aa15.82■□□□□ 0.12
SHCBP1-204ENST00000565887 ZNF219Q9P2Y4 722 aaPredicted RBP15.82■□□□□ 0.12
SHCBP1-204ENST00000565887 TNRC6CQ9HCJ0 1690 aaKnown RBP15.82■□□□□ 0.12
SHCBP1-204ENST00000565887 DDX60Q8IY21 1712 aaKnown RBP15.82■□□□□ 0.12
SHCBP1-204ENST00000565887 ANKRD18BA2A2Z9 1011 aa15.81■□□□□ 0.12
SHCBP1-204ENST00000565887 UBTFL1P0CB47 393 aaPredicted RBP15.81■□□□□ 0.12
SHCBP1-204ENST00000565887 IGHMBP2P38935 993 aaKnown RBP15.81■□□□□ 0.12
SHCBP1-204ENST00000565887 LAMB2P55268 1798 aa15.81■□□□□ 0.12
SHCBP1-204ENST00000565887 FOXO4P98177 505 aa15.81■□□□□ 0.12
SHCBP1-204ENST00000565887 FKBP4Q02790 459 aaKnown RBP eCLIP15.81■□□□□ 0.12
SHCBP1-204ENST00000565887 CHD4Q14839 1912 aa15.81■□□□□ 0.12
SHCBP1-204ENST00000565887 CCDC57Q2TAC2 916 aa15.81■□□□□ 0.12
SHCBP1-204ENST00000565887 CHMP4BQ9H444 224 aaKnown RBP15.81■□□□□ 0.12
SHCBP1-204ENST00000565887 BSDC1Q9NW68 430 aaPredicted RBP15.81■□□□□ 0.12
SHCBP1-204ENST00000565887 LMBR1LQ6UX01 489 aa15.8■□□□□ 0.12
SHCBP1-204ENST00000565887 MPNDQ8N594 471 aa15.8■□□□□ 0.12
SHCBP1-204ENST00000565887 CELF1Q92879 486 aaKnown RBP15.8■□□□□ 0.12
SHCBP1-204ENST00000565887 ZC3H4Q9UPT8 1303 aaKnown RBP15.79■□□□□ 0.12
SHCBP1-204ENST00000565887 MYH3P11055 1940 aa15.79■□□□□ 0.12
SHCBP1-204ENST00000565887 ITGA6P23229 1130 aa15.79■□□□□ 0.12
SHCBP1-204ENST00000565887 YY1P25490 414 aa15.79■□□□□ 0.12
SHCBP1-204ENST00000565887 CLUAP1Q96AJ1 413 aa15.79■□□□□ 0.12
SHCBP1-204ENST00000565887 MPHOSPH8Q99549 860 aa15.79■□□□□ 0.12
SHCBP1-204ENST00000565887 GREM2Q9H772 168 aa15.79■□□□□ 0.12
SHCBP1-204ENST00000565887 SEC31BQ9NQW1 1179 aa15.79■□□□□ 0.12
SHCBP1-204ENST00000565887 NFKBIEO00221 500 aa15.78■□□□□ 0.12
SHCBP1-204ENST00000565887 PDE3AQ14432 1141 aa15.78■□□□□ 0.12
SHCBP1-204ENST00000565887 RABL6Q3YEC7 729 aaPredicted RBP15.78■□□□□ 0.12
SHCBP1-204ENST00000565887 DPP8Q6V1X1 898 aaPredicted RBP15.78■□□□□ 0.12
SHCBP1-204ENST00000565887 SUCLG2Q96I99 432 aa15.78■□□□□ 0.12
SHCBP1-204ENST00000565887 CCDC85AQ96PX6 553 aaPredicted RBP15.78■□□□□ 0.12
SHCBP1-204ENST00000565887 CHMP3Q9Y3E7 222 aa15.78■□□□□ 0.12
SHCBP1-204ENST00000565887 GOLGB1Q14789 3259 aaKnown RBP15.78■□□□□ 0.12
SHCBP1-204ENST00000565887 TAF7LQ5H9L4 462 aa15.77■□□□□ 0.12
SHCBP1-204ENST00000565887 C9orf131Q5VYM1 1079 aa15.77■□□□□ 0.12
SHCBP1-204ENST00000565887 RTFDC1Q9BY42 306 aaPredicted RBP15.77■□□□□ 0.12
SHCBP1-204ENST00000565887 RNF181Q9P0P0 153 aa15.77■□□□□ 0.12
SHCBP1-204ENST00000565887 FAM161AQ3B820 660 aa15.76■□□□□ 0.11
SHCBP1-204ENST00000565887 EPHA10Q5JZY3 1008 aa15.76■□□□□ 0.11
SHCBP1-204ENST00000565887 TMEM57Q8N5G2 664 aa15.76■□□□□ 0.11
SHCBP1-204ENST00000565887 KAZALD1Q96I82 304 aa15.76■□□□□ 0.11
SHCBP1-204ENST00000565887 EYA3Q99504 573 aa15.76■□□□□ 0.11
SHCBP1-204ENST00000565887 ANKRD2Q9GZV1 360 aa15.76■□□□□ 0.11
SHCBP1-204ENST00000565887 BICC1Q9H694 974 aaKnown RBP15.76■□□□□ 0.11
SHCBP1-204ENST00000565887 PODXL2Q9NZ53 605 aa15.76■□□□□ 0.11
SHCBP1-204ENST00000565887 ANKIB1Q9P2G1 1089 aa15.76■□□□□ 0.11
SHCBP1-204ENST00000565887 NSFL1CQ9UNZ2 370 aaKnown RBP15.76■□□□□ 0.11
SHCBP1-204ENST00000565887 FER1L6Q2WGJ9 1857 aa15.76■□□□□ 0.11
SHCBP1-204ENST00000565887 GNAI2P04899 355 aa15.75■□□□□ 0.11
SHCBP1-204ENST00000565887 JDP2Q8WYK2 163 aa15.75■□□□□ 0.11
SHCBP1-204ENST00000565887 CACNA1SQ13698 1873 aa15.75■□□□□ 0.11
SHCBP1-204ENST00000565887 ATP2B4P23634 1241 aa15.74■□□□□ 0.11
SHCBP1-204ENST00000565887 IARSP41252 1262 aaKnown RBP15.74■□□□□ 0.11
SHCBP1-204ENST00000565887 RASSF7Q02833 373 aa15.74■□□□□ 0.11
SHCBP1-204ENST00000565887 DPY19L2Q6NUT2 758 aa15.74■□□□□ 0.11
SHCBP1-204ENST00000565887 LDHAL6AQ6ZMR3 332 aa15.74■□□□□ 0.11
SHCBP1-204ENST00000565887 ITPRIPQ8IWB1 547 aa15.74■□□□□ 0.11
SHCBP1-204ENST00000565887 MEIS3Q99687 375 aa15.74■□□□□ 0.11
SHCBP1-204ENST00000565887 FBXO3Q9UK99 471 aa15.74■□□□□ 0.11
SHCBP1-204ENST00000565887 MINPP1Q9UNW1 487 aa15.74■□□□□ 0.11
SHCBP1-204ENST00000565887 XDHP47989 1333 aa15.73■□□□□ 0.11
SHCBP1-204ENST00000565887 ZBTB7BO15156 539 aaPredicted RBP15.73■□□□□ 0.11
SHCBP1-204ENST00000565887 OLFM4Q6UX06 510 aa15.73■□□□□ 0.11
SHCBP1-204ENST00000565887 ANKRD44Q8N8A2 993 aa15.73■□□□□ 0.11
SHCBP1-204ENST00000565887 GGA1Q9UJY5 639 aa15.73■□□□□ 0.11
SHCBP1-204ENST00000565887 DDX19BQ9UMR2 479 aa15.73■□□□□ 0.11
SHCBP1-204ENST00000565887 LEMD3Q9Y2U8 911 aa15.73■□□□□ 0.11
SHCBP1-204ENST00000565887 SBF1O95248 1867 aa15.72■□□□□ 0.11
SHCBP1-204ENST00000565887 SNED1Q8TER0 1413 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms